Pocillopora damicornis (lace coral): 113668892
Help
Entry
113668892 CDS
T05773
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03030
DNA replication
pdam03420
Nucleotide excision repair
pdam03430
Mismatch repair
pdam03440
Homologous recombination
pdam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113668892
03420 Nucleotide excision repair
113668892
03430 Mismatch repair
113668892
03440 Homologous recombination
113668892
03460 Fanconi anemia pathway
113668892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113668892
03032 DNA replication proteins [BR:
pdam03032
]
113668892
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113668892
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113668892
DNA replication proteins [BR:
pdam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113668892
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113668892
MMR (mismatch excision repair)
113668892
DSBR (double strand breaks repair)
HR (homologous recombination)
113668892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
DUF936
Motif
Other DBs
NCBI-GeneID:
113668892
NCBI-ProteinID:
XP_027040667
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MLSEGAIQEIISKPVEEHPHQPILQILGIKQIQSKGSDGKGNDRYRLVLSDGIHVLTSAM
LATQLNEMVTSEQLEVKAVIQLNKYICNVIQETRKVLILMDVTVIKPGREVPGKIGDPKN
LNADPGIDRQNPPQKNGNGAPQSIPGGVKAVMTNGKLAGGTSRGAELASSTYGSHKPLAS
RGNNIRSVFPITSLTPYQNRWTIRVRVTSKPKVRTYNNSRGEGRVFNVDLVDESGEIRAT
GFNEAVDKFYDLLELDKVFYISKCSLRTANKKFTTIKNDYELFLNNDSLIEPCDDTCDLP
TMQYNFVDIGDLGNFNADALVDILGIVINADDVTQITTKTTNRQVSKRDITLLDRSEKSV
RATLWGEEAETFDEFVGKFPVLALKGAKVSDFGGRSLSILGSTNMRINPMDLQEAHSLRG
WYDNVGKDSNVESLSGLRSDGGGCGYKTFFQMDHENLGMGDKADYFTSKATVLYMKKDNC
LYKACPTAECNKKVIDEGDGNYRCEKCNKTYPNFKYRLMLLTNLADFTGNHWVTCFQETA
ELLLKITADELGQMRDSGDECSFDQIFQEANFKTYIFKIRAKMETYNDETRVKCTAAGVS
PLDIMQEGKRMIAEIQKLRML
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcgaaggggcaatccaggaaattataagcaaaccggtggaagagcatccgcat
cagccaattttgcaaattctgggaataaaacaaattcagtcaaaaggaagtgatggtaaa
ggcaatgaccggtacaggcttgtgctatctgatggtattcatgtccttacatctgctatg
ttggccactcaactaaatgagatggtgacttcggaacaattagaagtgaaagctgttatt
cagctgaacaagtacatctgtaatgttattcaagaaaccaggaaagttttgattctgatg
gatgtgactgttattaaacctggaagggaagttcctggaaagattggagatcccaaaaac
ttaaatgcagatcctggcattgatcgccaaaatcctccacaaaagaatggaaatggtgct
ccacagagtattccaggtggtgtgaaagctgtaatgacaaatggtaaactagcaggtgga
acatccaggggtgcagaactggcctcttctacatatggaagtcacaagccacttgcttca
agaggcaataacatcagatctgtttttccaataacatcattgacaccatatcagaacaga
tggacaattcgagtacgtgttacaagcaagccaaaggtccgcacttacaacaactccaga
ggagagggccgtgtctttaatgtcgaccttgtggatgagtcgggagagatcagagccact
ggattcaatgaagctgttgacaagttttatgacttgcttgaacttgacaaggtgttttat
atctccaaatgctctctgagaactgcaaacaagaaattcacaaccatcaagaatgactat
gaactctttctgaacaatgatagtttgatagagccatgtgatgatacttgtgacctacca
accatgcagtacaattttgttgacattggtgacttgggaaattttaatgcagatgcactt
gttgatattttaggtatcgtgatcaatgctgatgatgtcacacaaataacaactaaaaca
actaacagacaggtttctaagagggacattactctattggacagatcagagaagagtgtg
agagcaactctttggggagaagaggctgagacatttgatgagtttgttggaaagtttcct
gttcttgccctaaaaggggcaaaagtctcagattttggaggacgctccttgtcaatcttg
ggttcaacaaatatgaggataaaccctatggacctacaagaggctcatagcttgcgtgga
tggtatgataatgttggtaaagattcaaatgtagagtctctctctgggctcagatctgat
ggaggaggttgtggttacaaaaccttctttcagatggatcatgaaaaccttggtatgggg
gacaaggctgactatttcacatcaaaggccactgttttgtacatgaagaaagacaactgt
ttgtacaaggcatgccctactgcagaatgtaacaagaaggttattgatgagggagatggt
aattatcgctgtgagaagtgtaacaagacctaccctaacttcaagtatcgcttgatgtta
ttaacaaacttggctgatttcactggtaaccattgggttacctgtttccaggaaacagct
gagttgcttctgaaaataactgcagatgaactgggtcagatgcgagactcgggggatgag
tgttcctttgatcaaattttccaagaggcaaacttcaagacatacattttcaagattcga
gcaaagatggagacatacaatgatgaaacccgggtgaaatgtacagctgcaggagtgtct
ccattggatatcatgcaagaaggcaaacgaatgatagctgagatccagaagctaagaatg
ttgtga
DBGET
integrated database retrieval system
