Pocillopora damicornis (lace coral): 113668608
Help
Entry
113668608 CDS
T05773
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113668608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113668608
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113668608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Mating_N
DUF5638
IL34
Motif
Other DBs
NCBI-GeneID:
113668608
NCBI-ProteinID:
XP_027040348
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MAVQPCQQFSLDGTAEQGFLAFYRSLPEKPETTFRVFDRSDYYTVHGPDAAFAAKEVFKT
TSVIKYLGIGEKKVPSVILSKMNFESTVRDLLLVRQYRVEMYRASKGAKNTSAWELVAKA
SPGNLQQFEDILFGNNDMSVSAVVMAIKLGMENGQRVVGASYADVAARKLGVCEFVDNDQ
FSNLEALLVQLGPKECLLPQNDTSADAAKVLEVIQRSNILVSDRKKSEFSNKDIVQDLNR
LLKLGASGNSGTLAEIDLTHATSSLAALIKYLELLADESNFSQFHLSTFDLTQFMKLDAA
AVRALNLLPNPLDGGNKSMCLVGLLNKAKTAQGQRLIAQWIKQPLMDKNKIEERLDVLEV
FFEDTELRQTIQEELRKIPDFSRLAKKFQRQKASLQDCVRVYQALHRLPTFTGILTGYQG
NHHKLIRDCFTTPIKDLIEDFQKFIELVETTVDLDQVENHEYLIKASFDEGLQECREKMD
EILEQIPVELNKAARDLGLEAGKSIKLETNNQFGYFFRITKKEEKALRNNKRFTTIDTRK
DGIRFNNSALRQLNEQFQAFKETYNEVQSNLANEVIKVAGGYSEPMQMLSDIIAQLDALI
SFAHVSANAPIPFVRPKITPKGEGHIKLDMARHPCLEVQDDVAFISNDLKLERGNKEFLI
ITGPNMGGKSTYIRQTGVIALMAQLGCFVPCSSAEISITDCILARVGSGDSQLKGVSTFM
SEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISHYIATNIKCFCLFATHFHE
LTALADDVSTVTNLHVTAMTSSGTLTLLYKVKPGVCDQSFGIHVAELAHFPTSVIEFARK
KAAELEDFQGSTASLGDGVLDSDTGTSPAKRRRMVKQDGEEIIKDFLSQVAKLPVESMTE
EKTSQEVARLKEQVLARNNPYIQELLAK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaccttgtcaacagttttcacttgatggaacggcagaacagggctttctg
gccttctatcgctcattgcccgagaaacctgaaacaactttccgtgtgttcgatcgctcg
gactactatactgttcatggtcctgatgcagcatttgccgcaaaagaagtcttcaagaca
acaagtgttattaaatatcttgggattggtgaaaagaaagttccatcagtgattttgagt
aaaatgaattttgagagtacagttcgggatctgttgcttgtacgtcagtatagagtggag
atgtacagagcaagtaaaggtgcaaagaacacatcagcctgggaacttgttgccaaggca
tcacctggtaatttgcaacaatttgaagacatcctctttggaaataatgacatgtctgtg
tcagcagttgtcatggcaatcaagcttggtatggaaaatggccaaagggtggtaggtgct
tcatatgctgatgttgcagcaaggaagcttggagtctgtgaatttgtcgataatgatcag
ttttctaatctggaggctttgcttgtacagcttggtccaaaggaatgtctactgccacaa
aacgacacaagtgctgatgcagccaaagtattagaggtgattcaacgaagcaacattctc
gtatctgacaggaaaaaatctgagttttccaacaaagacatagtacaggatctcaacagg
cttttgaagttaggagcaagtggaaatagtggaactttggcagagatagacttgactcat
gcgacatcttcgttagcagctttgatcaagtacttggagctccttgcagatgagtcaaac
ttcagccagtttcatctgagcacatttgacttaacacagtttatgaagcttgatgctgca
gctgttagagctctcaatcttcttccaaacccattagatggaggcaataagagtatgtgt
cttgttggtttgttgaataaggcaaagacagcacagggacagaggttaatagcacagtgg
attaaacaacctttgatggacaaaaacaaaatagaagagagacttgatgttcttgaagtt
ttctttgaagacacagaacttagacaaaccattcaggaagagttgcgaaaaattcctgat
ttttctcgactagccaagaaattccagcgacagaaagcaagtttacaggactgtgtgagg
gtctaccaagctcttcatagacttcctactttcactggtattcttactggctatcaggga
aatcaccataagcttatacgcgactgctttacaacacccataaaggatcttattgaagac
tttcaaaagttcattgagttagtggagaccactgtagatcttgatcaggtggagaaccat
gaatatttgatcaaggcttcttttgatgaaggattgcaagagtgtagagaaaagatggat
gaaatcttagagcagataccagtagaactaaacaaggcagcacgagatcttggtcttgaa
gcaggaaaatcaataaaactggaaaccaataaccagtttggttatttcttcaggataaca
aaaaaagaagaaaaggccttaagaaacaacaaacgctttacaacaatagacacaagaaag
gatggaataaggttcaataattcagcattacggcaactgaatgagcagtttcaagctttt
aaggagacctacaatgaagtgcagagtaacctggccaatgaagtgataaaagtggccgga
ggttacagtgagccaatgcaaatgctaagcgacatcattgctcagcttgatgccttgata
agttttgcgcatgtctcagctaatgctcctattccatttgttcgtccaaaaattactccc
aaaggagagggacacatcaaacttgacatggcaagacatccctgtcttgaagttcaagat
gatgtggcttttatttccaatgatctcaagcttgaaagaggtaacaaagaatttttgata
ataactggccctaatatggggggtaaatctacttacatcagacagactggagtgattgca
ttaatggctcagcttggctgttttgtgccctgtagctcagcagaaatttccataacagac
tgtattttagcccgagtggggtctggagacagtcagctaaaaggagtttctacatttatg
tctgaaatgctggaaactgcctcgatattgaggtctgccactgaaaactctctcatcatt
atcgatgaactaggaaggggaacatcaacatatgatggctttggactggcgtgggcgata
tcacactacattgccaccaacatcaagtgcttctgtctttttgccacccatttccatgag
cttacagctcttgcggatgacgtttccacggtaaccaacctccacgttactgctatgacc
tccagtgggactctcacgcttttgtataaagttaaacccggtgtatgtgatcagagcttc
ggtattcatgtcgcggaacttgctcactttccaacaagcgtcatagagtttgccaggaaa
aaagcagcggaattagaagattttcaaggcagcactgcgtccttgggtgatggagtttta
gactctgatacaggcacatcgccagccaagagacggcgcatggtgaagcaggatggcgaa
gaaataatcaaagatttcctcagtcaagttgccaagttgccagttgagtctatgacagaa
gagaaaacctcacaagaggtagcgagattaaaggaacaagtattggccagaaacaatcct
tacattcaagaactccttgccaaataa
DBGET
integrated database retrieval system
