Pocillopora damicornis (lace coral): 113671962
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Entry
113671962 CDS
T05773
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113671962
Enzymes [BR:
pdam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
113671962
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
Other ribosome biogenesis factors
113671962
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
Methyltr_RsmB-F
NSUN5_fdxn-like
FtsJ
Methyltransf_31
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
113671962
NCBI-ProteinID:
XP_027044032
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MAALYSCAAQIVDKVTKKQGTAKNLAINSRFPKKKKLYALVCETLKYRGILEDIFEQTRL
LKLEKKLKHSYALVLVYDFLFGQGIECGGELKQFIFNHKAALQSCLARLKIRAKVHRNED
LLPKPAVETGSIPRYVRVNRIKTTLKDVMNDFENNGYQLVDKQDIASLAAQNSSCKQFMC
DKHLSDVLVFPAGTDLHDHPLYVSGHIILQDKASCLPAHVLAAPPGSHVIDACAAPGNKT
SHVASLMNGSGKIYAFDSDRKRLTVMQTLMKKAGVEYVTMTNCSFLEVNPLGEKYTEVQY
IVVDPSCSGSGIVDRMDGIIDEKEDKLKEEERLLSLAKFQLSVLNHALSFPHVKRVVYST
CSIHQQENEDVVEAALNANRDRFSLEHALPSWTHRGMAVFPEAERCIRASPDQDFTNGFF
VALFVRNDNETVMDHKATESNGLLPGGKRKRSQEDSTQPVNDDVDNDSDSAHSSAHVSLL
PKKKYRKKNKKHQEVNLQEQSKNMNLERNFGRDGGKKKRKRKKKNKKVSVCS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgtactcatgcgctgcacaaattgtagacaaagtgacaaagaaacaaggc
actgctaaaaacttggcgatcaacagtcgctttcccaagaagaaaaaactttacgccttg
gtgtgtgaaacactaaaatacagaggaattttggaagatatcttcgaacaaacaagactt
ctaaaacttgagaaaaagctcaaacatagctatgccttagtgttagtgtatgacttcctg
tttggccaaggaatcgaatgtggtggagagttgaaacagttcatttttaatcacaaagct
gcccttcagtcatgtttggcacgtttgaagatcagagccaaggttcatcgcaatgaggat
ctgttgcctaaacctgctgtagagacaggctcaattccaagatatgtacgagtcaatagg
ataaagacaacactgaaagatgtcatgaatgattttgaaaataatggttatcaactggta
gacaaacaagatattgcttcattagctgcgcagaattcttcatgtaagcagttcatgtgt
gacaaacacctctcagatgtcttggtgtttcctgcaggaacagatctgcatgatcatcct
ctttatgtcagtggacacatcatactccaagataaagccagttgcctaccagcacatgtt
ctagctgccccacccggctctcatgtgattgatgcttgtgctgcccctgggaacaaaacc
agtcatgtggcaagtttgatgaatggttcagggaaaatatatgcatttgacagtgatagg
aagaggttaacagtaatgcaaactctgatgaagaaagctggagtggagtatgtcacaatg
acaaactgtagttttctggaggtaaatcctttaggtgagaagtacactgaagtgcaatac
attgtggtagatccatcatgctctgggtctggtattgtcgacaggatggatggcattatt
gatgaaaaggaagacaagcttaaagaagaggaaaggcttctatcactagccaagtttcag
ttgtctgtgttaaaccatgccttgtcctttcctcatgtgaagagggtggtctattcaacc
tgctccattcatcaacaggaaaatgaagatgtagtggaggcagctttaaacgcaaacagg
gacagattttcgctggagcatgctttaccatcctggacacacagaggaatggctgtgttt
cctgaggcagagagatgtatccgagcgtcacctgatcaagatttcaccaacgggtttttc
gtggcactctttgtgagaaatgacaatgaaacagtgatggatcacaaagctacagaatcc
aatggtttattacccggaggaaagaggaaaaggtctcaagaagactcaacacaaccagtg
aatgatgacgttgacaacgacagcgattctgcacattcatcagcacatgttagtctgtta
ccgaagaaaaaatatcggaaaaagaacaagaaacaccaagaagtaaatttacaagaacaa
tctaaaaatatgaatttggaaagaaatttcggacgggatggtggtaaaaagaaacgtaaa
cggaaaaagaaaaataaaaaggtttctgtttgctcataa
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