Pocillopora damicornis (lace coral): 113667642
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Entry
113667642 CDS
T05773
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113667642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113667642
Enzymes [BR:
pdam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113667642
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113667642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
113667642
NCBI-ProteinID:
XP_027039305
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MHQYAHIHCVSKNLYNQDQSRTPVPFGVLDSHMGTSTKDRSCETCGKPLADCVGHYGYLD
LELPIFHVGFFRSTIVILQSICKTCARVLLPPQEKKQFLDQLSRSGVSSLMRKSLKKKIV
EKCKKISHCPYCETLNGNSLLDIFIQILLTKLCLFPKKGSRGFVQRLKGKQGRFRGNLSG
KRVDYSGRTVISPDPNLHIDQVAVPVHVAKVLTYPERVTEANIQLMKQLILNGADKHPGA
NFIQQRQTNIRKFLKYGNRKQIIKELKYGDIVERHLMDGDVVLFNRQPSLHKLSIMAHQA
VVRPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALTLMGVKSNLVTPRNGEPL
IAAIQDFITGAYLLTQKDVFLDRSHISQLLAYILAGKDVNIRIDLPRPVILKPVKLWTGK
QVFNVILRPNMDMPIKMNLRTKGKQYTSGEDLCFKDSYVVIHNSELMCGALDKAVLGSGS
KNSIFYVLLRDFGGQVTARKIMKMCXCNFFIGNRGFSIGIGDVTPGHGLLQAKDELLDNG
YSKCDSFIQDFKEGKLQTQPGCSADDTLEAVILKELSVIRDHAGKACLHELHKTNSPLTM
AVCGSKGSFINISQMIACVGQQAISGKRIPNGFEDRALPHFKRHSKSPAAKGFVKNSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLATQYDLTVRNSVGDIVQF
MYGGDGLDPTDMEGKDKPLDYTRVFSHVQCSFPMKDEEPLSSKEILQVALPVLDGSDFEH
CGTEFTKDLRTFVEDIAKRVEKRHLQLSPSQMSASETSRSNVFSWVDRCTKSQLTHFLNL
CKEKYSRAKIEPSTAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINAS
RFISTPIISAPLMNDKNADEARGVKGRIEKTLLGEVSEFIEEVFLPNSCFILVKLAMDRI
KLLKLEVDVDSIRFAICNTRKLKLKPQQVTALSKSELCIFPSESSKSSLHYTMQQLKSDL
PNVLIKGHRNVNRAIIHVDEAQGDTYKLLVEGDDLLSVMSTVGVKGTAATSNNTAEVEKV
LGIEAARATIMNEINVTMKSHGMSIDTRHVMLLADLMTFKGEVLGITRFGLAKMKESVLM
LASFEKTSDHLFDAALHGQTDSIDGVSECIIMGIPMSIGTGMFKLLHKPEKTGPPSRRNL
IFDNPAFHLPESAMDVVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaatatgcacatattcattgtgtcagcaaaaacctgtacaatcaggatcaaagc
cgtacccctgtcccttttggggtgctagattcacacatgggcacaagcactaaagatcgg
agctgtgagacatgtggcaaaccattggctgattgtgtaggtcactatggttaccttgat
ctggaacttccaatctttcatgttggattctttaggtcaacaattgtcattttgcaaagc
atttgtaagacatgtgccagagtactgttaccacctcaagaaaagaaacaatttcttgat
caactaagcagatcaggtgtctcatctttaatgaggaagagcttaaagaaaaagattgtg
gaaaagtgcaaaaagatttctcattgtccatactgtgagacattaaatggtaactcactg
ttggatatctttatacaaatccttttaactaaactgtgtctgtttcccaagaaaggctcc
agaggatttgtgcaaagactaaaggggaaacaaggtcggtttcgtgggaatctgtctggc
aagagagtggactactccggacgcacggtcatctcacctgatcctaatcttcacattgat
caagtagcagttccagtacatgtggcaaaggttctcacttaccccgaacgagtaacagag
gccaacatacaactgatgaagcagctgatattgaatggagctgataaacatccaggagcc
aacttcattcagcaacggcaaacaaacatcagaaaatttctcaagtatggcaatagaaaa
cagatcattaaggaattgaagtatggagatatcgttgaaagacatctcatggatggagat
gtagtactgttcaacagacaaccctcacttcacaagcttagcatcatggctcatcaggcg
gtggtgagacctcaccgaacatttcgtttcaatgaatgtgtatgcaccccttacaatgca
gacttcgacggcgatgaaatgaatcttcatttgccacagacagaggaagctaaagctgaa
gcgctgacactcatgggggtcaaatcgaatttagtaacaccacggaatggcgaacctctc
atagccgccatacaggattttatcacaggggcttatctgctgacgcagaaagatgttttt
cttgatcggagccatatctcgcagctgttggcttacatcctggctgggaaagacgtgaat
atcagaatcgatcttccgcgtccagttatacttaagccagtgaaactttggactggaaaa
caggtgtttaatgtcatactgagaccgaacatggacatgccaatcaaaatgaaccttcgc
acaaaaggaaaacagtacacgagcggagaggatctttgttttaaagactcttatgtggtg
attcacaacagtgagttgatgtgtggtgcattggataaagctgtgctgggttctggctct
aagaacagtatcttctatgtgctcctcagagacttcggtggtcaggtaactgcaagaaaa
ataatgaaaatgtgctgatgtaatttttttataggtaacagagggttttctattggtatt
ggtgacgtcacgcctggccacggacttctgcaggcaaaggatgaacttctcgataacggt
tattccaagtgtgacagcttcattcaggattttaaagaaggcaagttgcaaacacagcca
gggtgtagcgcagacgatactcttgaggctgttattctgaaagagctttctgtcataaga
gatcacgctggaaaagcttgtctacacgagctgcacaagaccaacagtcctttaacaatg
gcagtatgtggttcgaaaggatcgttcatcaatatttcacagatgatcgcctgtgttggt
cagcaggccatctcaggcaagagaatcccaaatggatttgaggacagagctttacctcac
ttcaaacgacattccaagtctccggctgccaaaggatttgtcaaaaatagcttctactcc
ggccttactcccacagaattcttctttcacaccatggctggcagagaaggacttgtggat
actgccgttaaaactgctgaaactggatacatgcaaagacgacttgttaagtcgttggaa
gatctcgccacgcagtatgacttgacagtaagaaattcagtcggggacattgtgcagttc
atgtacggtggagatggactggatcccactgacatggagggaaaggataaaccgctggac
tatacgcgcgtgttcagtcacgttcagtgttcattccctatgaaagacgaagaacctctc
agttcaaaagagattctccaagtggctttaccagttttagacggctcggactttgaacac
tgtggcacggaattcacgaaggatttaagaacatttgttgaagacattgccaagagagtt
gagaaaagacatctacagctatctccctcccaaatgagtgcttctgaaacaagtcgatcc
aacgtgttttcatgggtagaccgctgcaccaagtcacagctgacgcacttcctgaacctt
tgcaaggaaaaatactcaagagctaagattgaaccgagcactgcagtgggagccctgtgt
gctcagagtattggggaacctggtacgcagatgactctgaaaacatttcacttcgctggg
gtagcttcaatgaacatcactcttggtgttcctcgtatcaaggagatcattaacgcgtcc
cgattcatcagcacaccaattatctctgctcctctgatgaatgacaaaaatgctgacgag
gcccgtggggttaagggtcgcatcgagaaaacactacttggggaggtttcagagttcatc
gaggaagtgtttctacccaacagctgttttattcttgtcaaactggccatggacaggatt
aaactactcaagctcgaagtagatgttgattccataaggtttgcaatttgcaatacaaga
aagctgaaattaaaacctcagcaagtgaccgctcttagcaaatcagagctgtgtattttt
cccagtgaaagcagcaagtcttcccttcattatacaatgcaacagctgaaatctgatctt
cccaacgtactcataaagggacatagaaatgttaaccgcgccatcatccatgttgacgaa
gctcagggagacacttacaagctgttagtggaaggagatgatttgctgtctgttatgtcc
acagttggtgttaaaggcacagccgccacttccaacaacacagctgaagtagaaaaagtt
cttggaatcgaagctgccagggcaacgataatgaacgaaatcaatgtgaccatgaagagt
catgggatgagtatcgacactcgtcacgtgatgttacttgcggacctcatgacttttaag
ggagaagtacttggtattacaaggtttggtctggcaaagatgaaggaaagtgtcctgatg
cttgcatcctttgaaaagacttcggatcatttgtttgacgcagctctgcacggtcagaca
gactccattgatggtgtcagcgagtgtattattatgggaattcctatgagtattggtaca
ggaatgttcaaactccttcacaagccagaaaaaacaggtccaccgagccggagaaactta
atttttgacaaccctgcatttcatttgccggaatctgccatggacgtggtgaggtag
DBGET
integrated database retrieval system
