Pocillopora damicornis (lace coral): 113672755
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Entry
113672755 CDS
T05773
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113672755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113672755
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113672755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF2524
DUF4164
ATG16
DUF16
Crescentin
Tra1_central
Motif
Other DBs
NCBI-GeneID:
113672755
NCBI-ProteinID:
XP_027044895
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MFGQQNQQNKPVGIFGATPQLGQNTGGFSFGTPAGSTAASSSTSSSGGFAFAAPSQQSGF
QFGSTTTPSATKPGATGGLTFGETPSTTGGFTLGATPTSQPVGFSFGTKSSSSFQFGTPT
ATAATTQQPGGFALNSSSTTGISFGTPATSSGQAASGRFRLGGAGSGFLFSNPAPATTSA
TGGLSLGSTSTAASSQLTGGLTFGKPVATSTGFSFGQSSGLTFGTPNTQQSGLITGGGAP
VGLTQGTNKTTAPTTATPTVGISLGVNVSSAQSGLSFGAVTATASTSNPSTLPTLGATAP
AATTGGFSLGNNLKLGGTAAAPVSTGLSFNLPSATSTSATPSSGSSFGLTTTAAPSTASS
SVSTVPTLSTKLSGIGTTAVTTASGLPASGPSGLKFSTLQTTSLSTATTTVASAPGTIAS
TASSSAPGAGAPSNVPQLTYKQLEELINKWALELADYEKTFLDQAAQVNSWDRLLMENGE
KITELNAGVENVKAEQKRLDQELDFIMAQQQELEEMLKPLEDAVSSSNSGSRQLQQADKE
RDFTYKLAKDVDGQLKQMVQDLKSIIEHLNTANTQQQDSDDPIAQIAKILNAHMNSLQWI
DQNSGILQRKVEEISRLSETRRKEQERNFRLAFD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtcaacaaaatcagcagaataagcctgttggcatatttggagctacgcctcag
cttggccagaatacgggagggttcagttttggtacacccgcaggaagtactgccgcttcg
agttcaacttcttcgtctggcgggttcgcctttgctgcaccatcacaacaatcaggattt
cagtttggctcaactaccacaccatcagccacaaaacctggcgccacaggaggccttact
tttggtgagacacctagcactacaggaggtttcacactgggtgcaacacctacatctcag
ccagtgggattcagttttggcacaaaatcaagtagcagttttcagtttggtacaccaaca
gcaactgcagcaacaacacaacaacctggggggtttgcattaaattcttcttcaacaact
ggaatttcctttggtacacctgccacatcttctggtcaagcagctagtggtcggtttagg
ttgggtggagcaggatcaggctttttattcagcaaccctgcaccagcaaccacatctgca
acaggaggcctctccctgggttctacatccactgctgcttcctctcaattaactgggggc
cttacctttggaaaaccagttgctacaagcacagggttcagctttggtcagtcctcgggc
ttgacatttggcactccaaacactcaacaaagtggactgataacaggtggtggagcacca
gtagggcttacacaggggacaaacaaaactacagcacccacaacagcgactccgactgtg
ggtatttcacttggagttaatgtgtcttctgctcagtcaggactgtcttttggggcagtc
actgcaacagcatctactagtaaccctagcactctacctacgcttggggctactgcccca
gcagctaccactggtggattttctcttggaaacaacctcaaattaggtggcactgcagct
gccccagttagtactgggttgtctttcaatctaccatctgcaacaagtacttcagcaaca
ccaagttcagggtcatcatttggattaactacaactgcagcacctagcacagccagcagt
tcagtctccacagttcccactctgagtacaaagctttcaggaataggcacaactgctgtt
acgactgcttcagggttacctgcatctggaccatcaggactaaaatttagcactctgcaa
acaacatcattatcaactgcgacaacgacagtggcttcagcacctggaaccatagctagc
acagcaagctcctctgcacctggagctggagctcctagcaatgtaccacaattgacttat
aaacagcttgaagaactcattaacaagtgggctttggaactagcagactatgaaaaaacg
tttttggatcaggcagcacaagtgaattcatgggataggcttcttatggaaaatggagaa
aagatcactgagcttaatgctggtgtggagaatgttaaagcagaacaaaaaagacttgat
caagagttggactttattatggcccaacaacaagaactggaggaaatgttgaagccattg
gaagatgctgtaagttcaagcaactcgggcagcaggcaactccagcaggctgataaggag
agggacttcacgtacaaattggctaaagatgttgatggacagttaaagcaaatggtgcaa
gatctcaaatcaatcattgaacatcttaatactgcaaatactcagcaacaggactcagat
gaccctatcgcacagattgccaagattttgaatgcacacatgaattcactacagtggata
gatcaaaattcaggaatccttcagagaaaggttgaagagatttctcgcctcagtgaaaca
aggagaaaagaacaggaaagaaactttagattggcatttgattga
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