Pocillopora damicornis (lace coral): 113671985
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Entry
113671985 CDS
T05773
Name
(RefSeq) ribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113671985
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113671985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
113671985
NCBI-ProteinID:
XP_027044051
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MVVQKFLEFVLLKEQVDPKFASVEKSVNYLFGVQLTREEEDSERCWVKVEGSEHDIRRAK
DYILEVCSRTFSSLEEAEIVWKENNITSTPVDSSSTKQNTSVVEVNNNDCHKDEKELAQK
STDKLLDSNEINQVNRSENAENYFSSGKVSEKECAETAEQTSPSVDVEFASRSAFEMVVN
QTEAKKPSVIVKKGKGDEKGCDSSVSDESLRDFAKKLGYNEDTITTGLSKLGPSADTNSL
LSELVKAQSSVKQLEEGSSTFNYEKPVPVPEDSSYLRPIVIDGSNVAMSHGNQKVFSCRG
IGLVVDWFLARNHLNIKVFVPMWRKNAPRPDSPITNQEVLKRLEEDCILVWTPSRTAANG
KIIKCYDDRYIIKHAADNDGVIVSNDNFRDLMAENHEWKKVIEQRLLMYSFVDDKFMPPD
DPSGRHGPTLDEFLKKGHGKLCPYQRNCTYGKRCRFLHPDRNQVREPNCVPANTAHLPPE
VPYGQVSRLPKPLPPCPPRPLPATPTEFHQKPLPLPPHSEFPAEMARVFPPTLRTGQVVG
IGERRSDPLPRQKQLPPDVQALQDRFQRTHSIGSVQDQACGGAPVGPVSPMLRRGSLPHA
CHPQQYSSLTGHPDIMVRGSMTLPRMQNEKSVVGGDWMIQEQMFGGSPYHYRPQYHSNPP
VSSPSPYKGHPPASLPPNHWNLPPFSQAHHQYPPAQQYHYGPAPPYGYSRTPYGQNNSYM
YRSRAPPIIGGISGDVTDNPEEGDNSSHEDLRIKAYEKLSEIFPDEVEKVLKILDKYSDE
TSIDILTQHMLDDVDE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacagaagtttctggaatttgtgttgttaaaagagcaagtcgatccaaaattt
gcgtcagtcgaaaagagtgtaaattatttgtttggcgtacagctgactcgagaggaagag
gatagcgaaagatgttgggtgaaagtcgaaggcagcgaacatgatattaggcgcgccaag
gattacatcttagaggtttgttcacggactttcagctcccttgaagaagcagagattgtt
tggaaggaaaataacattacctcgaccccagttgacagcagttcgaccaaacaaaacaca
tctgtggtcgaagtcaataacaacgactgtcataaagacgaaaaagagttggctcagaaa
tccactgacaagttattagactctaacgaaataaatcaggtcaatcggagtgaaaacgcc
gaaaattatttttcgtcgggaaaagtatccgaaaaggaatgcgctgaaacagcagaacag
acttcgccgtccgtcgatgtagaatttgcttctcgaagtgcatttgaaatggttgtgaat
caaactgaagctaaaaaacccagcgttatcgtcaagaaaggtaaaggcgacgaaaaaggc
tgcgattcttcggttagtgacgaatcgctaagagacttcgcgaagaaactcggttacaat
gaagacacaatcacaactgggctgagcaagcttggaccttcagcggacaccaattcactg
ttgtcagaactcgtgaaagctcaatcttctgtgaaacagttggaagagggatcgtcgacc
ttcaactacgaaaaaccagttcctgtccctgaagactcgagctacctgagaccaatcgtc
atcgatggaagtaatgttgctatgagtcatgggaatcagaaagtattctcctgtagggga
attggccttgtggtggactggtttcttgcaagaaatcacctcaacataaaagtttttgtc
cctatgtggcgtaaaaatgcaccacgccctgactcgccaattaccaatcaagaggttctg
aaaaggcttgaagaggactgcattcttgtgtggaccccaagcagaacagctgccaatggg
aaaatcatcaaatgttatgatgaccgctacatcatcaagcatgctgctgacaacgatggt
gttattgtttcaaatgacaacttccgcgatttgatggcagagaatcatgagtggaagaaa
gtcattgaacagcgtcttttgatgtactcatttgtcgacgacaaattcatgccaccagat
gaccctagtgggaggcatggtcctaccttggatgagttcctcaaaaagggacatggaaaa
ttgtgtccatatcagcgcaactgcacatatggaaagcgctgcagatttcttcaccctgac
agaaaccaagtgagggaaccaaactgtgtaccagctaacacagcacatttaccaccagaa
gtcccctatggacaagtttcaaggttacctaaaccactgcccccatgccctccaaggcca
ctcccagccacaccaactgaatttcaccaaaagcctctgccattaccaccacatagtgaa
ttccctgcagaaatggcaagggtgtttccaccaaccttgcggacaggccaggttgtggga
attggagagcgcagatccgaccctttgccacgtcaaaaacaactccctcctgatgtgcaa
gcattgcaagaccggtttcagagaactcacagcattggaagtgttcaagaccaagcttgc
ggtggggctccggttggccctgttagtccaatgttgcgacgtggcagtctaccccatgcc
tgtcatcctcagcagtactcatccctaacaggacaccctgatataatggtgcgtggctct
atgacactgccccgaatgcaaaatgaaaagagtgtggttgggggtgattggatgatacaa
gagcagatgtttggagggagcccataccattatagaccccagtaccattccaacccacct
gtcagtagtccatcaccttacaaaggccacccaccagcaagccttccaccgaaccactgg
aatcttccacctttctctcaggcacaccatcaatatcctcctgcacaacagtatcattac
ggaccagctccaccttacggttatagtcgcactccatatggacagaacaacagctacatg
taccgctcacgagcccctccaataattggtggaatctctggtgatgtgacagataatcct
gaagagggtgataactcatcacatgaggatcttagaatcaaggcctatgaaaagctttct
gaaatattccctgatgaggttgagaaagttctcaagatccttgataagtattctgatgaa
actagtattgatatattgacccagcacatgttggatgatgtggatgagtga
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