Pocillopora damicornis (lace coral): 113668756
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Entry
113668756 CDS
T05773
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03030
DNA replication
pdam03410
Base excision repair
pdam03420
Nucleotide excision repair
pdam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113668756
03410 Base excision repair
113668756
03420 Nucleotide excision repair
113668756
03430 Mismatch repair
113668756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdam03032
]
113668756
03036 Chromosome and associated proteins [BR:
pdam03036
]
113668756
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113668756
DNA replication proteins [BR:
pdam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113668756
DNA Replication Termination Factors
ELG1-RFC complex
113668756
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113668756
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113668756
Check point factors
HRAD17(Rad24)-RFC complex
113668756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_14
Gp44_lid
AAA_24
DNAX_ATPase_lid
AAA_28
Mg_chelatase
AAA_30
RuvB_N
SLFN-g3_helicase
DUF815
IstB_IS21
ResIII
AAA_19
AAA_5
AAA_2
AAA_3
AAA_23
bpMoxR
RNA_helicase
ATPase_2
AAA_7
nSTAND3
RapA_C
TIP49_C
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
113668756
NCBI-ProteinID:
XP_027040506
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MDAFLRGQSSTASSSKLKQQTGEETAGSSNKRVVVPWVEKYRPRSVDEVAYQDEVVSVLK
KSLEGADLPNLLFYGPPGTGKTSTILAIARQLFGPELMRSRVLELNASDERGIQVVRDKV
KKFAQLAASGIRTDGTPCPPFKLVILDEADSMTPSAQAALRRTMEKETKTTRFCLICNYV
SRIIEPLTSRCSKFRFKPLSTDTLEKRLNMICEKENVKCDKKAIQELIKISEGDMRKAIT
YLQSAQRLKGEDVVEADDISEIAGVVPSKMADKLFEACGSDSFEKLDATVQEIIAEGHAA
AQVINQVHDRIIEMADLNDHQKSAIMEKIAIVDKCLCDGADEYLQILSLCSVMMQQFCHA
GQT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttcttacgaggacagagttctactgctagttcttcgaagcttaagcaacaa
acaggcgaagaaacagcaggatcttcaaacaaaagggttgttgttccttgggttgaaaaa
tatcgcccaagatctgtggatgaagttgcttatcaagatgaagttgtgtcagtgttgaaa
aaatctctagaaggagctgatctcccaaacttgttgttttatggccctcctggcacagga
aaaacatccacaatacttgctattgcaagacagctgtttggacctgagcttatgagatca
cgggtgcttgaattaaatgcatcagatgaacgtggaatacaggtagtgagagataaagtt
aagaagtttgctcaactggcagcctctggtattcgaactgatggtaccccatgcccaccc
ttcaagctggttattttggatgaagcagattccatgacaccaagtgctcaggcagccttg
agaagaaccatggagaaggagacaaaaaccacaagattttgtcttatttgtaactatgtg
agcagaattattgagcccctgacttcccgttgttccaaatttcgttttaagccattatct
acagatactttagagaagagactcaacatgatttgtgaaaaggaaaatgtgaaatgtgat
aaaaaggcgatacaagaattgataaagatatcagaaggtgacatgaggaaggctataaca
tacctacaaagtgctcaaagactgaagggtgaagacgtggtagaagctgatgatatcagt
gaaatagctggggttgttccaagtaaaatggcagacaaactttttgaggcttgtggatca
gactcatttgaaaaacttgacgctacagttcaggaaataatagctgagggtcatgcagct
gctcaggtcatcaaccaggttcatgacagaattattgaaatggctgacttaaacgaccat
caaaaatctgccattatggaaaaaatagctatcgtcgacaaatgtctttgtgatggagct
gatgaatatttgcaaattttaagcttgtgttccgtcatgatgcaacagttttgccatgcc
ggacaaacatga
DBGET
integrated database retrieval system
