Pocillopora damicornis (lace coral): 113669388
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Entry
113669388 CDS
T05773
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113669388
04091 Lectins [BR:
pdam04091
]
113669388
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113669388
Lectins [BR:
pdam04091
]
C-Type lectins
Others
113669388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
GPS
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113669388
NCBI-ProteinID:
XP_027041208
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MTSLLWRTSYSKNVAEIPLVPQSAHNLALCLENVVKAGAVSASSHESLNIQEQGKSLVNT
SMKVLGEVSAAVLALKVPDENMTSITTRELSMTLGRHTPERLAGLEIKGGNGRFIFPPNR
TELVPKNNGTRFVDIQMVSISFNPYTWHSTKERVNSDVLVLNLKNDNSEMLEVSSLDEEI
VIAVPLKPQTPSKEKSWYFIKKDEIRFHEINVTHKNTLLILEILPQDPTVNLLVYMRFGQ
RPTTQEYDLNATISHSGNCVWKPTAQGKKEGETECFLNPLTPIEALAKRPGKYYLGFLSV
VVKDTPVSSAVYDSKTYQNYTLKVALGSCVFWSDKHEMWITTGCRVLAATDGFINCSCNH
LTAFGGSLLIKPNPIDFDKVQEEFNRLPETGNIAVIVTLATIAFCYTIALIIVRKTDKRD
GRDLGLPTQLPAPPNCTYEYEIVITTGVWKNSGTTAQVSMEIYGSDGNSGILRLCQGELG
ADDMLFSRGNSDLFVLNVNNSLGAIQEVRIGHDNSGDSPSWFLEEIFIRDVQSDQSWKFI
VGQWFALERRDGRIERMFDSTATQLDFSSEVARLWRRGLAQSHLWISVAAKPIRSRFTRV
QRVSCCFSLLLASMLANAMFYKLDGKYEQPIQVGPLKFSWRQVVTGIKSALIVAPINILL
VFLFQKGAERSRSNDNHCFKAAVIHCIAWFGLFFSCCVSATFTVFYSLIWEKTVSEQWLF
SVFVSLAQDVTLTEPVKLFFTALILAAIFKIKAKRSEVLECENSNQGKSSSSKERFWKLK
LSDVEKMRRSQAKKENLSRYFAELGIYLVFVFLLMVVCYGNKNDHRYLMTKSIRDGLPNF
SNVADDKMYWSWLQDNFIPGVFSGRWYNGQEEKQTTYIGNKHSLLVGMPRIRQLRVKSTS
CTIAMFKECYKGYSNTDEDKTACFKPGWKPVDNSTSNDELPRLCPKAWRYQSAKETDTVA
KWGQLSFYHGEGFIADLGNDNQTGHRIITNLKKSCWLDKQTRVVVAEFSSFNPSVNILGV
ATYFYEVEASGFKVASTQIDVISRDSSDTASLQFYSICLFLFILLVILHFGREIFRIYSH
RSRYFQSVWHWVEMLQVVFSVLAVVIYLIRQRRVNTATGKLQENIDANISFQEAIIWQEA
DNAALGVLIFIVTVKLLRIIRLNSQVIVFSKVLKISARSLSSFSIVLLTFFIAFLHFGVL
MFGTGFERYSSVLKATYFQLELTLGRVKARPINELSETHNIYAKIFSFLILSTLTIVCMN
FFIGMINDALLEAKHTAGQSVLHELVNKDPCISSKERKAFFDVISHKLRQSKASRTLDEM
EKKSTSNVSLDFEKSSKMNFDIKVSEMWVLREIKAEKTPSNVERKSFFDKTSRMLKAIRS
INYNEQRKGKGRKNVRFQEDVVDSFLRKLDKKKNDLFQHLDRVITGFSEEEEDIYHLLSY
VEGSLGPR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacttctctggaggacttcctattctaaaaacgtagctgaaattcctctggta
cctcaatctgcacacaacttagctttgtgtcttgaaaacgtggtaaaagcaggagcagtg
agtgcgtcaagtcatgaaagtttaaatatccaggaacagggtaaatcattggtaaatact
tctatgaaggtccttggtgaagtttcggccgcagtgctggctctgaaggtgccggatgaa
aatatgacatcgatcacaacgagagaactgtccatgacattagggcgacacacccctgag
agacttgcagggttggagataaaaggaggaaatggtcggttcattttcccgccgaacaga
acagaactagttcccaaaaataacggaacacgtttcgttgatattcagatggtgtctatt
tcgttcaacccatacacttggcacagtacaaaagagcgagtcaactctgatgttctagtc
ctgaacttgaaaaacgacaacagcgaaatgttggaagtatcaagtctagacgaagaaatt
gtcattgccgtgccgttaaaaccacaaacaccttccaaggagaagtcatggtattttata
aagaaagatgagatacgtttccacgagataaatgtcacgcacaaaaataccctactgata
ctggaaattttaccgcaagatccaactgtaaatctccttgtttacatgcgctttggtcag
cggccaacgacccaagaatatgacctcaatgctactatctcccatagcggtaattgcgtg
tggaagccaactgcgcaaggcaaaaaagaaggagaaacggagtgctttttgaatccactt
acgccgatagaagctttagctaaacgtccgggaaagtactatcttggtttcctgagcgtc
gtagtcaaagacactccagtcagtagcgcagtttatgactccaaaacatatcagaactat
actcttaaggtggctttaggaagctgtgtgttctggtcggataagcatgagatgtggata
acaactggctgtcgggttttagctgcaacagatggttttataaactgcagttgtaaccat
ctgacagcatttggaggaagtctcttaattaaaccgaatcctatcgactttgacaaggtt
caagaggagtttaatagattaccagagactggaaatattgcagttattgtgacgttagct
acgatcgccttctgttatacgatcgcgctcattattgttaggaaaactgacaaacgcgac
ggaagagatcttggtcttccaacacaacttccagccccaccaaactgtacatacgagtac
gaaatagtgatcactacaggggtctggaagaactctggcacaactgctcaagtttccatg
gagatttacggttctgatggaaatagtggcattcttcggctttgccagggagagcttggt
gcagatgatatgttattctctcgaggtaattcagacctctttgtacttaatgttaacaac
tcacttggtgcaatacaagaagtgcggattggtcatgataactctggtgacagtccctcc
tggtttttagaggaaatttttatccgtgacgtacaatctgatcagtcgtggaaattcata
gtcggtcagtggttcgctcttgagcgcagagatgggcgtattgagcgaatgtttgactca
actgcaactcaattagatttcagcagcgaggttgcaagactatggcggagaggcctcgca
cagtcgcatctttggatttcagttgcagccaagccaataagaagccgctttacaagagta
cagcgggtttcttgctgcttttcattgctactggcatctatgttagctaacgcgatgttc
tataagctagatggcaaatatgaacagcctatccaagttggaccgttgaaattctcgtgg
agacaagttgttactggtattaaaagtgcgcttattgtggcacccataaacatactctta
gtgttcttgtttcaaaaaggagccgaaaggtccagaagtaacgataaccattgttttaaa
gctgctgtaatccattgtatcgcctggttcgggttatttttttcttgttgtgtttctgcc
acatttacagtcttctacagcttgatttgggaaaagactgttagcgagcagtggcttttc
tcagtgttcgtctcacttgcgcaggatgtgaccttaacggaaccagtaaaattgttcttt
acagctttgatcctcgcagccattttcaaaataaaggctaaaagatcagaggtactagaa
tgcgaaaattctaatcaaggtaaaagtagcagctcgaaagaaagattttggaagctgaaa
ttgtcagatgtggaaaagatgagaagaagccaagccaagaaagagaacctgtcacgttat
ttcgcagagttgggtatctacttggtcttcgttttcttgctgatggtagtgtgctatgga
aacaaaaatgaccatcggtacctgatgacaaaatcaatccgagatggcttgccaaacttt
agtaatgtggcagacgacaagatgtactggagctggttgcaagataattttattcctgga
gtgttttctggcagatggtacaacggtcaagaggagaaacaaacaacgtacattggaaat
aaacattctcttcttgttggaatgcctcgaataaggcaactcagagtgaaatcgacttcg
tgtaccattgcaatgtttaaagaatgctacaaagggtattctaacacagacgaagacaag
accgcctgctttaagccgggatggaagcctgttgataactccacgagtaacgacgaattg
ccacgactttgcccgaaggcatggcgatatcaaagtgcgaaggaaaccgacaccgtagca
aagtggggacagttgtcattttatcacggagaaggatttatagcagatcttgggaacgac
aaccaaacaggacatcgcataataacaaatttaaaaaaaagttgttggctagacaagcaa
acgagagttgtcgtcgcagagttttcctcgtttaatccctcagtgaatattttaggtgtt
gccacatacttctacgaagttgaggcgtcgggattcaaagtcgcctcgacacaaattgat
gtcatttctcgtgattcttcggatacagcttcacttcagttttactcgatctgccttttt
ctatttattttactcgttattctgcattttggaagagagattttcagaatttatagtcat
cgctctcgttatttccagtccgtgtggcattgggtggagatgctccaagttgttttttct
gtgttagccgttgtaatttaccttatacgacaacgtagagtaaatacagcgacgggaaag
ttgcaagaaaacattgacgcaaacatcagtttccaagaagctataatttggcaggaagca
gacaatgctgcacttggagtcctaatttttatcgtcactgtaaagctcttgagaatcatt
cggttgaatagtcaagttattgtattctccaaagtattgaagatatcagcgcgatccttg
tcatcgtttagcattgttctattgactttctttattgcatttctgcacttcggtgttttg
atgtttggcactggatttgagcgctattcttcggtgcttaaagcaacttatttccaactc
gagctaactctagggcgagtgaaagctagaccaatcaatgaactgtccgagactcacaac
atatacgccaaaatcttctccttcttaattctttcaacccttactatcgtctgcatgaat
tttttcatcggtatgataaacgatgcacttctggaagcaaagcacaccgctggccaaagt
gtactgcacgaacttgttaataaagatccttgcataagctcaaaggaaagaaaagcattt
ttcgatgtgatcagtcacaagctgcgacagtcgaaggcctcacgaacgctagacgagatg
gagaaaaaaagcacttcaaatgttagccttgatttcgagaaaagttcaaaaatgaacttt
gatatcaaggttagcgagatgtgggttttaagggaaataaaagcagagaaaacaccaagc
aacgtggagagaaaatcattctttgataagacaagcagaatgttaaaagcgataagaagt
atcaactataacgaacaaagaaagggcaaaggtagaaagaacgtaagatttcaggaggat
gtcgttgactcttttcttcggaaattggataaaaagaagaacgacttgtttcaacatcta
gatagagttattacagggttttcagaggaggaagaggacatttatcatttgctgagctac
gttgaaggctcactcggaccacgatga
DBGET
integrated database retrieval system
