Pocillopora damicornis (lace coral): 113670232
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Entry
113670232 CDS
T05773
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113670232
Membrane trafficking [BR:
pdam04131
]
Protein recycling
Others
EARP complex
113670232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
113670232
NCBI-ProteinID:
XP_027042140
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MIMEDKGRGSAKETAKVKFTILRNQVYNLLRQGQSHKDTQNGDSTENLPEAVYKDGVQEF
QDDPRSDEEVLGAIKDIYFKDSSFDSSDYELHQLPKVLDLDDLDDYRNDLRRQLQAVSKT
LYKKVLENHNAYVQELQRVMDLEESLHTASSICDRGRRHLDRAKRGVSVGGLGILAKHRK
KQHLLILLDSLRTIKTLQRTDVRLKEMLEEEDYPGAIDLCLECEKAARAFKHYSCISELS
SNLQETLIDIEKQLDVALGKMCKNFTPVNYERLLTAYRYLGKTQIAMDKLIIHFMTAINH
ESFSVVMDHLGGSSSEVKCDDGFQHLHFEEQCKKVGAEHFTSCLLDLCKVLWSLMLSYHQ
IIKWHEQYDPAMHISETEQDEPSAEATYNKNYIQQKLEHGLNRIWKEVQERIKSHLLAHD
LSYFKYDDFIYVLDLVNRLIAVGEEFCGSTSEDLHDSIRTQTVKYFKTYHRSRMDELRMF
LENDAWELCPVKASFKIVDLSEFRFMKYQHPLVKTHKRTGSGTVQVTTDTGFFSRYSTHG
NPFDDVYVEDEGEDVLAENGEIVDGDVNENEKKSRGFSQDDDEEDDEDDDIPEELKLDYV
DERTGEIPSSRTDSSAHSRKHQKFLSKVPCTTNTTLNVLRVFGKYMQMMNVLKPIAFDVV
ICMSQLFDYYLFAVASFFAPEVMVDGSAHGLSIKLRTSLKRISDNLIQHLESAEMMSNGS
DMKVQHPYLSPLVDLSRVDTMFGLSERIIATESLVFLAGQFEFLHPHLESMIPANKRAFL
SQFYSQTVNTAQELRRPVYRSVGSRVIDYDQTLQLMTGVRWDIRDIMSQHNAYVDILVRE
LQVFSMRLSQLAKQIPVPQEAHSVLWDHCIRLVNRTFVEGVFSNEGRALMQLDYQQYLMK
LEKLTDIRPXXXXEFVETYVKAFYLTENEMERWIREHKEYSAKQLTSLVTCGVGSHVTKK
GKQKLLSIIEDMERSKAR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaagacaagggcagaggttctgccaaggaaactgcgaaggtgaaatttacg
attctgcggaatcaagtgtataacttacttcgtcaagggcaatcccataaggacactcag
aacggagactctaccgaaaacctgcctgaagctgtgtataaggatggcgttcaggaattt
caggatgaccctcgttccgatgaagaggtattaggggcaataaaggacatttatttcaaa
gattcctcattcgattccagtgattatgagcttcatcaacttccaaaagtcttggacctt
gatgacctggatgattatcgaaatgacctgcgaagacagcttcaggctgtctcaaaaaca
ctttacaagaaagttctggaaaaccacaatgcttatgtgcaggaattacaaagagtaatg
gacctggaagaatcactacatactgcttcttcaatctgtgacagaggacgaagacacttg
gatcgtgctaagagaggagtatcagttggtggattaggaatattggccaaacaccgaaag
aagcagcacctgcttatattactagactccttaagaacaataaagacattacaaaggaca
gatgtcagactcaaagaaatgcttgaggaagaggattatcctggtgccattgatctgtgt
cttgagtgcgagaaggcagccagagcattcaaacattacagctgtataagtgaattgagt
tcaaacttacaagagactcttatagacattgagaaacaacttgatgtagccttagggaag
atgtgcaaaaattttactcctgtgaattatgaacggctgctaactgcttacagatacctg
ggcaagacacagattgcaatggataaactgatcatccatttcatgacagccattaatcat
gagtcattttctgttgtaatggatcacctagggggatcttcttctgaagttaagtgtgat
gatggctttcaacatcttcattttgaagagcaatgcaagaaagttggagctgaacacttt
acgtcatgtttattagatctctgtaaggtgttatggtccctgatgttaagctatcatcaa
attatcaaatggcatgaacagtatgatcctgctatgcacatcagtgagactgaacaagat
gaaccatcagcagaggcaacttataacaaaaattacattcagcagaaactagaacatgga
cttaataggatatggaaggaagtccaggagagaatcaagtcacatcttcttgctcatgac
ctatcttattttaagtatgatgacttcatttatgtattggatcttgtcaacaggttgata
gctgttggtgaagagttttgtggcagcacatcagaggacctccatgattctattcgaaca
caaactgtgaagtattttaaaacttatcacaggtcaagaatggatgaacttcgaatgttt
cttgaaaatgatgcttgggagttgtgtcctgtgaaggcatctttcaaaattgtggacctt
tcagaattccgttttatgaaatatcagcatccacttgtcaaaactcacaaaagaacagga
tcagggacagtacaagttactacagacacaggtttcttctcaagatattccactcatggt
aacccttttgatgatgtgtatgttgaagatgaaggggaggatgtattagcagaaaatgga
gaaatagttgacggtgatgttaatgaaaacgaaaagaaatctagaggatttagtcaagat
gatgatgaagaagatgatgaagatgatgatattccagaggaactcaagttggattatgtg
gatgaaaggactggtgaaattccatctagcaggacagacagctctgctcatagcaggaaa
catcaaaaatttttgtctaaagttccatgtaccaccaacacaaccctcaatgtgttgaga
gtgtttggtaaatatatgcaaatgatgaacgtgttgaagcccatagcctttgatgttgtg
atttgcatgtcacagttgtttgattactacttgtttgctgttgcatcattttttgcccca
gaagtaatggtggatggaagtgcccatggtttgagtataaagctgagaacaagtttaaaa
cgaatatcagacaatcttattcaacatttggagtctgctgagatgatgagtaatggaagt
gatatgaaggttcaacacccttacttgtcaccacttgtggatctctctcgagtggatacc
atgtttggcttgtctgagagaataattgctacagaatccctagtgtttttagctggtcag
tttgaatttcttcatccccatcttgagtcaatgatacctgctaacaaacgagcatttctt
tcacagttttattcccagactgtgaatactgctcaggaactcaggcggccagtttacaga
agtgttggctcaagggtaattgattatgatcagacacttcagctgatgactggagtgcga
tgggacattcgggacatcatgtcacaacacaatgcctatgtggacattcttgtgcgggaa
ttacaagttttcagtatgagactgtctcaactggccaaacaaattcctgttcctcaggag
gctcactcagtattgtgggatcattgtattcgcctcgtgaacagaacctttgttgaaggg
gtttttagcaacgagggccgagcattgatgcaacttgactatcaacaatacctcatgaaa
ctggagaaacttacagatattcgaccaatnnnnnnnnnngagtttgtagaaacatatgtc
aaggcattttacctcactgagaatgaaatggaaagatggatccgagaacacaaggaatac
tctgctaagcagctgacaagtctggtgacatgtggtgtcggttcacatgtcaccaaaaaa
ggaaaacaaaaactgttgtccattattgaagatatggaacgctccaaagctcggtag
DBGET
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