Pocillopora damicornis (lace coral): 113669765
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Entry
113669765 CDS
T05773
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113669765
04091 Lectins [BR:
pdam04091
]
113669765
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113669765
Lectins [BR:
pdam04091
]
C-Type lectins
Others
113669765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
113669765
NCBI-ProteinID:
XP_027041643
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MSILVGMPWLRQLRIRKNSCRSLAKMIADCYYDYSPENEDTTLLSLPGWIPLSLNTSWPN
ALQVCPKPWRYQSAAELRNDPIIAPYNCYEGGGYAAVMGYDESTAQGVLDDTITNGWIDR
QTRAIVFNAFVVTGMQFFGGAVLEYSSYLNAVMSQFKFLLGEAVPVDALRRDKPFIGPTF
AFLFCTSSTIFLMNMLVSVLNESYSDAKTNAEENAKELEMARFIEERLMDIFHEGSNRTE
FKLFCDETIFANMCLSEAEPFCLNSECIIQGTEERMLKVENRLIALTRRTEYIEADYLKE
ENDLIDLLLLMIIPLISNTLISKFTAITPENLEMSRLVMSVVNLAMGLEAKQKCESCSDG
GGNSNNNNMELTMQLTDSTAHMMISTLDDPEEPFTPELEQTATSVTGCLTNVLKSAAGSS
QDNTDSAVTLSSPEFVKKASEKLSSMSDAFFGRLVPSEDLVLKTPNLAISLKKVTANDAK
GLSMGEGPTKFKLPSSLGNIGGGEINAKMQAADFNPFTWDNSSNKIRSSVTSLELKSNSA
EKINVSNLVDDIEILIPISSPPQNSTNGTQHNFLKPNRISVRSYYAELANVPVSLKLGTA
KAGIQISLFIKFGKRPTINDFDHNFTMAFISTCDNQTDANATCFIRDGSVTVMPSKPGFL
YAGLLSRNPKNESQRSRQRRSCFGNRRERRSCVGVKDPPPKGSLSTVIPKYDPNTDVNYT
LTITQSSCLYWSENIEKWTTEGCRVSQDSNTTHLKCLCNHLTSFGGNFIQAPNPIDFDKV
FTEFSNLAESGNISVLVTIACFFLLYFVVLIFARRADKRDVDKVCPPKLIPLVKEGAYYY
DMVISTGVWKHSATTANITISIKGENYEQSQIPLREKGEWSELFERGSINGFVLVMKEPI
GPLKEIILEHDNSGDNPSWFVESVVIQDRQTEERWVFPINRWLALEKDDGQIEVTVDSKS
YSAFSDQVRSCFARKAADSHLWFSVFGKACSSTFTRVQRASCCLSVLFSAMIANAMFYNI
GGQSDGTIQVGPFKFSWRQIVIGVQSGIIIAPINLMIAFLFKSSSPRKKGSDKYKVTDEA
QRLLDEITDTGCMLPHFFVYLGWFLCFCTTIAAATFTLFYSLMWGKETSEQWLASILISN
GQDIFVVQPTKVMIAVMVISFLLTRKNRGKCEEEEETAIDSHAIEIDFSGDDPKQCFKKY
QREKMRERSKKEAQLTRMTRDIILHLIFVFLLAIVSYGNKNGNRFLMTTEMRNRFTKFNL
VKDAHSLEAWLKNEFISNIYNQAWYNRLEEKNDVYVGNKMSILVGMPWLRQLRIKKDSCR
SLSKMIADCYYDYSPENEDTTFLSLPGWIPLSLNTSWPDALQICPRPWRYQSAAELRNDP
ILASYNSYEGGGYAAVLGYDESTAHGVLDETITNGWLDRQTRAVILEFAVFNINTNLISV
ATYFYEAIATGAAYTTRRIETLELYSTESGALMFFLIGQFLFMAMVLFYFVVMLIHLYQQ
RLGFFRSVWNMVDFFMIIFSVASVAFYTIRAKSVLNTIKSIQANPYGIVHFHTALIWLNL
ENASIAVAVFLVTVKLLNLIRFNPHVIYLFSSFRQSIGYQLSYVLFFLIVFNAFVVTGMQ
FFGGVVLEYSSYLDAVMSQFEFLLGKAVPIDALRRDKPFIGPTFAFLFCMSTTIFLMNML
VSVLNESYGDAKSNAEENAKELEMARFIEERLMDIFHEGSNRTEFKLFCDETIFVNMCLS
EAEPFCLNSESIIQCTEERMLKVEKRLTVLTRRTECMEADYLKEENDLTYLLLVMINPSA
CDWEKKSKDHL
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatattggtgggaatgccgtggttgcgacagctcagaattagaaaaaattcctgc
agatcactcgcgaaaatgatagcggattgttattacgactattctccggaaaatgaggac
acgactttgctgagccttccaggttggatacctctatccctcaatacctcgtggcccaat
gctctccaagtttgccctaagccttggcggtatcaatcagcagcagaacttcggaacgat
cccattatagcgccgtacaactgttatgaagggggtggttatgcagcagtcatgggatac
gatgaaagcactgcacaaggcgtcctcgacgatactattactaatggatggattgatcgc
caaactcgagctatcgttttcaatgcatttgttgtaacaggtatgcagttttttggtggt
gcagtattagaatattccagttacctcaatgcagtcatgtctcaattcaaattcttgttg
ggagaagcagtcccagtggacgctcttcgaagggacaaacccttcattggtccgacgttt
gcatttttgttttgcacatcctcaactatatttcttatgaatatgcttgtttccgtcctt
aacgaatcatatagtgacgcaaaaacaaacgcagaggaaaatgcaaaagagcttgaaatg
gcacgttttattgaggagcgtttaatggacattttccacgagggaagtaatcggactgag
tttaagttgttttgcgatgagacaatattcgccaacatgtgcctttctgaagcagagcca
ttctgtttgaattctgaatgtattattcaaggtacagaggaacgaatgctaaaagttgaa
aatagacttattgctctaactcgacgaacagaatacattgaggctgattatttgaaagag
gaaaatgacttaattgacctcttgttactaatgataattcctctgatttccaacacattg
atatcaaagtttacagctataacaccagagaatcttgaaatgtctcgcttggttatgtca
gtagtaaacttggccatgggactggaagctaaacaaaaatgcgagagctgcagtgacggt
ggcggtaacagcaacaataacaatatggaattaacgatgcaattgactgatagtacagca
catatgatgatatctacccttgacgatccggaggagcctttcacaccggagttagaacaa
acagctacaagtgttacaggctgcctcacaaatgttctcaagtctgctgcaggctcgagt
caggataacacagactcggcagtaactctatcttctccggagttcgtgaaaaaggcctcc
gaaaagctgagcagcatgagtgatgcattttttggccgcttggttccatcagaagatctg
gtcttgaaaactccaaacttggcaatatcgctgaaaaaggtcacagctaatgatgcaaag
ggactcagcatgggagagggaccaactaaattcaagctcccgagcagccttggaaatata
ggtggtggagagataaatgcaaagatgcaagctgctgattttaaccctttcacttgggac
aatagcagcaacaaaatcagatcaagcgtcacgagtcttgagcttaaaagtaatagcgcg
gaaaagataaatgtttcaaatcttgtcgatgacattgagatattgattcccatttccagt
ccaccccagaactccactaacggaacgcagcataactttcttaagccaaatcgaatctca
gttcgaagttattacgcagaactagccaatgttcctgtatctcttaagttgggtacagcc
aaagcaggaatacaaatcagtctgtttataaaatttggaaaaagaccaacgataaatgac
tttgaccataattttacaatggcgtttatatctacatgtgacaaccaaacagatgctaat
gcaacctgctttatcagagatggctcggtaacagtgatgccctctaagccaggtttcctc
tacgcgggcttattgtctagaaaccctaaaaatgaaagtcaacgctctaggcaaagaagg
tcctgttttggaaatcgtcgtgaaagacggtcatgtgtgggcgttaaagatccaccacca
aaaggatcccttagcactgtgattccgaaatatgatccaaacacagacgttaactacact
ttgaccatcacccagtcgagttgtttgtattggtcagagaacatagagaagtggaccacg
gaaggttgccgggttagccaagactcgaacaccacccatcttaaatgtctctgtaatcat
ttaacatcttttggtggaaacttcatccaagcaccaaacccaattgacttcgacaaagtt
tttactgagttttcaaaccttgctgaaagtggcaatatttcagtacttgtaacaattgcc
tgttttttccttctgtacttcgtggtcttaatctttgcaaggagggccgacaagagagac
gtagacaaggtttgcccacccaaattgataccgcttgtgaaggaaggggcctattattac
gatatggttatcagcaccggcgtttggaaacattcagcaacaacagccaacataaccatc
agcatcaagggcgaaaattatgagcagagccaaattccattaagagaaaaaggggagtgg
agcgagcttttcgaacgtgggagtatcaacggctttgtgctcgtaatgaaagaacccatt
ggccctttaaaagaaattattttggaacacgataattcgggtgataatccgtcttggttt
gtagaaagcgtagttatccaagaccgtcagaccgaagaaaggtgggttttccctataaat
aggtggcttgcgttggaaaaagacgacggccaaatagaagttaccgtggacagcaaatct
tactctgccttctcggatcaggttcgttcgtgctttgccagaaaagctgccgacagtcac
ttgtggttctcagtgtttggaaaagcatgtagtagtacctttacacgtgtgcaaagagct
tcatgttgcctttcagttctgtttagtgcaatgatagcaaatgccatgttctataacatt
ggtggtcaatccgatggtactatacaggttgggccttttaagttttcttggagacagata
gtcatcggagtacaaagtggcattatcattgcaccgataaacttaatgattgccttcctg
tttaagtctagcagcccgaggaaaaaagggagtgacaaatacaaagttacagacgaggcc
caacgacttttggatgaaataacggacaccggttgtatgcttcctcatttctttgtttat
ttgggctggtttctctgcttctgtacgacaatagcagcagcaacgtttacgctgttttac
agtttaatgtggggaaaggaaacctctgaacagtggcttgcctctattctaatttccaat
ggacaagatattttcgttgtacagcccaccaaggttatgatagcagtcatggttatttcc
tttctcctgacaagaaagaacagaggcaaatgcgaagaagaagaagagactgctatcgat
tcacacgcgattgagatcgatttctcgggcgatgatcccaaacagtgctttaagaaatat
cagcgggaaaagatgagggagagatctaaaaaagaagctcagttaacaaggatgacaaga
gacattattctgcatttaatatttgtgtttcttctggctatcgtatcttatggaaacaag
aatggaaaccgttttctgatgacaactgagatgagaaatcgattcactaagtttaatctg
gtaaaggatgcgcacagtttagaggcatggttaaagaatgaattcatatcaaacatttat
aaccaggcgtggtacaaccgactcgaagagaaaaacgatgtgtacgtcgggaacaagatg
tcgatattagtgggaatgccctggttgcgacaactcagaattaaaaaagattcctgtaga
tcgctctcgaaaatgatagcagattgttattacgactattctccagaaaatgaggacacg
acttttctaagccttccaggttggatacctctctctctcaatacttcgtggcctgatgct
ctccaaatttgccccaggccctggcgatatcaatcagcagcagaacttcgcaacgaccct
attctagcgtcgtacaactcttatgaagggggtggttatgcagcagtcctgggatacgat
gaaagcactgcacacggcgtcctcgacgagactattactaacggatggcttgatcgccaa
actcgagctgtaattctagagtttgctgtttttaatatcaatacaaacttgattagcgtt
gccacatacttttacgaggccatagctactggtgcagcctacactacaaggagaattgaa
acactggagttgtacagcactgagtcaggagctctgatgtttttcttaattggccagttt
ctgttcatggcgatggttctcttttatttcgtagttatgttaattcacctttatcaacaa
cgcttaggtttcttcaggtctgtttggaacatggtggatttctttatgattattttctct
gtagcctctgtagcattttacacgatcagagctaaaagcgttttgaacactatcaaatcc
attcaagccaatccatatggaatcgtgcatttccacacagccttgatttggcttaacctg
gaaaatgcgtctattgctgtggctgttttcttggtgacagtcaagcttctgaatctgatt
cgttttaacccgcacgtaatatacttgttttcatcttttcggcaatctataggctatcaa
ctctcgtatgtgctcttttttctgatcgtgtttaatgcatttgttgtaacaggtatgcag
tttttcggtggtgtagtattagaatattccagttatctcgatgcagtcatgtctcaattc
gaattcctgttaggaaaagcagtcccaatagacgctcttcgaagggacaaacctttcatt
ggtccgacgtttgcatttttgttttgtatgtccacaactatatttcttatgaatatgctt
gtttctgtcctcaacgaatcatacggtgacgcaaaatcaaacgcagaagaaaatgcaaaa
gagcttgaaatggcacgctttattgaggagcgtttaatggacattttccacgagggaagt
aatcggactgagtttaagttgttttgtgatgagacaatattcgtcaacatgtgtctttct
gaagcagagccattttgtttgaattctgaaagtattattcaatgtacagaggaacgaatg
ttaaaagttgaaaaacgactaactgttctcactcgacgaacagagtgcatggaggctgat
tatttgaaagaggagaatgacttaacttaccttttgttagtaatgataaatccttcggcg
tgtgattgggaaaagaaatcaaaagatcatctctga
DBGET
integrated database retrieval system
