Pocillopora damicornis (lace coral): 113671805
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Entry
113671805 CDS
T05773
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113671805
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113671805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
113671805
NCBI-ProteinID:
XP_027043861
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSTYRSVGVLDGTDSPVLSSRGTQRSTLSASKVRPWFDNEGLELISNPGSGNGSRHQTPT
PPIETEIKPFKPTQNGLLHFSADASLLNTGDINALDDEGLSALHRAVRLDDVEGVTSLLD
NGADINILGMSGHTPLHAAVRFERSRIVQLLLQKGADPLKENENHLTPLHLAARKGLTEI
SRAMLKDSRVGPSALNKGCITPFHCACLGGNPEVCALLLDGGADVTSKVFSTTPALSLAA
WQGHEEACQLIIETASKRLPSLIDFVNERDEEGKTALHKACDGGFERIVDLLLRNGADSN
AVDWVVCMSPLHSAAKYGHLAVVELLILNGAVIDARNGRLQTPLHSAAGFNHGKIVELLL
EIGADPEARDTSGITPFLLAVTHAASYSVQVLLDKGADKTALDSSLNSCLHLAINYCKTE
MVKTLLGKDKDTLLQLKDKHLKTVFHLAAGMKDSEILEILLQEKDISPLCQRDVKERLPL
HIAAEKGSIHCVEALSRCHGFSFHTQQTDEIGRTPLHLAASNKHAETCRVLLKNGAEVFQ
MDARGFTALHHAVEAGSLQTVKILLDCRLPSTLERVDLSNNTPLHIACMHNRPDILSFLL
DQGANVTAKNKRNMTCLDVAVEWEASEVAMTLMRHPRWEEVLNYYPDDGVCSMDKLIEKL
PNVAEIVLDNCISYSPLPPSHEDFSVRFNLLPLDPNTNSGCSNYFGPACMAKHRREKLLN
HNVTQALLRWKWMILGKFVTFFNMLVFAVFVALFSSFIVKEREKVKLSHASKDEIAIVED
NDSFLSHTPWIIIIFSVVQLVKELIQMFWLRLSYFKDLTNLFELIMFAFVWMFTLSSISE
SFSLTAEVRWSVGVLGLFMSYISLTLYFRRFGGLGLYVTMYVEVLFTFVKVISTFMIALT
GYALVFYVLLKEQGNFSDFWFSTAKILVMMVGELDYTDMLVEHVVNNQTVPGTSFPYVPL
PRLTFALFLVFILMVSIVLVNLLVGLAVGDIESIQRTASLRALIDQVFLVDSIMKSYPKW
ILRRIHKSSLEIKPNQKNFLKRVLLAGSDVSGREFIELLISRKSGSTTPEQARDETQGES
IRNLQATVEAQGRLLQAMADRLRIRE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttatcgctctgttggcgtcctggatggaactgatagtccggttctgtcgtcc
agaggtacacaaagaagcaccctctctgcatctaaagtcagaccatggtttgacaacgaa
ggcctggaacttatatccaaccccggaagtggcaatggatcgcgtcatcaaactcctaca
ccgccaattgaaacagaaattaaaccatttaagcccactcaaaatggcttgctacacttt
tcagctgatgcgtctcttttaaatactggagatataaacgctcttgacgatgaaggcctc
tctgctcttcaccgagccgtccgtcttgacgatgtggagggtgtgacgtctttgttggat
aatggtgcagatattaacatattgggcatgagtggacatacaccccttcatgctgctgta
aggtttgaaagatctaggattgtccaacttctgctgcaaaaaggagctgatcctttaaaa
gaaaacgaaaatcacttgacaccacttcatttagctgcacgaaagggtttaacagagata
tcccgcgctatgttgaaagactctagagtaggaccttccgcattaaacaaggggtgtatc
acacctttccactgcgcctgcttaggtggaaatccggaggtgtgtgcattacttttggac
ggtggtgccgatgtaacttccaaagtatttagcacgactcccgccttaagtttagctgct
tggcagggccacgaagaggcttgccaacttatcatcgagacagcttccaaaagactgcca
tctttaattgactttgtcaacgaacgagacgaagagggcaaaactgctcttcataaagcc
tgtgatggtggtttcgaacgaatagttgacttgcttttacgtaacggtgcagacagtaat
gcggtggactgggtagtatgcatgtctcctcttcactcagcagctaaatatggtcactta
gcggtggtcgaactacttatcttaaacggtgccgttattgacgccagaaacggtcgcctg
cagacgcccttgcatagtgccgcaggattcaatcacggcaagatagtcgaactacttttg
gagattggggcggatccggaagcccgggatacgtcaggaattacacccttcctacttgca
gtgacccatgcagcaagctacagtgtacaggttttgttagacaaaggggcagataaaaca
gctttggactcttctttaaatagctgcctccatttggctatcaattactgcaagacggag
atggtgaaaaccttattaggaaaagacaaggatacattgttacagcttaaggacaaacac
ctgaaaaccgtgttccatttagctgctggcatgaaagattcagagattttggaaattctt
ctacaagagaaagacatatctcctttatgccagcgtgacgtaaaagaaaggcttcccctt
cacatcgcagctgaaaaaggctcaatccattgtgtcgaggctctctccaggtgccatgga
ttttcatttcacacccagcagacggatgaaattggaaggacacctctacatttagcagct
agtaacaaacacgcggaaacatgcagagtcttactgaaaaatggcgccgaagtttttcaa
atggatgcgagaggttttactgcacttcaccacgcagtagaagctggatcactgcagacc
gttaaaattttgctagactgccgtttgccaagtactttagaacgagtagatttaagcaac
aacacaccacttcacatagcgtgtatgcacaatcgtcctgatattttaagtttcctgctg
gaccaaggagctaacgttacagccaagaataaaaggaacatgacttgccttgatgtggcc
gttgaatgggaagcgagcgaagttgccatgacgttaatgaggcatccaagatgggaagag
gtgcttaattactaccctgacgatggtgtctgctcaatggataaattgatcgaaaagctg
ccgaatgtggcagaaattgttcttgacaattgtataagttacagtcctcttcctccatca
cacgaagatttttctgtaaggttcaacctccttccattagatcccaacacgaattcggga
tgcagtaattactttggaccagcgtgtatggcaaaacatcggcgagaaaagttactgaat
cacaatgtcacccaagctttgctgagatggaagtggatgattcttggaaagttcgttact
ttcttcaacatgttagtatttgctgttttcgtcgccttgttttcaagcttcattgtcaaa
gaaagagaaaaagtaaaactttcacatgcttcgaaggatgagatagcaattgttgaagac
aatgatagcttcctgagccacacaccatggatcataattatattttcagttgttcagctc
gtcaaagagcttatccaaatgttttggcttcggttgtcgtactttaaagatctcacaaac
ttatttgaacttatcatgtttgccttcgtgtggatgttcaccctttcttccatctcggaa
tcgttttccttaaccgcggaagtgcgatggtcggtcggggtattgggattatttatgtcc
tacatcagtttgacattatattttcgtcgttttggtggacttggcttatacgtaacaatg
tacgttgaggtgctctttacctttgtcaaagtgatatccactttcatgatcgccctgact
ggttatgccttggttttctacgtactactaaaggaacagggtaatttctcagatttttgg
ttctcaacggcgaagatccttgtgatgatggttggggaactggattatacagacatgttg
gttgaacacgttgtaaacaaccagacagtaccagggacaagtttcccatatgttcctctg
ccgagactaacatttgcgcttttcttagtgttcattttgatggtatccattgtgctagtc
aacttgttggttggtttggcggttggagacattgagtctatccaaaggacagcaagtcta
cgagctttaatagatcaggtgtttttggttgacagcatcatgaagtcgtatccgaagtgg
attctgcgaaggattcacaaaagttcgttggaaataaaaccaaatcaaaaaaatttcctg
aaaagggttctcctcgctggttcagacgtttcgggtcgggagttcattgaactgctcata
agtcgcaaatcaggttcgaccaccccagagcaggcaagggatgaaacacaaggagagagc
atcagaaacctacaggccacggtagaagctcaggggaggcttcttcaagcgatggctgat
aggttaagaattagagagtaa
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