Pocillopora damicornis (lace coral): 113668745
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Entry
113668745 CDS
T05773
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113668745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113668745
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113668745
mRNA cycle factors
Common to processing body (P body) and stress granule
113668745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
113668745
NCBI-ProteinID:
XP_027040493
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MAPILGSVAQVLRQAETLKAALKSSVEDFAVGSEGWQSRQRLQDLYKSILLTDLESALDK
KVEQDLWNSAFKSQIDFLRHQTKERKGSKKLEVQAVLTLFLEAASGFYIQLLQELCLTYR
LDIPGHVRSSQLGILEEINGNSSPVKKPHTQSCYYICQDCLVHLGDIARYCDDPEQAEVF
YHHALVLVPSNGQPYNQLAILASGKGDELGTVYYYCRSIAVKNPFPAASTNLHKTLSKVV
ARHNTRDGIADISKAEFSHIFLQFHGLMYLAQDFDQARILKDRVVAALKGILKENKFTSE
FLTKLVAITLFLLWHIRTGGGDDLEEFDCIGKDEEECWQMTLEFTVELFDSLVLHVCDND
PSKEQSAAGCDVLPALNLLCQWMVGSSPNTWNGQLLKKTKVWEDFAALLNLLQVTHPHLP
EKIDLPLHEDWELQSFLPLRVSQRKLTYSMKRTRPEDESVHRVGRLVRFGNRLVNNASIL
SKVEDLTTGLSHFSLKINTSSPIEEEEKFPKSPQDIDLESAGQKLLASLPNLNKTTPAGT
PFAETSSLFKGPLDVVQTSAGIVPPSPSTVAQYSLFQSGWNVPLTSAALSQPDHPSPRPV
SKPTHHRVSPTDHLPSATGSSSVFPPTLPSPPVPENRRPTSFGTSFPPAAIQGNFNSPSQ
SPFGGFGYGGGWSSGVWAPNSSSASGSGGTSPGAHGLHSIWGSDFTPPSEGMSPLQQLLQ
EQKKHQQKDT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatccttgggtcggttgcccaagttttacggcaagcggaaacattgaaagcc
gctttgaaaagcagtgttgaagattttgctgttggcagcgaaggatggcagtctaggcag
agactacaagatttgtacaaaagtatcctgctaacagacttagagtctgcccttgacaag
aaggtggaacaagacttgtggaacagtgcttttaaaagccagattgactttttaagacat
caaacaaaggaaaggaagggctccaaaaaattggaggtccaggctgttttgaccttattt
cttgaagctgccagtggcttttatattcagcttttgcaggagttgtgcctgacatacagg
ctagatattcctggtcatgtcaggtcatcacagctgggtattcttgaagaaatcaatggc
aacagtagtccagtgaagaagcctcacactcagtcttgttattatatctgccaagactgt
ctggtccacttaggagatattgcacgttattgtgatgaccctgagcaggctgaagtgttt
tatcatcatgctcttgtattagtgccatcaaatggtcaaccatacaaccagctggccatt
ctagcaagtggtaaaggagatgaactgggtactgtgtattactactgtaggagcattgct
gttaagaatccattcccagctgcgtcaacaaatcttcacaaaacattgagcaaagtggtt
gccaggcacaatacaagagatggcattgcagacatatccaaggcagagtttagccatatt
ttcctacaatttcatggcctcatgtatcttgctcaagattttgatcaagcaagaattctg
aaagatcgtgttgttgctgcacttaaagggatcttgaaggagaacaaatttacctctgag
ttcctaaccaaattggtagcaatcactttatttcttttgtggcacatcaggacaggaggg
ggagatgatctggaggagtttgattgtattggcaaggatgaagaggagtgttggcaaatg
actctggagtttacagtggagctatttgatagccttgttcttcatgtctgtgacaatgac
ccatccaaggaacagtctgcggcagggtgtgatgttctaccagctttgaacctgttatgt
cagtggatggtgggctcatctcctaacacctggaatggacagctgctgaagaagactaag
gtgtgggaggactttgcagcgttgttaaacttattacaagtgacacaccctcatcttcca
gagaaaattgatcttcctcttcacgaagactgggaactgcagagcttcctgcctcttagg
gtcagtcagaggaaactaacttacagtatgaagaggacaagacctgaagatgagtctgta
catagagttggtaggctggtcaggtttggaaatcgactggtgaataacgccagtatcttg
tccaaagtagaggatctcacaactggcttgtctcacttctcactgaagataaacacttca
tcgcccatcgaagaggaagaaaagtttccaaagtcaccccaagacattgatttggagtct
gctgggcaaaagcttttggcttctttgcccaacctgaacaaaacgaccccagcaggaaca
ccatttgctgaaacgagctccttgttcaagggaccgttggatgttgttcagacttcagcg
ggaattgtcccaccctccccctccacagtagcgcaatactcactattccagtcgggatgg
aacgtacccctgacttctgcggctctgtctcaaccagatcacccttccccaagacctgtt
tccaagccgacacatcaccgtgtatccccgactgaccacttgccttcggccaccggaagc
agttccgtatttccacccactctaccttctcccccggttcctgaaaaccgcagaccaacc
agttttggaaccagtttcccccccgccgctatacagggaaattttaactctccttcccag
tctccttttggtggatttggttacggtggtggatggagttctggggtctgggcgccaaat
tcatcgagtgccagtggcagtggtggaacaagtcctggagcacatggattgcattccatt
tggggttccgacttcactcctccctcggagggcatgtcccctctgcagcaactgctacag
gagcagaagaaacaccaacagaaggacacctga
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integrated database retrieval system
