Pocillopora damicornis (lace coral): 113673229
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Entry
113673229 CDS
T05773
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113673229
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113673229
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113673229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
Rad50_zn_hook
Endonuclease_7
GAGA
Motif
Other DBs
NCBI-GeneID:
113673229
NCBI-ProteinID:
XP_027045407
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MLIPHMEKLSGPAYIPNPLTSPALMVLASTAEAARSTASSPGPMSDYHAIYSSPSNRYID
GEAVHRMVLNSTHYQHRSSHLALYPGSEHYTERMPHEYGPHFIQMHHHLGGGLLHKTSGP
TAVFNGTGAFRRVVPPEHAFPFHHLQHPRNLLEREHHVDSLYKNSELDKETNLERGLKDR
ISPRKPDKDGETRLIGDQTKSPSPMRRASSHDETDNSNIETVNIKREHADQIECCKGSEA
EDDDSNGEMQSKGRQRSSSSQAPCCPVCGTSIRPGEMESHFAWEMERFCEENRKPRRSQR
ESALQARKNGETFQKKVKQEGKRDLHHRHDDTPASTRQQTYLRVCANRMARSGRSNSLKP
TRSRSSQSSPVNSPLAGEEGPSGIKTTTCPVCEEVIHGNGDELNSHVEACLRKKEGRAVD
DIGDANGQDVFEEYEWAGQTRIRATTLLEGGFRASGFQTGIKRKREEEDDGDLDIDGDDS
EEYGKPQYTEADVIPCGADEPDEDNVRQALRGAVISGENSPVEKKSPMRELPSEGQTEDN
SMQTKVDKHSEEKDHETGNPDLVISSLKVRIKEMEMKKFEKMKCLICMEPYTNPLASISC
WHVHCEECWLRTLGAKKLCPQCNMITSPSDLRRIYL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcctcacatggagaaactgagtggcccggcatacatcccaaatccattgacg
tctcctgcccttatggtactagcatcaactgctgaggctgcacgttccactgcttcttct
cctggaccaatgagcgactaccatgcaatatactcatcaccatcaaaccgctatattgat
ggcgaagctgtgcacagaatggtgttgaattcaacccactaccagcatcgatcctctcat
cttgctctctaccctggctcagagcattacactgaaagaatgcctcacgaatatggacca
cattttattcaaatgcatcaccacttaggtggagggcttctccacaaaacaagtggaccc
actgctgtattcaatggcactggtgcattccgcagggttgtgccacctgaacatgccttc
ccttttcatcatttgcaacatccacgaaacttgctggaacgagaacaccatgtcgatagc
ttgtacaaaaactctgaactagataaagaaacaaacttagaaaggggtttgaaggacagg
atttctccaagaaaacctgataaggatggtgaaacacgactgattggagatcaaacaaaa
agccccagcccaatgagaagggccagctcgcatgatgagactgataacagtaatattgag
actgtaaacatcaagagagaacatgcggatcagattgagtgctgtaaaggtagtgaagct
gaagatgatgacagcaatggggaaatgcaatctaaaggaagacagaggtcatcttcaagt
caagcaccatgttgtcctgtctgtggcaccagcatcagaccaggtgaaatggaaagtcac
tttgcttgggaaatggagagattctgtgaagaaaacaggaaaccgagaagaagtcaaaga
gaatctgctttacaagcaaggaagaatggggaaactttccaaaagaaagttaagcaagag
ggtaaacgtgatctccaccatcgacatgatgacacaccagccagcacgagacaacaaaca
tatttgcgagtgtgtgcaaacagaatggcaagaagtggccgctcaaattctctcaaacct
acaaggtccagaagttctcaaagctccccagtgaactcacctctagctggagaggaagga
ccctcaggaatcaagaccaccacgtgtcctgtgtgtgaagaagtcatccatgggaatgga
gatgagttaaattctcatgtagaagcttgcttaagaaagaaggaaggcagggctgttgat
gacattggtgatgccaatggtcaggatgtttttgaagaatacgagtgggctggacaaaca
agaatacgagctacaactctgttggaaggtggctttagagcttcaggctttcaaacaggt
attaaacgaaaaagggaagaggaggatgatggagaccttgacatagacggagatgattcg
gaagaatatggcaaacctcagtacacagaagcagatgtaattccttgtggtgctgatgaa
cctgatgaagataatgtcagacaagctcttaggggagcagtgatcagtggtgaaaattct
cctgttgagaaaaaaagtccaatgagagaactgccctctgagggtcaaacagaggataat
tccatgcaaacaaaagttgacaaacatagtgaagaaaaggatcatgagacaggtaaccca
gacctggttatcagttctctaaaggttcgcataaaggaaatggaaatgaagaaatttgag
aaaatgaagtgtttgatatgcatggaaccctacacaaatcccttggcttcgatatcttgt
tggcatgttcactgtgaggagtgctggctcagaacactgggtgctaagaagttgtgtccg
cagtgcaacatgattacatcgccatctgaccttaggagaatttacttataa
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