Pocillopora damicornis (lace coral): 113671786
Help
Entry
113671786 CDS
T05773
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113671786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113671786
03021 Transcription machinery [BR:
pdam03021
]
113671786
03036 Chromosome and associated proteins [BR:
pdam03036
]
113671786
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Helix-turn-helix
ARID
113671786
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113671786
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113671786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
MCR_D
Motif
Other DBs
NCBI-GeneID:
113671786
NCBI-ProteinID:
XP_027043840
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MAQTVRVHASNRGTSDSRLQHPNKVPTSNTEHANHHFKFPSTGGDFFPETRYRENGSASA
LVSQNQDILEELHDYIQGTEDPTDNNNKANSLPNKMATSNSSGTNQPTANANGFQMSMNS
SSGLPNKSGPLGLGMPASVHLNNQLSSILDPGSTSASPAVPSRNLSESNPNPANMKLLAS
NQPNLSPQTRYNEFNSRQEMLLRDYREVPIAPRAPNSTEQYGSQQRFMSAQSENQHKRGL
NSQSTSAYHPNYYSQESSAPQAGQRAPNSQPDERNMITNQHFQWPNRLQTTNHCSSNLPT
NTSPGPPMSRAQLQQQGLPQQQSPYMIMGGSQQQQQPQQQHQPQSQQAGPQQSYASYMMQ
QQQQGGMKAGALPQSQQYYGNMPLGRQVVSQASLSGQPQHMANQMQTPPQDYSSFQQQQM
QHRFPQPQFQQQMSYMAQQQQRQLQQQHQPSYPQPPTGIPRMPSSHPQPILPKPASGDMF
GSSAGMRYSSSNVGDNLPGPDFPSSRMTDQQQHGIPSASQSYGNTPMGRMGSSSEMLAKY
GSSQGAYQRNNPQSFPVSLHSRHTPSPNITLGSPMRVVADGTSPSVGMPNFGTDSPTSTG
SLPTYPRSKMPPPFGMAGTAMSGSGVSGNSLPPASVGGSTAGSAVGGTAAAAAAAAVLEA
ANSGPRYPGAAQGPGPPFVSPQEMMLSSKGSENMPASGMSPMQLGSMMGANVQTGRVPSP
TLNELPTAEDVEAMIESMRAEEAGLPTDNDNQQQPPSQGSAPPSVASLPTTVASSPSQPQ
GTPVNGPNSNTDSRELTGSTMDLTPAIEKGDSPPSAPSSPLSNFSGLSPGVSPSGVSITS
SFGNAEIDLDEINPSLPNNSISMSSYQFPSSRQNQQQYEKFSKLYELSDEPERKEFLNKY
QAFMNSQGTQIAQVPVVMRQPLDLFKFYTVVQERGGLQEVVKRKLWQEVLEAMNLPTDNP
NVVNHLRNQYSRYLLSYEMKFSKSNSIDDIKINLLEGSGIPPPNATVTCSEAIIPTSSLT
QTSRAPDSTPIHGTYSSMTNDSVPNLPPSYSGKDGYPEPSYDTNKMYPEFRENSGSFPMN
PPTPSSPFGMPQYPYGGERRSSLSNHPQSGGLPPYMMSQRNMYQGPSSLSQFYQQSNSQA
GHSGTNYQHAQYQQRSSPSLMGSLASPHSMVPNASSQDKVHSLWGSQYSPSAEPEHMVDY
PPGAHNRLTRSSSGPQSQYSPAPPYGSYPGRQNQYSATPPYRPSPSPSPSSRQPMAQAPP
LQALPKMKFPVQQTAHPPSQQQSHQQQSHTSSIKREMPFPNDCVEATRPVFTKKRKLTSR
DLGPVEAWRVMMSLKSGLLSEATWALDTLNILLYDDNTVLYFMLSQLPGLLDNLIDHFRR
YLIDIFDTFVESEISVGSVVLQIARKEENEEKIEKLNRAAKNSFTALLVASTFDIPNDGF
QSGSGDWLMGGGDTTRHIQTHLGFKTRPEYSTKVIHCREETECSEDVILSETDENCEGEV
KVENENTNQTESDDEKSLAECKDDNCCANEMKCDGNFSKLKTELPSPVVEEGKSKADIVV
KKEKEPSQEELKTQENDKFNRESEVEQFTARLKKELDLDLDSDEEDTESDAYIRSVVSKI
NVKQDAVVEEQSCGKEDAPLCLRTESQDAVSRRCLCVSNILRGLSFVPGNDAEMSRHAGL
LLIVGRLLLLHHKHSKRVPYRHSYLQDEIEVECPSDDRHDWWWYCLEGLRENALVITANV
AGQLDLSLYPEAISLPLLDGLLHWFICPSAAAQDPMPTATPGTSLSPRQLVLEALAKMSI
LESNVDIILSTPPLTRVDELYTMLVRLVGERDNPVTRELALVLLSNLAQGENSFVGFGDS
KACISMLLEFIEDAASSMSAYSSGSALAQAGFHSESFCGTSVDMLRRAASTLVCLARIRS
NRALFLPFQQRILRLSVLRVLDSTITNHLAEILFYLSR
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaactgtccgggtccatgcaagcaaccgtggaacaagcgatagtcgcctacaa
catcccaataaggtgcctacatcgaacacggaacacgctaatcatcattttaaatttccc
tcaacgggcggagatttcttccccgaaacgagataccgcgagaatggttctgctagtgca
ctagtctcgcaaaatcaagatattttggaagagttacacgattatattcagggtactgaa
gatccgactgacaacaataataaggcaaattccttgcccaacaaaatggcgacgtcgaac
tcaagtggaacgaaccaaccaacggcgaacgctaatggatttcaaatgtccatgaattca
tcttcgggactaccaaacaagagcggaccgctaggtttgggaatgcccgcctccgttcat
ctaaacaatcaactttcgtcaattctcgacccaggaagtacctcggcaagcccggccgtg
ccgtctagaaatctcagcgaatcgaaccctaatcccgcaaatatgaaacttctggcatca
aatcaaccaaatttatcaccacaaacccggtacaatgaattcaactcgagacaggaaatg
ctattgcgagactatcgcgaagttcccatcgcacctagagcgccgaactcaaccgaacaa
tatggctcccaacaaaggttcatgtctgcgcagagtgaaaatcaacataaaagagggtta
aattcccaatcaacaagcgcttatcatccaaattattactctcaggaatcgagcgcgcct
caagctgggcaaagagcgcccaactcgcaaccagatgagagaaacatgatcacaaatcag
cattttcagtggccgaacagactgcagacgacgaaccattgttcgtcaaatttaccaaca
aatacttcacccggcccgccgatgagtcgagcacaattgcagcagcaaggacttcctcag
caacagtctccttacatgatcatgggtggttcacaacaacaacaacaaccacaacaacaa
catcaaccacaatcccaacaagctggtcctcaacaatcatatgcatcatatatgatgcag
cagcagcagcaaggaggaatgaaggcaggagctttgccacagtcccagcaatactatggt
aacatgcccctgggcaggcaggttgtcagccaggcaagtctctcaggacagccacaacat
atggctaatcaaatgcagacacctccacaagactattcaagctttcagcaacagcaaatg
caacatagatttccccaacctcagtttcaacaacaaatgtcttacatggctcaacagcaa
caaagacaattgcagcaacagcatcaaccatcatatcctcaacctccaactggaatacca
aggatgccatcctcccatccacaaccaatcctccccaaaccagcctcaggggacatgttt
ggcagctctgctggcatgagatactccagcagtaatgtaggagacaatcttccaggtcca
gattttccctccagcagaatgactgatcaacaacagcatggaattccatcagcatcccaa
tcatatggcaacacaccaatgggtcgtatgggctcctcttcagagatgttggctaaatat
ggaagtagtcaaggggcataccagcgcaataatcctcaatcttttccagtgtctcttcat
tcccgacacacaccttctcccaacattactttgggttcacccatgagagttgttgcagat
ggaacttctccatcagttggtatgcccaattttggcacagacagcccaacatctacagga
agtttgcccacttatcctcgcagtaaaatgccccctccttttggaatggcaggaactgca
atgtctggctctggagtatctggtaacagcctacctccagcgagtgtgggaggctctaca
gctggatcagctgtgggtggaacggctgctgcagctgctgcagcagctgttcttgaagct
gctaactctggaccaagataccctggagcagcacaaggtcctggtcctccctttgttagt
cctcaggagatgatgttgagtagtaaaggatcagagaacatgcctgcttcagggatgtcc
ccaatgcaattgggttctatgatgggtgcaaatgttcaaacaggccgggtaccatctcca
acacttaatgaacttccaacagcagaggatgtggaagccatgattgaatcaatgagagca
gaagaagctggacttccaactgataatgacaaccaacagcagccaccctctcaaggttct
gctcctccatctgtggcatcgctgcctacaacagtagcatcctctccatcacagccacaa
ggaacccctgtcaatggcccaaatagtaacacagattctcgtgaacttactggttctact
atggatttgacccctgctatagaaaaaggggattcccctccctctgccccatcgtcacct
ctatcaaatttttctggcctttcccctggagtgtctccttcaggagtttccattacatca
tcatttggtaacgctgagatcgacttggatgaaatcaacccttcacttccaaacaattcc
atctcaatgtcctcataccagtttccatcatccagacagaaccaacagcaatatgagaag
ttctccaagttgtatgaactctctgatgaaccggagaggaaagagtttctcaataagtat
caggctttcatgaacagtcaaggtacacagatcgcccaagttccggtagtaatgaggcag
ccgctggatctttttaagttctacactgttgtccaggaaagaggtggtttacaagaagtg
gtcaaaagaaaactctggcaggaagttttagaggccatgaaccttccaacagataacccg
aatgtagtgaaccaccttcgtaatcagtactccagatatctgttgtcgtacgagatgaaa
ttcagtaaaagtaactccattgacgacattaagattaatcttctggaaggttcgggtatt
ccgccccctaatgcaacagtcacttgctcagaggcaatcataccaaccagcagtttgacg
cagacctcgagagcacctgactccacgcctattcacggaacctacagctcgatgactaat
gactctgttcccaatttacctccaagctacagcgggaaggacggataccctgagcccagc
tacgacaccaacaaaatgtacccagaatttagagaaaattctggaagttttccaatgaac
cctcccacgccttccagtccgtttggaatgccccaatacccttacggtggagagagaagg
agcagtttatcaaatcaccctcaaagtggagggctccctccttacatgatgtctcagcgt
aacatgtatcagggcccttcgtccctgtcacaattctatcagcagtcgaactcacaagca
ggccattcagggacgaactaccagcatgcgcagtaccagcagcgttcaagcccgtcattg
atgggatctctggcatcaccccattccatggtgcccaatgcaagctctcaagataaggtg
cactcgttatggggttctcaatacagcccatcagcagagccagagcacatggtagattac
ccacctggggcacacaacagacttacgcgttcctccagcggacctcaatctcagtactcc
cctgcaccgccatatggctcttacccaggccgccaaaaccagtattcagcaacaccacca
tatcgccccagtccttcgccgtctccttcgtcaagacagcccatggcacaggcaccgcca
ctccaggctttgccaaaaatgaagtttcctgtacagcaaactgcacatccaccatcacaa
cagcagtcacaccaacaacaatctcacacgtcatctataaagagagagatgccttttcca
aacgactgtgttgaggccacaaggcctgtgttcactaagaagcgcaaactcacttccaga
gatttgggccctgttgaagcatggagggtaatgatgtcattgaaatccggcttgttatca
gaggcgacctgggcattagatacccttaacatcctgctctatgacgacaacacggtgcta
tacttcatgttatcgcaactgccgggtctcctggataaccttatcgatcatttccgacgt
tatttgattgacattttcgacacatttgtcgagagtgagatcagcgttggttcggtggtt
ttacaaattgcgcgaaaggaggaaaacgaggaaaagattgaaaagttaaatagagccgca
aaaaatagttttaccgctctgttggtagcatccacgtttgatattccaaacgatggattt
caaagcggatccggcgactggctcatgggaggtggagacaccacgcgtcatattcaaaca
caccttggcttcaagacgagaccagaatactcgacaaaggtaattcattgcagagaagaa
actgagtgcagtgaagatgtaattctttccgaaactgatgagaattgcgaaggagaggta
aaagttgagaacgagaatacaaatcaaactgaaagtgacgacgagaaatcattagccgag
tgtaaagatgacaattgttgtgcaaacgaaatgaaatgtgatgggaattttagtaaactg
aaaaccgaactgccctctcctgtggtagaggagggcaaatcaaaagctgacattgttgtt
aaaaaagagaaagaaccatcacaggaggaattaaaaactcaggaaaatgataagttcaac
agagagagtgaagtagaacagtttaccgcgcggttaaaaaaggaactggacttagacctg
gattctgatgaagaggatacggaatcggacgcttatattcgatcagttgttagtaaaata
aacgtgaaacaggatgcagttgttgaagagcagtcgtgcggcaaggaagatgcacctttg
tgcctaagaactgagagccaggacgccgtgtcccggcgctgcctttgtgtgtctaacatt
ctacgtggactttcctttgttccgggaaacgacgctgagatgtcgcgtcacgcaggattg
ttactcatcgttgggcggcttttacttcttcatcataaacactccaaacgtgttccctac
aggcattcctatctgcaggatgagatcgaggtggagtgtcccagcgacgatcgtcacgac
tggtggtggtactgcttggaaggtctgcgtgagaacgctttggtgataacagccaatgta
gccggtcagttggacttgtctctgtatcctgaggccattagtcttcctctgttggacggg
cttctccactggttcatctgtccgtcggctgccgctcaggatcccatgcccacagctact
ccaggtacttccctgtccccgaggcagctggttcttgaggccttggcgaagatgagcatc
ttggagtctaatgttgacatcattctttccactccgccgttgacgcgggtggacgaattg
tacaccatgttggttcgacttgttggcgagagagacaatccggtgactcgtgaacttgct
cttgtcttgctgtccaacctggcacaaggagagaattccttcgttggtttcggcgacagc
aaggcgtgtatttcaatgttgttggaatttatcgaggatgcagcgtccagcatgagcgca
tattcatcaggtagtgccctggcgcaggccggctttcattcggagagcttttgcggtacg
agtgtggacatgttacgtcgggctgcctcgacgctagtgtgcttggcacgcatacgctcc
aaccgtgccttgttcttaccgtttcaacagcggatcttaaggctttctgttttgcgggtt
ctggacagtacaattaccaaccatttggcggagattctcttctatttatccagatga
DBGET
integrated database retrieval system
