Pocillopora damicornis (lace coral): 113667925
Help
Entry
113667925 CDS
T05773
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113667925
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113667925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
KH_N4BP1_2nd
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RuvA_C
Motif
Other DBs
NCBI-GeneID:
113667925
NCBI-ProteinID:
XP_027039592
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MADNDIIEEICVGHGKRSLVASLFQRIMLLFSVDVQFSSPEESAAKSGTQWLALKGEKDN
VDKAKEYVKSLCNPELELEVPFSERFYEILFKSLDELEKTTSAVVKFTSRNSCHLQGSAV
SVTMAQSAIEDKLRTPPTSHPPSVPAIEPQLREFARKLGYSNQVIDQAVQKLGPDVSQNT
LLNELLKTTASLPYQISASAQPKPTSAMGPYPVRREVVARGAPNTSAHVLRAGYENPRAA
VPSVQHSWERDLMAKGASAMPRPNHELYPEAIPRGTKRVLERPPDIIARGAGPSVPPLMQ
VQPYSNPGPSPYEIHREASSSASDRLDEQEQLMYQQILGAKKVSGNSSSNLRPVVIDGSN
VAMSHGRQDIFSCRGIQLCVEWFRARGHKEITVFVPLWRKEASRPDKPITDQDILYSLER
DGILVFTPSRKVNGRRIVCYDDRFIIKLAAETDGVVVSNDNFRDLTNENPKWRETIEQRL
LMYSFVGDKFMVPDDPLGKHGPNLEDFLRKGSATHPRICPYLKKCTYGLKCRFYHPERDQ
ETLNLKLERLVGIFGESVPEAAMRKAINDNPSANVTVLANILCDMGNGLSKH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacgatattatcgaagaaatttgtgttggccatggaaagcgttccctcgtt
gccagcttgtttcagcgaattatgctcctcttcagtgtggatgttcaattcagctcgccc
gaggaaagcgctgctaaaagtggaactcagtggctagctttaaaaggagagaaggacaat
gtggataaggcaaaggaatatgttaagtccctttgtaatcctgagctggagttagaagtt
ccgttcagcgagcgcttctacgaaattctgtttaaatcacttgatgaacttgaaaaaact
acaagtgctgtggtaaagtttacttcacgaaacagttgtcatcttcaaggcagtgcagtg
tcggttacgatggcgcagtcggcgattgaagacaagttgcgtacacctccaacttcgcat
ccgccaagcgtgcccgccatcgaacctcaattgagggaatttgcacgaaagctgggctat
tctaaccaagtcatagaccaggctgtccaaaagctaggacctgatgtaagtcagaacacg
cttttgaacgaacttctgaaaacaactgcttcgttgccttatcaaatttctgcttctgca
caacccaaacctacttcagcaatgggtccttaccctgttaggagagaagttgtggccagg
ggagcgccaaacacctctgctcatgtgttaagggctggctatgagaaccccagagctgca
gtacctagtgttcaacacagctgggaaagagatttgatggcaaaaggggcttctgcgatg
cctaggccaaaccatgaactttatcccgaagctattccgagaggaacaaaaagagttctc
gaacgtcctcctgatatcattgctagaggagcagggccttctgttccccctttaatgcag
gttcagccctacagtaaccctggaccatctccatatgagatccacagagaagcaagcagc
agtgctagtgacagacttgacgaacaagaacaactgatgtatcaacaaatacttggtgct
aagaaagtttcggggaattcgtcttcaaacttaagaccagtggttattgatgggagcaat
gttgctatgagtcatggaagacaagatatcttttcctgtagaggcattcaactgtgtgtt
gagtggtttagagcaaggggacacaaagaaatcacagtttttgtgccattatggcggaag
gaagcctcgcgtccggacaaacccattacagatcaggatattctgtacagtcttgagcgt
gatggtatcctagttttcactccatccaggaaagtgaatggcagaagaattgtttgttat
gatgaccgctttatcatcaaacttgcagcagagacagatggtgtggttgtctcaaatgat
aactttagagacttgacaaatgaaaatccaaaatggagagagacaatcgaacaaagatta
ctgatgtactcttttgttggggacaagtttatggttcccgatgacccactgggcaaacat
ggacccaatcttgaggactttcttcgaaaggggtctgctactcaccctcgaatttgccct
tatttgaagaagtgtacttatggtcttaaatgcagattttaccatcctgagagagaccag
gagacattgaatttaaaacttgagagattggttggcatatttggggaatctgtgccagaa
gctgctatgagaaaggctattaatgataacccaagtgccaatgtgacagtcttagctaat
attttgtgtgatatggggaatggactctccaaacactga
DBGET
integrated database retrieval system