Pocillopora damicornis (lace coral): 113672429
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Entry
113672429 CDS
T05773
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like isoform X1
KO
K19720
collagen type III alpha
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113672429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdam00536
]
113672429
Glycosaminoglycan binding proteins [BR:
pdam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113672429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113672429
NCBI-ProteinID:
XP_027044508
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MSRMDFSEIHEDELVSLGVDFEHGRRGPRPPFRHPGPHPFPPFGPGGPHGPRMPPGGHMP
RPPGPMMMGHPGPHPRGPMGPMMRGHMPGPHGPPGPMGIPGPMRARLPMGEHDIPPPWND
RGRGRRPLGKPLPQRQLSREAPKPKKSITPDKAKKEESKPADGEAKGPPAKKPKKEDDDL
EDLDEEKLLKSDDEGEGANNVDLDAVSIHGDDELDDIDKEIKGLSEGAAENSKKTNSKEE
VKKEQVTPVKKEIKNDSDSEDEGKKDRQRFKSERPKEAQFKIEKHEQKREFKKHDDRNWN
RRDVGRGRGRGGPMMGPPLPGMVRPGMHPPFPPRGPDPFMHGPRPGMGPGLGVGPDHGPG
PRPRFPLGPSGPIPGHMPGPPDGHGAFPPPRPPQGKNIHINPHFRPPPGGRGMPEGPPPM
RGPHLGPLRPDVPGPHMAAPHPGPMRPEVTLPPGPAGDFGPRGPLPARGPHMGPEQGSRP
SMGHDPVTAPRPMGPGGPGPMQGPGQGHGPRSGPIPENDMRPPHVMGAGANALSQPRGPP
QVTPNMVPPHGPLPGRAPTAGGPGAVAHTGAPGGPSPLPGQQHPAMPPRGPTQGMPPTGL
PLGGQVHPGALQSAMRPPAMNQHPEVPMSEPERIVIGNRVTVSNMDVSNPVMRGGIPPPG
YNAAAAMAAAQGANLAAAAAAAAAARQQQFPYGQQYPYDYAAVYGAEWQQLMQQQRDAAY
AAAAYGLEKHTKSHKSKKHHRRYSADSAESDFSSASRSASRSASRSYSRSPARSWTRSRS
LSLSRSRSRSSSRSRSFSRSVSPRTPQTRSPVVRAAKPGPHPRRVDSRREREKERPDRSH
ERERERDRTRERPDRSRDGYRNRERNDREKPRERESHEQREPREPRHDRPRERERERDRG
DREKAKERERERTRDREKPKEGHRRSRSRDRSSHRRESRESRHSENSASKRIVVGPSESK
SKTSGSTPDAKASRVVVTKASSSGKPSNRVVIGSLPEAITPSRLKELLQGVGPIQQLKMS
TTKHKALVTFEKNEHALACRRKFHRTVVDDSQVTVDFL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatggatttttcagaaatccacgaagatgaactggtgagtttgggagttgac
tttgaacatggaagacgaggcccaagaccacctttccgacaccctggaccacaccctttt
cccccatttggtccaggtgggccccatggacctcgcatgcccccaggaggtcacatgcct
agaccaccaggtcctatgatgatgggacatccaggtccacacccacgtggacccatgggg
cccatgatgcgtggccatatgccaggccctcatggtcctccaggtcctatggggattcca
ggacccatgagagcgaggctccctatgggggaacatgacataccacctccatggaatgac
aggggaagaggaaggaggccacttggcaaaccgctacctcagcgacaactaagtagagaa
gcaccaaagcccaaaaagtctataacaccggataaagcaaaaaaagaagagtcaaaacca
gctgatggagaagctaaaggtcctcctgctaaaaagcctaaaaaggaagatgatgacctg
gaggatcttgatgaggaaaagttgttaaagagtgatgatgaaggtgaaggggcaaataat
gttgatttggatgctgtgagtatccatggtgatgatgaactggatgatattgataaagag
atcaaaggcctgtcagaaggagcagctgaaaacagtaagaagacaaattcaaaagaagaa
gttaagaaggagcaagtcacacctgtcaaaaaagagataaagaatgacagtgacagtgaa
gatgagggcaagaaggacagacagcgctttaagtccgagcgaccaaaggaggcacagttc
aagattgaaaagcatgaacaaaagagagagttcaaaaagcatgatgacagaaactggaac
agaagagatgttgggcggggccgtggcagaggagggccaatgatgggacctcctctacca
ggaatggttcggccaggaatgcaccctccttttccacctagagggccagatccttttatg
catggccccagacctgggatggggccaggccttggagtaggaccagatcatggccctggt
ccccgaccacgcttcccacttggacccagtggaccaattcctggtcacatgcctggaccc
ccagatggtcatggagccttccccccaccaaggccacctcaaggaaaaaatattcacatc
aacccacactttagacctcctccagggggaagaggaatgccagagggtccgcctcccatg
cgagggccacaccttggacctctcaggcctgatgtgccagggccccatatggcagctcct
cacccaggtcccatgcgcccagaagtgactctcccacctggccctgctggagattttgga
ccccgcggacctcttccagctagagggcctcatatgggtccagagcaaggatcaaggccc
agcatgggacatgacccagtaacagcaccaaggccaatgggcccaggtggaccaggtccc
atgcaaggtcctggacaaggtcatgggccaagatctggtccaatccctgagaatgacatg
aggccaccccatgtcatgggagctggcgcaaatgcactgtcacaacccaggggacctccc
caagtaacacccaacatggtccctccacatggtcctctaccagggcgtgccccaacagca
gggggcccaggtgcagtagcacatactggagcaccagggggacctagccccttaccaggg
cagcaacacccagccatgccaccaaggggtcccacacaaggaatgccaccaacaggatta
cctcttggaggtcaagtacatccaggtgctttacagtcagcaatgcgaccaccagcgatg
aaccaacatccggaagtacccatgtcagaaccagaacgaattgtcattggaaatcgtgtg
acagtgtctaatatggatgtctccaatcccgtaatgcgaggtggaataccaccacctggt
tacaatgcagcagcagccatggctgcagctcagggagctaatttagctgctgcggctgca
gcggcagcagccgcaagacaacagcagtttccttacggacagcagtatccttatgattat
gcagccgtgtatggagcagagtggcagcagttgatgcagcagcagagagatgcagcttat
gctgcggcagcatatggtttggagaagcacaccaagagtcacaaatcaaagaagcatcat
cgtcgttatagcgctgacagtgcggaaagtgacttcagcagtgcatcaagatcggcgtca
agatcagcttcacgttcttattccagatcaccagcaaggtcttggactcgttcacgttct
ctatcgctgtcccggtcaaggtcgaggtcgtcgtcaaggtcaaggtcattctcaaggtct
gtttcaccgcgcactccgcaaacaagatctccagttgttcgcgcagctaaaccagggcct
catccgagaagggtagacagtcgcagagaacgagagaaagaacggcctgacaggagtcat
gaaagagaaagagaacgagacagaacaagggagcggcctgacaggagcagagatggttac
aggaatcgtgagaggaatgaccgagagaagcctagggagagggaatcacatgaacaacga
gaaccacgtgaaccccgtcatgacaggcctcgggagagagagcgagagagggatagagga
gatcgcgagaaggcgaaagagagggaacgggagaggacaagggatagggagaagccaaag
gaaggtcatcgaagaagtcgaagtcgagaccgatcatctcacagacgagagagcagggag
tccagacattctgagaatagtgcctcaaagcggatcgttgttggaccttctgaaagcaag
agtaaaacatctggttctactccggacgctaaagccagccgtgtggtcgtaaccaaggct
tcaagcagcgggaagccgtcaaatcgagttgtaattggttctttgccggaagcgataaca
ccaagcaggttaaaggagcttctgcagggcgttggtccaattcagcaactaaagatgtcc
acgacaaaacacaaagcactggtgacgtttgagaagaatgaacatgctctggcctgccga
cgaaaatttcataggactgtagtcgatgacagccaagttactgttgacttcctctga
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