Pocillopora damicornis (lace coral): 113672379
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Entry
113672379 CDS
T05773
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113672379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113672379
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113672379
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
HECT type E3
113672379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
THDPS_N
Motif
Other DBs
NCBI-GeneID:
113672379
NCBI-ProteinID:
XP_027044461
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MEHNFDMMNHGCRALTYLMEALPRSTAVVVEAVPVFIEKLQVIQCMDVAEQALTALAMLS
RRHGKAILQAGGMSACLLYLDFFSISAQRSALSVAANCCHSIGVGDFHLVADSIPVLSGR
LQHQDKKSVESCCVAFARLVDSFQSNEKHLEELAAHGLLNNLQQLLMMAPPVISTSTFVM
VVRMLAMLCSNSPVIAVQLLKQNVSDTILYLLLGTTEPGEVENAELLSRSPQEFFEITSF
ISELLPNLPSDGIFLVDALLCKPQQKAEQGLWQWRDDRGLWHTYSWIDSKIIEAAYQSGE
DELTLTTLGRTYTVDFNSMQQTNEDTGTSRQIQRCPGGSETSTAQSKTEETKITKSDERL
VVLCEDAKLASSYTCVMFSALYKIFSSSVGPAVRHKCVNAILRVLCHAPPDLLGVVLKRH
PISSLIGGMLQSNDLRVITNALQMAEIVMQKLPDVFHVSFRREGVMHRVRDLANGLLATK
SKLSDKNCSSECLVDTCEIESPGQRATENSQSLPVTRRLGDVLRRKRYSKRPGRGKASSF
PSTSEAHVEINRDQIGFPSSRTMLHDSRAAFLASQVSTRLNSKSAVLSERPAKLETSVAS
SLSENREKILAWIKDQATKFCEEYFDQQKGDSHPALSVLRQLKSASEELALDRETFLPAL
EEVSAVLTNEDNSACAFEILHSGLVPNLLRYITSTEVSDALPQEKRLRIFFHVFMGLPEK
SSPGDLKITTEPNVAPMAALIQKLHLCINQLEQLPVKVHDTPGGAVGARGSQALRFFSSH
QIKCLLQRHPDCEGLRQWKRGPVKIDPLALVQAIERYLVVRGYGKKRENPDDDGSEDDGS
DDDIDESLATELQGQNNSRHQLEILLGDHLLPYNMTVYQAIKQYAQCDEDKDFDDDHGGI
LGRPSIWVSTHTIWFRPLSQNQKEQQTVNSSKSKSGASGTASRTSRKTWKEDESENEMSL
GQLLLVCEPGSFVTSDPSVEVISLMKALHVLNYHWTTLYEGQTRKAFLSSSEFINNKLAA
KITRQLQDPITVITGNFPAWVEELPRKCPFLFPFECRQQLFYCTAMDRDRALSKLQETLP
ELMNTDASDRVAPRFDRKKHTVSRVGLLDQAEKLIGDLGSSQSVLEIQYEGEVGTGLGPT
LEFYALISQEFQRADLEMWRGESMRPSGGTGMISGPVEDVSYVYSPTGLYPAPVSRTAKA
ANVSKLCSKYQFLGKFLARAIMDFRILDIPFCPILYKWLLNQEGTLDLGDLAAVDSVLAQ
SLTQLQQVAQRKKQLEQDSSHTSDSRQLAVDSLTLDDVPIEDLGLSFTLPGHPDFELKRG
GKDMTVTIHELEEYIRLVVQWTLVSGVKRQIDALREGFNSVLPLSNLASFSYTEMELVLC
GNVAEKWDLKCLVESCRPDHGYTHDSRAVKILFEILSGYTQEEQRLFLQFVTGSPRLPVG
GLRSLNPPLTIVRKSFEPPLCADNYLPSVMTCVNYLKLPDYSSKEIMAGKLKLAALEGQR
SFHLS
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggagcataactttgatatgatgaatcatggctgtcgtgccctaacctatctcatggaa
gctcttcccagatcaacagctgtagtagtagaagcagtacctgtgtttatagaaaaacta
caagtgatacagtgtatggatgttgcagagcaagctctcactgccttagcaatgttatcc
agaagacatggaaaagctatcttgcaagctggaggaatgtcagcttgtcttctgtacttg
gatttcttttcaatatctgctcagaggtcagcattatctgttgcagccaattgttgtcac
agcattggtgtgggtgactttcatcttgttgcagattccattccagttttaagtggaagg
ttacagcaccaggataaaaagtctgtagagagttgttgtgtggcattcgctagactggtg
gatagctttcagtctaatgagaaacatctggaagaactggctgcccatggtctgcttaat
aacttgcagcagttgctcatgatggcccctccagtaataagtacaagcacctttgtaatg
gtggtgcgaatgttggccatgttgtgttccaacagtccagtaatagctgtgcagcttctg
aaacaaaatgtgtcagatacaattttgtatttattactgggcaccacagaaccaggggag
gtagagaatgctgagttgctgtcaagaagccctcaagagttttttgaaataacttctttt
atcagtgaacttctaccaaatttgccatcagatgggatcttcttggttgatgctctactg
tgcaaaccacagcagaaggctgaacaaggactgtggcagtggagagatgataggggactg
tggcacacatactcatggattgacagcaagattattgaggctgcataccaaagtggagag
gatgaacttactctcaccacacttggaagaacatacactgttgactttaacagcatgcag
cagacaaatgaagacacaggtacatcaagacagatacagcgatgtccaggagggagtgag
acatctacagcccaatccaagacagaggaaacaaaaatcaccaagagtgatgaacgttta
gttgttttatgtgaagatgccaagctggcttcatcgtacacttgtgttatgttttctgct
ttatacaagatattcagctcttctgttggacctgcagtgagacacaaatgtgtgaatgct
atattgagggtgttgtgtcatgcccctcctgatctgctgggtgtggttcttaaaagacac
cccatctccagcttaatagggggaatgcttcaatcaaatgacttgagagtcataactaat
gctcttcaaatggctgaaattgtcatgcaaaaactgccagatgtttttcatgtatcattc
agaagggaaggagtgatgcacagagttagagacttggccaatgggcttttggctactaaa
tcaaagttatcagataagaactgctcatcagagtgtctggtagatacttgtgaaattgag
agccctggacagagagctacagaaaattcacagtcactaccagttaccaggaggctggga
gatgtgttgcgaaggaaacgttattcaaaaaggcctggcaggggaaaggccagtagtttt
cccagcacatcagaagcacatgttgagataaacagagaccaaattggttttccttcttca
aggacaatgcttcacgacagcagggctgctttcctggcctctcaagtatcgaccagactg
aattccaaatctgcagttctttcggagcgaccagcaaagctggagacatctgttgcaagc
agtctttcagaaaacagagagaagattttggcttggattaaagatcaagcaaccaagttc
tgtgaagagtactttgatcaacagaagggagactctcatcctgcacttagtgtacttcga
cagttaaagagtgcgtcagaggaactggctttagatagagaaacatttcttccagcactg
gaggaagtctctgctgtgctgactaatgaagacaacagtgcatgtgcatttgagatcctc
cacagtggattggtaccaaatcttctcagatatataacatctacagaagttagtgatgcc
cttcctcaagaaaagcggctcagaatatttttccatgtttttatgggacttccagagaaa
agctcacctggagatttgaaaatcacgactgaacccaatgtagcgcctatggctgccctg
atacagaaacttcacttgtgcatcaaccagttggaacagctcccggtcaaagttcatgat
acaccaggaggagcagttggagcaagggggtctcaagctttaagatttttcagctctcac
caaatcaagtgccttctacaaagacacccagactgtgaagggttacgacagtggaaacgt
ggacctgtaaagattgatccacttgctcttgttcaggccattgagagatatcttgttgtt
cggggatacggaaagaaacgagagaatccagatgacgatggcagtgaggatgacggatct
gatgatgacattgacgagtctttggcaactgaactgcaaggtcaaaacaactcaaggcat
caactggagattttattgggagaccatcttcttccttacaacatgacagtttatcaggct
atcaagcagtatgctcagtgtgatgaggacaaagactttgatgatgatcacggtggcatc
cttggcagacccagtatctgggtctctacccatacaatatggtttcgacctctcagccaa
aaccaaaaggagcagcaaactgtcaatagtagtaaatctaagtctggggccagcggaaca
gcttcacgaacctccaggaaaacatggaaagaagatgagtctgaaaatgaaatgtctctt
ggtcagctcctcttggtttgtgaacctggaagctttgtaacttcagatcctagtgtggaa
gtgataagtcttatgaaagctcttcatgttcttaattatcactggacaacgctttatgag
gggcaaacccgtaaagcgttcttgtcttcaagtgaatttataaacaataaacttgcagca
aaaattacgcggcagttacaagatcctatcacagtaataactgggaattttcctgcttgg
gtagaagaacttcctcgaaaatgcccatttctgtttccttttgagtgtcggcagcagtta
ttttattgcactgcaatggatagagacagggctcttagcaaacttcaggaaacattaccg
gagctcatgaatactgacgcatcagatcgtgttgcaccgagatttgataggaaaaagcac
actgtatctcgagtgggtcttctggaccaagcagagaagttgataggtgatcttggtagc
tcacagtctgtactagaaatacaatacgaaggcgaggttgggactggccttggccccact
ttggaattttatgctcttatttctcaagaattccaacgtgcagacctggagatgtggaga
ggagaaagtatgcggccttcaggaggaactggtatgattagtggacctgttgaagacgtg
tcatatgtttactccccaactggcctgtatccagccccagtttcacgcactgctaaagcc
gcgaatgtgtcaaagctctgctccaagtaccagttcctgggtaaattcttggctcgtgct
atcatggactttagaatcctcgacattcccttctgccccatactatacaaatggcttctc
aatcaagaaggcacgctagacctgggtgatctggctgctgtagactcagtcttggctcag
tcgctgacccagctgcaacaggtggcacagagaaaaaaacagctagagcaagactcctct
catacttcagacagtaggcagctagctgttgacagtcttaccttggatgatgtacccatc
gaggatttgggtctgtcctttactctgccaggccatcctgattttgaacttaagcgcggt
ggaaaagacatgacagtcacaattcatgaactggaggaatacatcaggctggtagtacag
tggactcttgtgtcaggtgtgaaacgccagatagatgcactccgtgaaggctttaactct
gtgctgcctctatcaaatcttgccagtttttcatacactgagatggagctggttctttgt
ggtaatgtggccgagaagtgggacttgaaatgtcttgtggaaagttgcagacctgaccat
ggctatactcatgacagtcgtgcggtgaagattctgttcgagatactcagtggttacaca
caggaagagcagaggctatttttacagtttgtcacaggcagcccaaggttaccagtggga
ggcctgcgcagtcttaatccaccgctgaccatagttcgcaagtcgtttgagcctccacta
tgtgctgataactacctgccgtctgtcatgacctgcgtcaattacttgaaactgccagac
tactccagcaaagagatcatggctggcaagctaaagctggctgccttagagggacagcgt
tcatttcatttgtcttaa
DBGET
integrated database retrieval system
