Pocillopora damicornis (lace coral): 113671158
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Entry
113671158 CDS
T05773
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113671158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113671158
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113671158
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113671158
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113671158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
113671158
NCBI-ProteinID:
XP_027043171
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MDVTFKNLEGNEEENFQEDEETSPVSHKTKSYGISIDSGLIPSVPVEEQAAVLRNLGVNV
FNQDEFEEGVLKQVDEAIAVKETEEIVKGWEKNLKAVDEDIRIVENDLLEIDQILKRVES
KSGAGYESWRRTQAVQKQKDNKLRQLKKLQATQKALHHKLGIGNEEELEQQVEFETSDGN
IQDMSENRKFPLVRENLLEQDALIKNGEMTPFGGTIPGNGNKVNKNNFGATDAENSKNYK
HGGNDKREDEIEDGDDDKDNYDEDLYDAEYVPDEGELKYSWFEDDERNWNEDDVQPTKSE
KQTGRKRSLNVAYVEEDSLKPKKKKKKKKTNQMTRRRYDNKPVDDGNEKLYRQRIREWRI
SELLKKRGNSSAVESGEEEYPDVVFDKGLKIPGKLWDKLYKYQQTGVKWLWELHCQQAGG
IIGDEMGLGKTVQMIVFLAGLKYSKISARKKQPGLGPVLIVCPVTVLHQWVQEFHKWWPE
FRVAVLHETGSYQGFKQELIKKMCKENGVLVTSFAGIRQHQDHLLAQRFDYVILDEGHKI
RNPDAEITLACKQVETAYKCACVLRDTINPYLLRRLKKDVNMSLDLPAKNEQVLFCRLSQ
EQRELYQQYLDSKEVQAILAGNYKVFPGLIMLRKICNHPDLTSTAGSLLKAKQDALKAEL
GERAEEEEPDPDDGYGDPKRSGKMIVVEALLKMWQEQGHRVLLFSQTRQMLNILEKFVEA
RGYRYFRLDGSTPVASRQPLITNFNEDRSIFLFILTTRVGGLGVNLVGADRIIIYDPDWN
PSTDTQARERAWRIGQKKDVTIYRLITSGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFK
SNDLYELFTLDNCDVKYGTETSAIFAGSNCEVKLGSRRRKKREAEQTKVVKRQVDNEETK
KSKKVEIEKDAQISGGAFSIDWRDIAETQSLSQDKESKKEGQEASKEVYVESVGEKSSAQ
DGLIDEGKEKKSGENDELVNEDLAAKAMLVDSYDVEKEESTSASSKQDEAHIQIQTSEQF
ESKRENTATIAENDNIPKEDNQGSLEKETGHVLKKGKKNLSSLSDNELTKKVKRKKKKKR
MKRKRQGGVIDGQHIDHLDHSEIYNSVNASQSSAEEMEEQKQQNTHQDEFILKHLFKKSG
VHSALKHDVIMEASNPDYALIETEANRVAEHAVKALKRSRQLCLSANRGVPTWTGVSGSS
GLSESAAKRPRFGQKKKVGSEEVAKVRIRL
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaactttcaagaatttagagggaaatgaagaagaaaactttcaggaggatgaa
gagacaagccccgtaagtcacaaaacaaagagctatggtatatccattgattctggcttg
attccatctgtacccgtcgaagagcaagcagcggtgttgagaaacctgggagtaaatgta
tttaaccaggatgaatttgaggaaggagttttaaagcaggtcgatgaagctattgctgtg
aaagaaacagaggagattgtgaaaggatgggagaaaaacctgaaagctgtggatgaagat
atcaggattgtggaaaatgatttgcttgagattgaccaaatattgaaaagggttgagagt
aagagtggagctggatatgaatcatggagaagaacccaagcagtgcagaaacaaaaggat
aacaagcttcgccagttgaagaaattacaagcaactcaaaaggcattacaccacaagtta
ggtattggaaatgaggaggaattagaacaacaggtcgagtttgagacctcagatggcaat
attcaggatatgagtgaaaacaggaaattcccacttgtcagagaaaacctcttggaacaa
gatgcattgattaagaatggagagatgacgccatttggagggaccattccaggcaatggc
aataaagtgaacaagaacaattttggtgcaactgatgctgaaaactctaagaattacaag
catggtgggaatgataaaagagaagatgaaattgaggatggtgatgatgacaaggacaac
tatgatgaagatctttatgatgctgaatacgttcctgatgaaggtgagctcaagtacagt
tggtttgaggatgatgagaggaactggaatgaggatgatgtccaaccaactaaatcagag
aagcagactggaagaaaaagatctttaaatgttgcatatgtagaagaagatagccttaag
ccaaagaagaagaagaagaagaagaaaacaaatcaaatgaccagaagaagatatgacaat
aaacctgttgatgatggaaatgaaaaattgtaccgccaaaggatcagggaatggagaatc
agtgaacttctcaaaaagagaggcaattcctcagctgttgaaagtggtgaggaagagtat
cctgatgtagtttttgacaaggggcttaagattccaggcaaattatgggacaagttgtac
aaataccaacagacaggtgtaaagtggctgtgggagcttcactgtcagcaggctggtggt
attattggtgatgaaatgggcctgggaaagactgttcagatgattgttttccttgctgga
ctgaagtacagtaaaatatcagccaggaagaagcagccagggctaggaccagtgttgatt
gtgtgtcctgtgacagttcttcatcagtgggtacaagagtttcataaatggtggccagag
ttcagagtggctgtacttcacgaaacaggaagttatcaaggattcaagcaagagctgatc
aaaaagatgtgtaaagagaacggtgtgttggtgacatcctttgcgggaattcgtcaacat
caggatcatctgcttgcccagaggtttgactatgttattctggacgagggtcacaagatt
agaaatccagatgcagagataactttggcatgtaaacaggttgaaacagcatacaagtgc
gcctgtgttctcagagacacaatcaacccatacctgctgagaagactgaagaaagacgtc
aacatgagcttggatctaccagcaaagaatgagcaggttcttttctgtcgattgagtcag
gagcagcgtgaactttaccagcagtatttagactccaaagaggtgcaggccattttagct
ggtaactataaggtttttcctggtctgattatgctgcggaagatttgcaaccatcctgac
ctgacatcaacagcaggctcccttcttaaagccaaacaggatgctctcaaagccgaacta
ggagagagggctgaggaggaagaacctgaccctgatgatgggtatggggaccccaaacgg
tctggaaagatgattgttgtggaagctttgttgaagatgtggcaagaacagggacataga
gtattgctgttttcacagacaagacagatgttaaatatccttgaaaagtttgtcgaagcc
agaggctatagatacttcagacttgatggttcgacaccagtggcgtcccgacagcctttg
atcacaaacttcaacgaggatcgttcaattttcttgtttattctcaccactcgtgttggc
gggctgggcgtgaatcttgtgggcgcagacaggattatcatttatgaccctgattggaac
cccagtactgacacgcaggcacgagaacgagcctggaggatcggacagaagaaggacgtc
accatctatcgcttaatcacaagcggaacgatagaggagaagatctaccatcggcaaatt
tttaaacagttcctcaccaatcgagttctgaaagatcccaagcaacgcagattcttcaag
tccaatgacctttacgagctcttcacattagacaactgtgacgtcaaatacggcacagaa
acaagcgccattttcgctgggtcaaactgtgaagtcaaattgggatcgcgtcgaaggaag
aaaagggaggctgaacaaacaaaggtggtgaagcgtcaagtcgacaacgaggaaacaaaa
aaatcgaaaaaggtagaaatagaaaaggatgcacaaattagtggaggtgctttctcgatc
gattggcgggacatagctgaaacacaaagcttgtcacaggataaggaatcgaagaaagaa
gggcaagaagcatcgaaggaagtttacgtggaaagtgtcggtgaaaaaagctccgctcaa
gatggtctcattgacgagggaaaggaaaagaaaagtggagaaaacgatgagctcgtgaat
gaagatttggcagcgaaagccatgttagtcgattcttacgatgtagagaaagaagaatct
acatcagcctcttctaaacaagatgaagcccacatccaaattcaaacgtcagaacaattt
gaatcaaagagagagaacacagcaacaattgcagaaaatgataatattcctaaggaagac
aaccagggaagccttgaaaaagagactggtcacgttttgaaaaaaggaaaaaagaacctt
tcgtctttgagcgataatgaactgacgaagaaagttaagcgaaaaaaaaagaaaaaaaga
atgaaaaggaaacgtcaaggaggagtaattgacggtcaacacatcgatcatctggatcac
agcgaaatctacaactcagtgaatgctagtcagtcaagtgcagaagaaatggaagaacag
aaacagcaaaacactcatcaggacgagtttattctgaagcatctctttaagaaatcaggt
gtacatagtgcgttgaagcatgacgtcatcatggaggccagcaacccggattacgcactg
attgaaacagaggcaaaccgtgtggcagagcatgctgtgaaagcgctgaaacgatcacgc
cagttatgtctaagtgcgaacagaggagttcctacatggacgggcgtgtcaggttcatct
ggtttgagtgaatcagccgcaaagaggccacggtttggacagaagaagaaagtcggttca
gaagaagttgcaaaagtgagaattagactttaa
DBGET
integrated database retrieval system
