Pocillopora damicornis (lace coral): 113670555
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Entry
113670555 CDS
T05773
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113670555
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113670555
microRNA pathway
RISC loading complex
113670555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dsRBD
PAZ
Dicer_platform
DUF1798
Motif
Other DBs
NCBI-GeneID:
113670555
NCBI-ProteinID:
XP_027042512
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MLTTKRVPWIRSFKLYPNYGEITVSLQCHRSPLPRVKITKQELDIIREFHLFLFSHVLRY
PVEFTPGSVDGYFIVMLKASGRSIDFDYMREELSRASKQSNGNQRIVVDAVVTKNYVESP
QKYAVLNVRDDLTPMSSFPEKSQGNTYEEYFRLKYREKGCIANKNQPLVEVKEFSPRVNF
LVDRKLGTKNRRDVICLVPELCDQNPIRASLLSVSQILPSVLQRVTSLLLVADLKAMVAG
VRDTTDESSLPPIGAEEGSREAPMEVEDDALDPEEDDALFSDIRSMFHYSPPSADHPGSS
LVLQAITTTHSGDAFNLERLEMLGDSFLKLAVSIHLFCTYKDKDEGKLTQRKKNQISNLA
LYGAAAKKSLGEYLQSTQLARDMWCPTGCQFGDVLPNRTTGSPAMEVDSEDTVEAMEVDE
TLESGKKTKLTATEHARQKCNTQMIADKSIADSIEGLIGAYLIDCGYLGALRFMKFLGLK
VLPEVEAKDGNDLQAENNKSGCYARFWPDQTKITAAQGKGDMVFRLTSGLENFENESISY
NFQQKLHLVEALTHASYHENRVTPSYERLEFLGDALLDFLVTQHLYFRHVNLSPGELTDI
RQALVNNNIFATLAVEHSYHKYLKHMSPKWFQTVKSFVDRVEDEAEERKDNQLQTVTADP
FIIVSEEEEEGIEAPKVLGDIFESVAGAIFLDSGMDLSKTWDVYYRMMKPYIDEYSVNIP
RNPIRTVYEEDEDADFGKAKTLDDGKIQCTLKVDWGEYNGKGPNMKIAKATAAKLAIEGL
KKKYAAVYEEE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaacgaaaagagttccttggattcgatcgttcaaactctatcctaactatggc
gaaatcacagtatccttgcagtgtcacagatctcctttgccgcgtgtaaaaatcactaaa
caagagttggacattattcgcgagtttcatctctttctcttcagccacgttctacgctat
cccgtggaattcacaccaggaagcgtagatggttacttcattgttatgttgaaggcttca
ggaaggagtattgactttgattacatgagagaggagctttcgcgcgcatccaaacaaagc
aatggaaatcagcgcatcgtcgtggacgcagtagtaacaaagaactacgttgaatctcca
caaaagtacgctgttttgaatgttcgtgacgatctgactccgatgtcttcgttcccggaa
aagtcgcagggcaacacttacgaagaatattttcgccttaaatacagagaaaagggatgc
attgcgaacaagaatcaacctctcgttgaagtgaaagagttctcccctagagtgaatttt
ctagtggaccgaaaactaggaacaaaaaacaggcgagatgtgatttgtcttgttccagag
ttgtgtgaccagaatcccattcgcgcttctcttctcagcgtgtctcaaattctaccatct
gttcttcagcgtgtcacctccctcctccttgttgccgatctcaaggccatggttgccggt
gtacgcgacacaacagatgaatcaagtctccctcctattggagcagaagagggctcgaga
gaggcgcccatggaggtagaagacgatgctttggaccctgaagaagacgatgcgcttttc
tccgacatcaggtcgatgttccattacagtccaccatctgcagaccaccccggctcctct
ctcgttcttcaagctattaccaccacccacagcggagatgcgtttaatctggagaggctt
gagatgctgggggactcatttctgaagctggccgtgtccattcatctcttctgcacatac
aaggataaagacgaaggcaagctgacccagcggaagaaaaaccagattagtaatttggcg
ttgtacggagcagcggccaagaaatctctgggcgagtatctccagagcacgcagttggct
cgcgacatgtggtgtcctacgggatgtcagtttggcgacgtactaccgaatcgcaccaca
ggtagcccagccatggaagttgacagcgaggacacggtcgaggcaatggaagttgacgag
accttagagagcggaaagaagacaaaacttactgctacagagcatgcgcgccagaaatgc
aacacgcaaatgatagcggacaagtccatagctgacagcatcgaaggactgatcggagcg
tatctaatagactgtggttatcttggtgcattgcgatttatgaagtttctggggctaaaa
gttttacctgaagttgaagcaaaggacggcaatgatttgcaggcggagaataacaaatcg
ggttgttatgccagattttggccggatcagacaaaaataacagcagcgcaaggtaaagga
gatatggttttccgcctcacttctggcctggaaaactttgaaaacgaatcaatctcgtac
aatttccaacaaaagttgcatttggtagaggcgctaactcacgcgtcctaccacgaaaac
cgtgtcacgccaagttacgaaagactcgagtttctcggtgatgctctgttggactttttg
gtcacgcaacatttgtacttccgtcacgtcaacttgtcaccaggggaactgaccgatata
cgacaggccttggtgaacaataacatctttgccacccttgccgtagaacacagttaccac
aagtatctgaagcatatgtctccaaagtggttccaaacggtgaagagctttgttgacaga
gtggaagacgaggcagaagagaggaaagataatcagcttcaaacggtcaccgctgaccca
tttattatcgtgtctgaagaggaagaagaaggaatcgaggcgcctaaagttcttggtgac
atcttcgagtcagtagcaggcgcgatatttttggacagcggtatggatttgtctaaaacc
tgggatgtgtactaccgcatgatgaaaccctacatcgatgaatactcggtgaacataccg
cgaaatcccatcagaactgtctacgaggaagacgaggacgctgactttgggaaagcgaag
acccttgatgatggtaagatccagtgcactctgaaagtggactggggagagtacaatgga
aagggaccgaacatgaagattgctaaagctacagctgccaagcttgctattgaaggactg
aaaaagaaatacgctgcggtgtacgaggaagagtaa
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