Pocillopora damicornis (lace coral): 113670434
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Entry
113670434 CDS
T05773
Name
(RefSeq) sex-determining region Y protein-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113670434
Transcription factors [BR:
pdam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113670434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Ccdc124
MlaC
Motif
Other DBs
NCBI-GeneID:
113670434
NCBI-ProteinID:
XP_027042375
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MSSLENHIKRPMNAFMIWSSRKRRELARENPKLHNSQISKILGSEWRKLTEEEKQKFFAQ
AKLLSELHMIEHPDYKYRPKRRPKKKYLKHNLSLNQASCSFGPCVCHESSAAPQENDQLG
KNPEHFDGNEDFKSGEVPVKKEETEYEDQSCLPASRPESTPSKEENFEDLPSHVQLRSSS
YLHKDNCKASRNISGQEKIHHRRFTDELSFREHRVPLSRGCHSMTFQSTPFQSQRHFLQS
HIPGEREVMQILPYLPPVRCGCCLPPEGLPTENEFSLGPHDTPYVIVDPRSQYFYEGRW
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccttgaaaatcacataaaacggccaatgaacgctttcatgatatggtccagt
cgcaaacgccgagaattagcgcgtgaaaatcctaaacttcataactcgcaaatcagcaag
attcttggctcggagtggagaaaactcaccgaggaggaaaaacaaaagtttttcgcacaa
gccaaactattgagcgagctccacatgatagaacatcctgattacaagtacagaccgaag
agacggcccaagaaaaagtacttgaaacacaacctgagcctcaaccaagcgtcctgttcg
ttcggaccgtgtgtttgccacgagtcctctgcggcgccgcaagagaacgatcagctgggg
aaaaatcctgaacatttcgatggaaatgaagattttaaaagtggtgaagtccctgttaag
aaggaagaaactgaatacgaagaccaaagttgtcttcccgcttcgcgaccagaaagcact
cctagcaaagaggaaaattttgaagacctcccttcgcatgtacagttgagatcctcgtca
tatttgcacaaggataactgtaaggcaagcagaaacataagtggtcaagagaagattcac
catcggagatttacggatgagttaagtttccgagaacatcgagtgccgttgtcgagaggt
tgccattccatgacgtttcaatcaacaccatttcaaagtcagcgccactttttgcaaagt
cacatccctggcgagagggaagtgatgcaaatacttccttacctccctcctgttagatgt
ggctgctgccttcctccagaagggcttccaaccgaaaatgaattttcactcgggccacac
gataccccatatgttattgttgacccaagaagtcaatacttttacgaaggaagatggtga
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