Pocillopora damicornis (lace coral): 113672791
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Entry
113672791 CDS
T05773
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
pdam03015
mRNA surveillance pathway
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113672791
09122 Translation
03013 Nucleocytoplasmic transport
113672791
03015 mRNA surveillance pathway
113672791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113672791
03041 Spliceosome [BR:
pdam03041
]
113672791
03009 Ribosome biogenesis [BR:
pdam03009
]
113672791
03012 Translation factors [BR:
pdam03012
]
113672791
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113672791
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113672791
mRNA cycle factors
Stress granule specific factors
113672791
Spliceosome [BR:
pdam03041
]
Complex C
Other components
EJC/TREX
113672791
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
90S particles
Helicases
113672791
Translation factors [BR:
pdam03012
]
Eukaryotic type
Initiation factors
eIF-4
113672791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
UvrD-helicase
Helicase_RecD
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
113672791
NCBI-ProteinID:
XP_027044975
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSRKRKVVADDEEDPTKIEFSTSEEVDVVPTFDQLKLREDLVRGIYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATLSISVLQSIDIQTRETQALILSPTRELAQQIQKVILA
LGDYMSIQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRSIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTQKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLVEKMREANFTVSAMH
GDMPQKERDAIMKEFRSGQSRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaagaaaagttgtagccgacgatgaggaagatccaaccaagatcgaattc
tcaacttcagaagaggttgacgttgttcccacattcgaccagttaaaacttcgcgaagac
ttggttcgaggcatttacgcttatggctttgagaaaccatcggcaattcaacagcgtgct
attaaaccgattatcaaaggaagagacgtcattgcacaggctcagtctggaacaggaaaa
acagccactctgtccatctctgtacttcagtcaatagatattcagacaagagaaacacag
gctctgattttgtctccaacccgagagcttgcacaacaaattcagaaggtcattcttgct
ctgggtgactacatgagtattcaatgtcatgcatgtattggaggaacaaatgtaggagag
gacatcagaaagcttgattatggacagcatgttgtgtctggtacacctggcagagttttt
gacatgataagaagaagaagcttgagaacccgatctataaaaatgttggtgctggatgaa
gcagatgaaatgctgaataaaggttttaaggagcagatctatgatgtttacagatatctt
cccccagccactcaggttgttctgttaagtgcaactcttccacatgaaatcttggagatg
acgcaaaagttcatgactgacccaatcaggattcttgtcaagcgtgatgagttgacattg
gaaggcatcaaacaattctttgtggctgtggaacgtgaagaatggaagtttgacaccctc
tgtgatttgtatgacacccttaccatcacacaagctgtcattttctgcaacacaaaaaga
aaggtggactggcttgtggagaaaatgcgagaggcaaacttcactgtttcagctatgcat
ggtgatatgccacaaaaagaaagagatgccatcatgaaagaatttagatctggacagagt
cgagtgctgatctcaacagatgtgtgggctcgaggcatagatgtgcagcaagtgtctctg
gttatcaactacgacctgccaaacaatcgtgaattgtacattcacaggattggtcgctct
ggtcgatttggtcgcaaaggtgttgccattaactttgtgaagtcggatgacatcagaatt
ttgcgtgacattgaacagtactacagtactcagatcgatgaaatgcccatgaatgtggct
gatctcatttaa
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integrated database retrieval system
