Pocillopora damicornis (lace coral): 113670281
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Entry
113670281 CDS
T05773
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
pdam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113670281
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113670281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113670281
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113670281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
113670281
NCBI-ProteinID:
XP_027042202
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MGDQRGAGNSRSYKIRGYTRERHSAKPYARPYERKKGVLETVKDFFSPSWLVDLFKGNQR
SETIEIEDEDDEEEHDEVSQGIDQTFNPGFNERASSSQPGETLTAGKIGNGQLKSSFGPG
YFSSILREPELSVETPSTSRPARTFGLFTGDDRVGEPSISSGRTEECDNELEVPSSSNEK
VVRPSKTGEEEDITIIHPEAQEMSKSDSIKTSTPALFSTPGLKKRPNTTIFGEPLPEAST
SRGSNPSRPQLFPSLPESRPQPFSLSKNRPTFSLSAFGSPLPPKPSEAGGFSSPFYRGRT
SFGGASSLQSSGYKRQRMNSPTFGEAPKPVRKVITPKPVSTSGRSGVTSQTAKRILDALE
NMSSPLIDARRIPTPPDSASASPLSFSPAKRRRAPIPSRAVGSPRSLKAHFPGPPVQDLS
APQQVSISRLRAKETSTPASTATSSDSQFSTASTTIPTFSKPSVSSFTPTPLPISLSPSS
SKGGGKVKSSRSTSHYTQRDRGDEERSENQVVNPIPEVENPVPLKLPNGKSLPSFSFKSI
PQTATKPAATSTPIASNASTLDFAKNNFKFSSPEAKLPVFSKSSTAENQSSSNKITFSFS
EPVPVSKSNTNNESKLVKDKTEINRLSEVKQTVKPVEPNNNLLCKFTPLSGSWTCDTCLV
SNKATDMKCIACQSSKPSNGESAPRKPAPSSNDLMAKFAPKQGSWSCETRMVDNDASKTK
YVACETPKTGAKPPVLSSKPTIIIDNDLMEKFASPPDSWECDTCMVQNKSTDNTCSACQT
PNPGATKSATATATTAPLSGISSSIKPDSSLAAKFAPQAGSWTCDTCMVDNKSEDSSCVA
CQTPRPGAKPGANTGSGFNVGGGQTFSSSPFKFGMGNSTAASSSSVSAFKLGPSSSVDSK
TNGQSSPSVSITFGDNADQNRKNDTKSEGTTQLPTFVFGSSTILSSFSSETKTGAPTFTF
GAPVNNQSGKDDSSKPSFSFGGNSSVDKDKATSRGEYTFGTKKVTLDASNKGKSSSITEA
AASGILKVPEVKDPDVSVQSTKQAGAGLSIADAAKSGFLKVPAVGENKVDISAPPNVNLF
ASGPATNTPNASSRSSSAANSSSSGFSFTAQPGAPSPFSFGAVPPSSSAATPAADSSSTA
STSSKPLANPLAPGGSSLPTFQFGAASSSAPATKSEAAKTTALTQSPFSFPVNTAEPVKT
TASAPFAFVPNAAPPANTLAGSFSFGPNLTNTTGTPVAGGFQFATPSTQPSSALKPAAPS
VTTGLFQFGASNTTAMTSSATQPAAPSFGLTSTSVSSSSAPVKPFSFSSGSTASNFPFTP
TKPSVPIGGIQPSFTFGGSTPKPEVAFPGFGTSQPTSNQQTAPFMFGAASSNATPASEET
MEADGSSSSSNLFGSAASTGGTTFGTAGSNQGFAFGAPSGPSTGGFNFGAAQVAPGPNTF
AFGASGGGGGPTFGASAGPSLAAPIQGGFNFGAATANNNVGGTGAFNFGAPSGGPLFTAG
IAGDPNNIAQRKFKKAVRRSKR
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccagcgtggcgctggtaactctcgctcgtacaagatccgagggtatacgaga
gagagacattcagcgaaaccgtatgctcgtccctatgaacgtaagaagggagttctagag
acggtgaaagatttcttctctccatcatggcttgtagatttatttaaaggaaaccagaga
tcagaaactatcgaaatagaagatgaagacgatgaagaagaacacgacgaggtttcacag
ggaattgaccaaactttcaatccgggttttaacgagcgagcgtcgtcttctcaacccgga
gaaactttaacagccggtaagataggcaatgggcagttaaaatcctcgttcgggccggga
tatttctcatctattttacgagagcctgagctttctgtcgaaacaccttccacctcgaga
cctgccagaacgtttggtttattcactggggatgatcgtgtaggtgaaccttcgattagt
tcgggaagaacggaggaatgcgataacgaacttgaagttccaagttcaagtaacgaaaaa
gttgtaaggccgtcaaaaacgggcgaggaagaagatatcaccattattcatccagaagca
caggagatgagcaaatcagactcaattaaaacatccacgcctgccttgttttcaactcct
ggtctcaagaaaaggccaaacacaacaatatttggtgaacctttgccagaagcttcaaca
tcccggggatcaaatccttccaggccacagttgtttccttcattgcctgagtcccgtcca
cagcctttctcattatccaaaaacagaccaactttctctctgtctgcctttggttctcct
ttgccacccaagccatcagaagctggtggtttttcctctccattttatcgtggaagaaca
tcttttgggggagcttcctctctgcagtcttcaggttataaaagacagaggatgaattcc
ccaacttttggagaggctccaaaaccagtaaggaaagtgataacacccaagcctgtttca
acatctggaagaagtggtgtgactagtcagacagcaaagagaatacttgacgctttagaa
aatatgtcctcacccttaattgatgccagaagaataccaacacctcccgattccgcttca
gcttcacccctgtctttttcacctgcgaaaaggagaagagctccaattccttctcgagct
gtaggttctccacgttctctgaaggcccattttcctggtcctccagtgcaagatctctct
gcacctcaacaagtatcaatttctcgcttgagggcaaaagaaacctcaaccccagcaagc
acagcaacttcatcagattcacaattttccacagcatcaaccactatcccaacattttcc
aagccatcagtgtcctccttcactccaacacctttaccaatttcgctatcgccatcatcc
tccaagggtgggggcaaagtgaagagctcaaggagtacaagtcattacacgcaaagagat
agaggtgacgaggagaggagtgaaaaccaagttgtgaatccaataccagaggttgagaat
cctgtcccactgaagttacctaatggaaaatccctcccatccttttctttcaagtcgatt
cctcaaactgcaacaaaacctgcagctacgagcaccccaatagcctctaatgcatcaact
ctggactttgctaaaaataacttcaagttctcatcccctgaagcaaaattgccagtgttt
tccaaatcatcaacagcagaaaatcagagcagttctaacaaaattacattttcctttagt
gagcctgttcctgttagtaaaagtaatacaaacaatgaaagtaaacttgtcaaagacaaa
acggaaataaatagactttcagaggttaaacaaacagtgaagcctgttgaacccaataat
aatcttctttgtaaattcacacccttgtctggttcctggacatgcgatacttgtttagtg
tcaaataaagcaacagatatgaagtgcatagcttgtcaaagttctaagccatcaaatgga
gagtcagctcccaggaaaccagccccttccagcaatgacttgatggcaaagtttgcccca
aaacaagggtcttggtcctgtgaaacacgtatggttgacaatgacgcaagtaaaacaaaa
tatgttgcttgtgagacaccgaaaactggtgctaaaccacctgtgttatcatcaaaacct
actatcattattgacaatgacttgatggagaagtttgcttcaccacctgattcttgggaa
tgtgacacttgcatggttcaaaacaaatcaacagacaacacttgtagtgcctgccaaaca
ccaaatcctggtgctaccaagagtgcaacagcaacagctacaacagcacctttaagtggt
atttcatcaagtattaaaccagacagtagtttagcagcaaaatttgctcctcaagctggc
tcttggacgtgtgacacttgcatggttgataataaaagtgaagattcaagttgtgtggct
tgtcaaacaccgaggcctggggctaaaccaggagcaaatacaggaagtggattcaatgta
ggcggagggcagaccttttcttcctcaccctttaaatttggaatgggaaattcaacagct
gcaagttctagctcagtatcagcatttaaattagggcccagtagctctgtagattctaaa
acaaatggacaatctagcccttcagtttcaattacttttggagataatgcagatcaaaat
cgcaaaaatgacaccaagtcagaaggcaccactcaactacctacatttgtgttcggttct
tcgacaattctgtccagtttctcaagtgaaacaaagacaggtgctccaactttcactttt
ggcgctccagttaataatcaatcgggcaaagatgacagcagtaagccatcatttagtttt
ggagggaacagttctgttgacaaggacaaagccacctccagaggagagtatacatttggt
actaaaaaagttacccttgatgcctctaacaaaggtaaatcaagttctataacagaagca
gcagccagtggaattcttaaggtgccagaggtgaaagaccctgatgtttcagtacagtct
actaaacaggcaggagctggattgtctattgctgatgctgccaagtcaggctttctcaaa
gtacctgcagttggtgagaataaagttgatattagtgctcctccaaacgttaatctgttt
gcatcagggcctgctaccaacacaccaaatgcttcatcgaggtcgtcttctgcagcaaat
tccagcagctcgggattttcctttactgcacaacctggagcaccatcgccatttagtttt
ggggctgtaccaccgtcatcgtcagctgccacccctgctgcagactccagctctacagct
tccaccagtagcaagcccttggcaaatcccttagccccagggggatccagcttaccaaca
tttcagtttggagcagcttctagttctgcacctgccacgaaatctgaagcagctaagacc
acagctctaacccagtcaccctttagctttcctgtaaatactgcagaaccagttaaaaca
acggcctctgcgccgttcgcattcgtgccaaatgctgcacctccagcaaatactctggca
gggtctttcagttttggccccaatcttacgaacacgacagggacccctgtagcaggaggt
ttccagtttgcaacgccaagtactcaaccttcaagtgctctgaagcctgctgctccatca
gtaacaacaggattattccagtttggtgcttcaaatacaacagcaatgacaagttcagcg
acacaacctgcagcaccctcatttggattaacgtccacatcagtcagttccagttcagcc
ccagtgaagccattttcttttagcagtggatcgacagcgtcaaattttccgttcactcca
acaaaaccctctgtacctatcggaggtattcagccctcgttcacttttgggggatcaacc
ccaaagccggaggtagccttccctggatttgggacctcacaaccaacatcaaaccaacaa
acagcaccattcatgtttggtgctgcgtcatccaatgctacacctgcgtcagaagaaacc
atggaggccgatggaagcagcagctctagcaatctgtttggctcagcagccagtacagga
ggaacaacattcggtacagcgggctccaatcaaggatttgcctttggagcgccaagtggt
ccttccacaggagggtttaattttggggccgctcaggttgccccgggaccaaacaccttc
gcgtttggagccagtggaggaggtggtggtcccacatttggagccagtgctggcccatcg
cttgctgctcccattcaaggtggattcaactttggcgcagcaacggccaacaataatgta
ggaggcactggagcattcaattttggagctccatcaggaggcccgttgtttaccgccgga
attgcaggagatcccaataatatagctcaaagaaaattcaagaaagctgtcagacgaagc
aagcgctga
DBGET
integrated database retrieval system
