Pocillopora damicornis (lace coral): 113671407
Help
Entry
113671407 CDS
T05773
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113671407
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113671407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
Ion_trans
DUF5798
Motif
Other DBs
NCBI-GeneID:
113671407
NCBI-ProteinID:
XP_027043391
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MIEDPEYIKLEGLITDDQDMSLRKSLLSGRTSRRISDNSTNENSLQQSIDETVERNPCKR
ISLHQACRDGLATVVERLIRVNPSVCNEYDKDGMAPLHHAARGNFVQIMKLLLKAGADID
IPATKNCMYVTPLICASKFDSFDACRVLIQNGAQITKKTCNGQSPLHYAARKGHTRVLEV
LLNEGEADVDHEDNDKATPLHTAAQAGQIEVIRKLVFYGADVARRDNDGYTPLHLAAREG
HVDSFKEILKKAKSGGLSTKTLLNSPDCYGNVCLHLAIKHGHREIVELCLGSGADISTAQ
DDFSTPIHLACSHGDLEITKLLVQQGAKIESEDGNGLTPLLRASLGGHVPIIEFLLAQGA
RLYPVADSCTPSPLMCAVKRSQHNAVRYFLERGFSLKYKDLNWRTCLHVAVACADIETVD
LILENGGHSLLESKDQYGKTAIHYAAATCNVDIINRLILVGADVRAKDNEEKIALHFAAE
AGALCAVRSLLSACPESVNDIDYGSRTPLHFAAAEGRDKVATHLLQNSAEVDYRDDERFT
PLFHATICGCPATMDTLLYHGADVNALEKNRKPPLVFAAFFKHNKNFRKLVRLGADMTIV
STTGYNCLDAAIRVGNKEVCMEIIQHEKWREVLSNTKCEGVSPMRRLIERFPDVAKLVLD
KCIEHSPLLDTDPNYTITYDFSFIFPNSDEEFDLNQERYSGLKTMLDSGREELLFHPLTR
ELVRMKWRRIGLTVFLMGAIFYLTFLSVFSLYLYCKSDISKKHCNDDWIYPQEIFLLIFC
TSNLLLEAFQLYNERWMYFDLTNFLEVSTYVTTIIAVTLPNESMIEKDYRWAVGIIALLM
AFFAMLLQLQLLFCSGIYVTMLFEVLKSVFKVIVMFSLLIAAYGLIFYLLLGDELSYTSP
YMSVLKVFDMMAGGVEFNHYFVENLELRMPDLARFICFTFILVMSISLMNLLIGLAVGDI
ESVQKNAELKRLRTQIESLSQFEKKLPSSMKDRLYSPKLVLWPNSGSMSFVRKLTWSLGL
VDYAPVRMMEKTKPFHEEDKMKELQEQLKTQQESLNTLRTELRSQRTILENISINMGARS
PASNRTNLMDDF
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagatccggagtacattaaattggaaggactgatcacggatgatcaagacatg
tctctgcgcaaatcccttctaagtggaagaacttcgcgaagaatatctgataattcaacg
aacgaaaattctcttcagcaaagcattgatgaaactgtggagcgaaacccatgcaagcgg
atcagcctacatcaggcatgcagagatggcctggctactgtagttgagaggctgatcaga
gtaaatccttcggtttgtaatgaatacgacaaagatggaatggcacctcttcatcatgcg
gccagaggaaacttcgtacaaattatgaaattgcttcttaaagctggagctgatattgac
atcccggccactaagaattgtatgtacgtgacaccgctaatatgcgctagcaagtttgac
tcgttcgatgcttgccgagttctcattcaaaatggcgcccaaataacgaagaaaacctgc
aacggtcagtcacctttgcattatgctgcacggaaaggacatacacgtgttcttgaggtt
ctgctaaatgaaggagaagctgatgtagaccacgaagataacgacaaagccactccactg
cacactgcagcacaggccggccagattgaagtcattaggaaactggtgttctacggagca
gacgtggctcgtagggacaatgacgggtacacaccgctacaccttgcggcacgtgaaggt
cacgtggattccttcaaggagatcctcaaaaaagccaaaagtggtggtttgtctacaaag
acactgttaaacagtcctgattgttacggaaacgtctgcttgcacctagcgataaaacat
ggacacagagagatcgtggagttatgtttggggtctggggctgacataagtacagcacag
gatgatttttccactccgatccacttagcttgtagtcatggagacctagaaattacaaag
ctgttggttcaacaaggtgctaagattgaaagtgaagacggtaacggcttaacacctttg
ttgagggcttcacttggagggcacgtcccaatcatcgaatttcttcttgcacaaggagct
aggctctatccagtcgcagatagctgcaccccgtctcccttaatgtgtgctgtgaaacga
agccaacacaatgctgtcagatatttcttggaacgcggtttttcgctgaaatataaagac
ctgaactggagaacctgcctccatgtagcagtggcatgtgctgatattgaaactgtagac
ttaatcttagagaatggaggtcatagccttttggagagcaaagatcagtatgggaagaca
gcaatacattatgctgccgccacctgtaatgtcgatataatcaaccgtctgatccttgtg
ggagctgatgtcagggcaaaagacaacgaagaaaaaatagctcttcattttgctgcagag
gctggagctctttgtgccgtgagatcgcttctaagcgcatgcccagagtctgtaaatgac
attgactatggatcccgcacgcctctccattttgcagcagccgagggaagagataaagta
gcaactcatttgttacaaaatagtgctgaagttgactacagggatgatgaacgttttaca
ccgttgtttcatgctaccatatgtggttgccctgcgacaatggatacgttgctgtatcat
ggggcagatgtcaatgctcttgagaagaatcgaaagcctccgttggtatttgcagcattt
ttcaaacacaacaaaaattttcgaaagctcgttcggttaggagcagatatgacgatagta
tcaacgacaggctacaactgcctggatgccgctatcagggttgggaacaaggaagtctgt
atggaaataattcaacacgaaaagtggcgggaagtcttaagcaacacaaaatgtgaggga
gtatcacccatgcggcgactcattgaacggtttccagacgtcgctaaacttgtgctagac
aaatgtatcgagcattcaccacttctggacacagatccaaattatacgatcacctacgac
ttcagttttatttttccaaactcggatgaggaatttgacctcaaccaagaacgatatagt
ggactaaagacaatgttggattctggccgtgaagaacttttgtttcatcctctcaccagg
gagctggtacgaatgaaatggcgacgtattggtctgactgtgtttctcatgggagcaatc
ttttatttaacgttcctgtccgtattttctctctacctttactgcaaaagcgacatttct
aagaaacactgcaatgatgattggatttatccacaagagatatttctgcttattttctgt
acgtcaaacctacttttggaagctttccaactctacaacgagcgctggatgtattttgat
ttgaccaatttcttggaagtttccacctacgtgacaacaatcatagccgtcactctacca
aatgaatccatgattgagaaagactaccgatgggctgtcgggatcatagcactgttaatg
gcattcttcgccatgcttctacagcttcaactacttttttgctcaggtatctacgtcaca
atgctctttgaggtcctcaaatccgtattcaaggtgatcgttatgttttccttgctcatt
gcggcttatggattgatattttacttgctcttgggagatgagttgtcgtatacttccccg
tatatgtcagttttgaaggtgttcgacatgatggctggtggagtcgaattcaaccattac
tttgtggagaacctggaacttcgcatgccagatctggcccgcttcatttgtttcacattt
atcctcgttatgtccatctcgctaatgaacctgttgattggtttggctgttggggacatt
gagtctgtacagaagaatgccgagctcaaacgtctgaggacacagatagagtcactgtct
caatttgaaaaaaagctgccatctagtatgaaagatcgcctatattctcccaagctggtt
ctttggccaaactcgggatccatgtcttttgtgaggaaattaacgtggtctctgggacta
gtagattacgctccagttcgaatgatggaaaaaactaagccattccatgaagaagacaag
atgaaagagcttcaagaacaactcaaaacgcaacaagaaagtctcaatacgctacggacg
gagctgcgatctcaaagaacgatcttagagaacatttccatcaatatgggagcgagatcc
cctgccagtaacagaacaaatctgatggatgatttctga
DBGET
integrated database retrieval system
