Pocillopora damicornis (lace coral): 113667510
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Entry
113667510 CDS
T05773
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113667510
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113667510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Ion_trans
Ank_KRIT1
PKD_channel
ADIP
Motif
Other DBs
NCBI-GeneID:
113667510
NCBI-ProteinID:
XP_027039136
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MQSSLGTSSGLRVESFFPASENETDTDSDSGAFSNNRSRRSTNEEGNRLSTPELIRHAFN
LAVIKGRINLRFNNRDHHGGLHKAVLNGKEADVEQLLSSGKDIDAHDEYGKTPLHCAVGA
QKLDIVHCLLRYKPDVDAHDDRDDTALHTATRTGNFDIVLALLREGHANPNAVGNSGCNP
LHIAAHLDHVNSVAICKLLLQYNAKILARDHKNMTPIAHAALHGCYDVMVCLFHYSKGQG
ISRDDVLLHVDNTDSTLLHLAVESGVAKVVELCLEEGAGPNAVKSSDGSTPVHLASSYGY
MDILDILMKAVAFILDPPPDQDGMLPIHKAAQSNHSEVISYLLKQDMDQINATDHERRTP
VMLAAQCNCFETAKVLLEHGANVDVRDSENKTVLHYAIGSSDIVKEILKDVKASALIRAK
DRLGNTPLHYAACKGCVKDASIILMKYRAGATITNGSGETPLHIAARYGCTSVAKKLMEG
RGKRTVNGNDVYERTPLHLAAQQGHDELVEFFLKRGAKIDSDVHGQTPLHYAALQGSKRS
AELILASKPESLNVTDKNQNTALHMAAKGGHAEILKYLLSKSEQLVSVNERNQNILDIAI
EARQEAVAMGIVEHRRWKEVLRSTTHGSHTQIQLLVQHMPEVAKKFLDRCIVEEGDPEDE
NYKVSYDLRFIQGMPDEKRKEKNAKESLSALHTMVKYQRLQCLTHTLCSVLMDIKWRKFG
LVCALLNQIVYILFVLLLMIMMKKQVDAKHTSGTDPLIALCFKDSWIHASVSVFLIIACG
YNLAKELFQMFDEGVKYLFTLNNWLEVTLYVLTLVTLVRPRSEDISEMGICVFLVWIVLL
QYISKFNYVGLYIVMITKTIKTVSKVMVILLILLAAFAFSLYVVVPKDESDAGNRRFHNI
SSSFAATFFMMLDNLQYDNILLNYDSEDSGVGNGLVLYVLYIAYCFMMPIIFLNLLIGLA
VGDIDTIRKTAALERYTSQVEHLSQLERAIPTFILNSVLVTEYVEYPNKPKNFKTKIVDI
LVKLLSPRQENDEKQEIAEDLRETIERHDEQLREITSSIKKQSALLEELRDIFMDKKRRP
KREEPAEQYPDGTEFYV
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttccctggggacgtctagcggtttgagggtcgaatctttttttcccgcatca
gagaacgaaacagacactgatagcgactctggtgccttttcaaacaatcgaagtcgaaga
tcaacaaacgaagaaggaaatcgactctctacaccagaacttattcgacacgcgttcaat
ctagctgtgataaagggaagaatcaatttacggtttaacaatcgagatcatcatggcggg
cttcataaagctgtattgaatgggaaggaggctgacgtagagcaacttctctcctccgga
aaagacatagatgcgcatgatgagtatgggaagacaccactgcattgtgccgtgggggct
cagaagcttgatattgttcattgtcttctccgctacaaacctgatgtggatgctcatgac
gacagagatgacacagcgctacacactgcaacaaggacgggaaactttgatatagtactg
gcgttgctacgtgaagggcacgccaacccaaatgctgtgggaaattccggatgcaacccg
ctacacattgccgctcatttggatcacgtgaacagcgtcgccatctgtaaactgctgttg
caatataatgctaagatactggcacgtgaccataagaatatgacacctattgcgcatgct
gccttacacggctgttatgacgtcatggtctgcctcttccattactcaaaaggtcaaggg
atttcacgtgatgatgttctcttgcatgttgataacactgacagtacattgcttcatctg
gcagtagaaagtggagtcgctaaggttgtcgagctttgtcttgaagaaggagcaggacca
aatgcagtgaagtcatctgatggcagtacgccagttcatttagcttcctcatacgggtac
atggacatccttgatattttgatgaaggctgtggcattcatactggatccgcctcctgat
caagatggaatgttgcccattcacaaggctgctcagtcaaaccattcagaagtaatctct
tacctcctcaagcaggatatggatcaaatcaatgcaacagaccacgaacgccgcacacct
gtgatgttagcggcacagtgtaattgttttgagaccgccaaagttcttcttgaacacgga
gctaatgtggacgtcagagactccgaaaataaaacagttttacactacgctattggaagc
tctgatattgtcaaggaaatcctcaaagatgttaaagcgagtgcactcatccgagccaag
gaccgacttggaaacacccctcttcactatgctgcgtgtaaaggatgtgttaaggacgcg
tcaatcattttgatgaagtaccgagcgggagctaccatcacaaatggttcgggggagacg
ccgttacacattgctgcaaggtacggctgcacatctgttgctaagaagctgatggaagga
cgtggaaagcggacggttaatggtaatgacgtttatgagagaacgccactccatctggca
gcacaacaaggccatgacgaactggttgagtttttcctcaaaaggggggcaaaaattgac
agtgacgtacatggtcaaacacccttacactatgcagctctgcaaggatcgaaaagatca
gctgaactcatcttagcgagtaagcctgagagtctgaatgttaccgacaaaaaccagaac
acagcgcttcacatggcagccaaaggtggccacgcagaaatcctgaaatacctgctttcc
aaatcagaacaacttgtgtcagtgaatgagagaaaccaaaatatcttggatattgccatt
gaagctaggcaagaagccgttgccatgggaattgttgaacatagaaggtggaaagaagtg
cttagaagtacaacacacggttcacatactcagatacagcttctagttcaacacatgcct
gaagtggcaaagaaatttctcgatcgctgtattgtggaggagggcgatccagaggacgaa
aattataaggtctcgtacgatcttcggtttattcaaggaatgcccgatgaaaaaagaaaa
gaaaagaacgctaaggaatctcttagtgctctccatacgatggtaaaatatcaacgactc
cagtgtctcacacatactctatgttcagtgcttatggacatcaaatggcgaaaatttggc
ttggtctgcgcattactgaaccagattgtttacattttgtttgtgttgctgttgatgata
atgatgaaaaaacaagttgatgcaaaacatacatcgggaaccgacccattgatagcgctg
tgttttaaagacagctggattcatgccagtgtgtcagtgttcctcataatagcgtgtgga
tacaatttggctaaagaactttttcagatgtttgatgaaggtgtaaagtatttgtttacg
cttaacaactggcttgaggtgaccctgtatgtcctgacgttagtcacgcttgtcagacca
cgttccgaggatatctctgaaatgggaatctgtgtttttctggtgtggattgtcttacta
cagtatattagcaaattcaattacgttggattgtatatcgtgatgatcacgaagacaata
aaaacagtttccaaagttatggttattcttcttattcttctggctgcgtttgcattttct
ctctacgtcgtggttccaaaagacgagagcgacgcaggaaatcgtcgctttcacaacatt
tcttcctcattcgctgctacattctttatgatgctggataatttgcaatatgacaacatc
cttctgaattacgatagcgaggacagcggtgtaggcaatggcttggtgctgtatgtgttg
tatattgcatactgcttcatgatgccgataatattcctgaacttactgatcggtttggct
gttggagatattgacactattcgaaagacagctgcactggagagatacacgagtcaggtg
gagcacctgtctcaactagagcgcgccataccaaccttcatcctcaatagtgtcctggtc
actgaatatgtagaatatcccaacaaaccaaagaatttcaagaccaagattgtggacata
ctcgtaaaacttttgtctcctcgccaagagaacgatgagaaacaagaaattgcggaagat
ctcagagagactattgaacgacatgatgaacagttgagagaaataacttcatctataaag
aagcaaagcgcattacttgaagaacttcgggacatcttcatggataaaaagcgaagacct
aagcgggaagagccagcagaacagtatccagacggaactgaattttacgtctaa
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