Pocillopora damicornis (lace coral): 113673233
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Entry
113673233 CDS
T05773
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam02010
ABC transporters
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113673233
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113673233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdam02000
]
113673233
Transporters [BR:
pdam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113673233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
Trefoil
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
113673233
NCBI-ProteinID:
XP_027045417
LinkDB
All DBs
Position
Unknown
AA seq
2459 aa
AA seq
DB search
MKFLDQLKLLVWKNFTLRKRQHLRNLVEIVWPLVLFIILVAIRNRKNYGATNMPDSIYRP
RALPSAGFFPFARSFLCDFKNTKTNDPDELLNGLPNLRSSSLGRLIEDALPLMANSTVRE
RILRINSDRSNFERDYQAWSDLVRSRQLQWRGYNLSAVPLDQLLKDPAEFQEFLYNKTNL
SPRVISELLSSTVNVQKIAEFAQPYMMSTSDSLSWPPQNPLSYFPFLSSGESQQRNLLWA
LLLWRIEDSLRSEGRVSGSLVRQVICDAQSPVNLGEILSGPGNVTEVKMALCKLNNTVLG
ELGSELQTQIKVPNVTDLQSYRGNLTDVLNSLTNDYRNIAEDVQALESLSQVSRDYFYLM
QEFNDRDNGGGFRETLCGNGRSLPEDDGTGSGGGSNGSQGQGWQQAPLGLLAAACGQDLP
NGTFDDVPPGVNPIDYYLNMTQNMNLARYDDDEEENAKRKADEKSCSNLTSVYDKYNVTG
DKDSCTVIDPKWRVDCGWPGISAEQCKRRGCCFDSSKPGTRFCFYKAEDAGCNCYLNQFV
RSVGGVTGNAGQGDRDTGFVQFSSLFLKGKILYTPDNNVTRYIIQQIKNELSDITRIRDF
ASWWVNNSDYIHKSVLNYTNLLKRPLDSRICELSNVLRTGANPDWSEVSLNLLNSSARRN
ITIIPESFNVTTVLNSLDQLFGTILRVFKCASHEYFEGYKDEDSLVKRAINTSEVPAIAS
LVFEDSVGDLDNVPKFIKYKIRQDVDYTPATNRIRRWYWRPGPQDSFFKQRYFNFGFLYL
QDLIDRALMNILLNETIEEPGVYMQEFPYPCYVKDKFVFYIGGTMPLFMTLAWIFSVAMI
IRGVVHEKERRLKEVMKVMGLGNGVHWVAWFINSSILMVITIALLVAVLKGGKILWHSNP
VVIFLFLFVFMIATIMMCFLISVFFARANLAAACGGIIFFVTYLPYVVVRWFEQYMTTGQ
KAIASLLSTTSFGVCCNYLARYEEQGVGAQWSNFFSSPVSGDGFSLGYAICMMMIDAVIY
GILTWYIEAILPGQYGIPRPWYFPFQKSYWFEVANKKVLEVDASGTQRVTSRSESRGAVS
YRSDSGGMDEVAFQDEDRCSVTEKEPTQLPLGCSIKNLVKIYKDGNKVAVDGLSLNLYQG
QITSFLGHNGAGKTTTMSVLTGLFPPTSGTAIVNGYDIRKDIDLVRKSLGICPQYNVLFD
NLTVSEHLWFYASLKGMPKEDIPAEVERFLKDVGLEDKRHELSSCLSGGMKRKLSVAMAF
VAGSKVVILDEPTAGVDPYARRGIWDLLLYYKTGRTVLLSTHHMDEADILGDRIAIISQG
KLQCCGSSLFLKGHYGNGYYMTLTKKAPEERPGTARTLKDVTLMGSGPSTGSSLDEGVGM
DSLDASEQGSLNSVPAKSSSDPSLHVTEVFCKESAVTSFVKAYIPSAELIEDIGSELTYV
LPTELAGEGRFQDLFEELDRNLDKLHIGSYGVSDTTLEEVFLKVAEEANAEEEDMLAAEM
PKRRPSFRTQLSRSSRISDSYNDREQLLADDSLESNAEDDTPSVLDALDGVYDGEKRLTG
VKLLKGQFWALLVKRFHHTRRNRKGFVSQILLPAFFVCLAMLVSQIRPVSEMPALELNTD
MFLDLDPHEHYLAFALDDNGKSVLTQNMMDMLVQYPGVGTSCLENSCKRKPIKFSPAPKE
NVSTLQCDCRSTGTAKCPAGAGGPRPSQWQSFTGDRLQNLTGRNMTDYLLKTYHNFIRKR
YGAVTLGDNFRNLPSSFSQSNVSYLSGIFKQRNAKAWYNTKGYHAAPTFLNILNNVILRG
KAREKGLNASLFGINTFNHPMNYTKEQLSEENLFNRIVDVLVAICVVFALSFVPASFVVY
LVNERACKAKHLHLVSGVRPFIYWLASYVWDLFNYLIPAVCCIFIFLAFGEDSYTSSSNF
APTFLLLILYGWAITPLMYPASFLFKESSTAYIVLICVNIFIGINTTLATFILEFFVDDK
ELIAVVEMLKKIFLIFPNFCLGRGLIDLARNQFMDVFERFGQNLVRDPFSWDITGRNIMM
LIIQGFVFFFFTVLIEYRFFLPKRRVDVTLKPLENEDEDVEKERERIERGEGTDDILRLK
NLTKVYKTRRMRNVAVNRLCVGVPKGECFGLLGVNGAGKTSTFKMLTGDISVTSGEAFVD
GYSVLTDIHNAHQSMGYCPQFDGLDSKLTAVEHLRLYARLRGVPEKDVKQVVESLIARMN
LTEYANRCAGGYSGGNKRKLSTAIALVGNPPIVFLDEPTTGMDPKARRFLWNVITSLVKE
GRTVILTSHSMEECEALCSRVAIMVNGQFKCLGSPQHLKNKYGDGYTVTLRIGGENPNLE
AVSEFIKSLFPSAVLKDQHHNQLQYQFPSQGLVLSKVFGHIEANRKIFDIEDYSVSQTTL
DQVFINFAKNQTDGEENEDVASYPREFAISEPPYRDEDAGPRASFVRLSDYPRFGDVEV
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttggaccaactcaaattactcgtatggaaaaactttacgcttcgaaagcgt
cagcacctgagaaatttggtggaaattgtttggccactagtgctctttataattctggtt
gcaatacgtaatcgtaaaaattatggtgctacaaatatgcctgatagtatttacagacca
cgtgcacttccatcagctggttttttcccatttgcaaggtcatttttgtgtgactttaaa
aacacaaaaacaaatgatcctgatgagctgctgaatggattgccaaatctgagaagttca
agtttgggtagattgattgaggatgcccttcctcttatggcaaacagcacagttagagaa
agaattcttagaattaattcagatcgctcaaattttgagagggattatcaagcttggtct
gacttagtgagatctaggcaactacagtggcgtggatataatctatcagctgtcccactt
gaccagttactgaaggatcctgctgaatttcaggaatttctttacaacaaaactaatctc
agcccaagagtgatatcagagctcttaagtagcacagtgaatgtgcaaaagattgcagaa
tttgctcagccatatatgatgtcaacatcagactcattatcatggccacctcaaaatcca
ctcagctactttccattcctgtcatctggtgaaagccaacaaaggaacttactttgggct
ctgcttttatggagaattgaagatagtcttaggtctgaaggaagagtcagtggcagtctt
gtgaggcaggtcatctgtgatgctcaatctccagttaatcttggagaaattctcagtggc
cctggaaatgtgactgaggtgaagatggctttgtgcaaactgaataacactgttcttggt
gaacttggaagtgaattacaaactcagatcaaagtgccaaatgtcactgaccttcagagt
taccgaggaaatttgacagatgtgcttaactccttaacaaatgattatcggaatattgct
gaagatgttcaagccttagaatccctctctcaggtctcaagggactatttttatcttatg
caagaatttaatgacagagataatggtggaggtttccgagaaacactttgtggtaatggt
cgcagtctgcctgaggacgatggtactggaagtggcggtggatcgaatggaagccagggc
caaggctggcaacaagcccctcttggattgttggcagccgcgtgtggccaagatttgccg
aatggtacttttgatgatgttccacctggcgtcaatcccatagactattatttgaacatg
acgcagaatatgaatttggcccgatatgatgatgatgaagaagaaaatgcaaaaaggaaa
gctgatgaaaagtcttgctcaaatcttacatctgtttacgacaagtataatgtcactggg
gataaggactcttgtacagtcattgatccaaagtggcgagttgactgtggttggccaggc
atctcagcggaacaatgcaaacgaaggggttgctgttttgattcctcgaaacctggaact
cgcttctgtttctacaaagctgaggacgcgggatgtaactgttatttgaaccagttcgta
cgcagtgtgggcggcgtaaccggaaacgcaggtcaaggggatagagacacgggatttgtt
caattcagctcattgttcttaaagggaaagatcctgtacactcctgataacaatgtgacc
cgttatatcattcaacagataaagaatgagctgtctgatattactcggatacgagacttt
gcctcctggtgggtgaataattcagactatatccacaagagtgttttgaattacactaac
ctgctcaagagaccactggactcgaggatttgtgaactatcgaatgtcctgagaactgga
gcaaacccagactggtctgaggtgtctttgaacttgttaaattcttctgctcgtcgtaac
attacgataataccagaatcatttaatgtcaccactgtgctgaatagcttggatcagttg
tttggaacgatcctcagagtctttaaatgtgcatcgcatgagtactttgaaggctataag
gatgaagattccttggttaaacgtgccattaatacgtctgaggtaccagctattgcaagt
ttagtgtttgaagattctgtcggcgacctcgataatgttcccaagtttatcaagtacaag
atacgacaggacgtggattataccccagctacaaacaggatacgtcgttggtattggcgc
ccaggccctcaagatagcttcttcaaacagagatacttcaattttgggtttttgtacttg
caagacttgattgatcgcgctttgatgaacatattgctgaatgagaccattgaggaaccg
ggagtatacatgcaggagtttccttatccatgctacgtcaaggacaagtttgtattctat
atcggtggcacaatgccgttgttcatgaccctggcctggatattcagtgtggcaatgata
atcagaggtgttgttcacgagaaggaacggcgtcttaaagaagtcatgaaggtaatgggt
cttggtaatggtgtgcactgggtggcttggttcattaacagctcgattcttatggtcatc
acaatagctttacttgttgctgtcctgaaaggcggcaagatcttatggcacagtaatcct
gtggttatcttcttgttcttgttcgtgttcatgatcgccactattatgatgtgtttcttg
atctcggtgttcttcgcccgagcaaacttggccgcagcttgtggaggaatcatcttcttt
gtgacctatttaccttatgtagtggtgcggtggttcgagcagtatatgactacgggacag
aaagctattgcgagtttactatccacaacatcctttggtgtctgctgcaattacttggcg
cggtatgaagagcagggggttggtgcccagtggtcaaacttcttctcgagtcctgtttca
ggcgatggtttcagtctaggttatgcaatatgtatgatgatgattgacgctgtcatttac
ggcatcctcacttggtacatagaagctattttgccaggtcagtacggtattccacgaccc
tggtacttcccattccagaagtcttattggtttgaagttgccaacaaaaaggtcttggag
gttgatgcatcgggtacacagcgagtaaccagtcgctctgaaagcagaggagcggtgtcc
tacagaagtgatagtggaggaatggacgaagttgccttccaagacgaagacaggtgtagt
gtgacagagaaagaacccactcagctccccttaggatgttcaatcaagaacttggttaag
atttacaaagatggcaacaaagttgcggtagacggattgagtctcaacctgtaccaagga
caaattacgtcatttctcggccataatggcgctggaaaaactactacaatgtctgtattg
accggtttgttccccccaacatcgggtactgccattgttaacgggtacgacatccgaaaa
gacatcgatttggttcgaaaaagcctcggaatctgcccacaatacaacgttttgtttgat
aatttgaccgtgtctgaacatctgtggttctatgcttcgctgaaggggatgcctaaggaa
gatatcccggccgaagttgagagattcttaaaagatgttggcttggaggataagagacat
gaattatcttcttgtctctctggcggaatgaaacggaaactctccgtggccatggccttt
gtagcaggctctaaagtcgtcatcctggatgagcccacagctggtgtggacccatacgca
cggcgaggaatctgggacttgcttctctactacaaaacaggccgcactgtgcttctctcc
acgcatcacatggacgaggcagacatcttgggagacagaatcgccattatctcacagggg
aagcttcagtgctgtggttcttctttgttcctcaagggacattatggcaacgggtactac
atgacactcactaagaaggctccagaggagaggcctggtacggcaaggaccttaaaggac
gtgacgttaatggggtcgggcccttcaaccgggagctctctagatgaaggtgttggcatg
gactcattggacgcttcagaacaagggagcctcaattccgtgcctgcaaaatcctcctca
gacccctctctgcatgtcactgaagtgttctgcaaggagtcagcggtaacttccttcgtc
aaggcctatatcccctccgctgaactgatcgaggacattgggtccgagctaacttacgtt
ctgcctactgagttagctggagaaggccgcttccaggatctgtttgaagagcttgataga
aacttggataaactacacattggtagttatggcgtgtcagataccactcttgaagaggtt
ttcttgaaagtagccgaagaagccaacgccgaagaagaagacatgcttgccgctgagatg
cccaaacgccgacccagtttccgcactcagttgagccgcagttcaagaataagcgacagt
tacaatgacagagaacagctattggctgatgatagtctagaatcaaatgcagaggacgac
accccctctgtgttggatgctctggatggagtttacgacggagaaaagagactgacaggt
gtcaagttactgaaaggacaattctgggctctgctagttaaacggttccatcataccaga
agaaatcggaaaggattcgtttctcagattctgctacctgctttctttgtctgcctggcc
atgctcgtgtcacagatcagaccagtttcagagatgccagcacttgaactgaacaccgac
atgttcttagacctcgatccacatgagcattacttggcgtttgctttggatgacaatgga
aagtcagttttgacgcaaaacatgatggatatgctggtgcagtatccgggagttgggacg
tcctgtttggaaaattcctgtaaaagaaaaccaataaaattcagtccggctccaaaagaa
aatgtcagtactttacaatgtgactgtcgatcaaccggaactgcaaaatgtcccgcgggt
gccggcggccctaggccttctcagtggcagtcgtttactggtgacaggctacagaacttg
actgggcgcaatatgacggactatctgctcaagacgtatcacaattttattcgaaagaga
tatggagctgtaaccctcggagataacttcagaaatctgcctagctctttctctcagtca
aacgtttcgtacctcagcggtatttttaagcagcgcaatgcaaaggcctggtacaacact
aagggttatcatgctgctccgacattcctaaacatactgaacaatgtgatcctcagaggc
aaggctcgcgagaaaggactgaatgcgtcactgtttggtattaacacctttaatcaccct
atgaactacaccaaggaacagctgagcgaggaaaatcttttcaaccgtattgttgacgtg
cttgtggccatctgtgtggtgttcgccttgtcgttcgttcccgccagctttgttgtctac
ctagtcaacgagcgagcctgcaaagccaagcatctgcacctggtcagcggtgtgcgcccg
ttcatctactggctcgcttcgtacgtctgggacttgttcaactaccttattccagcagtg
tgttgcatcttcattttcttggcctttggtgaagactcttacacttcatcaagtaatttc
gcaccgaccttccttcttcttatcctttacggatgggccatcacacctctcatgtacccg
gcgtcttttctattcaaggagtcaagcacagcttacatcgttttgatttgtgtcaacata
tttattggaatcaacactactctggctacattcatcttggagttctttgttgacgataag
gagctcattgcggttgtcgagatgctgaagaaaattttcctaatttttccaaatttctgt
ctgggccgaggattaatcgatctagctagaaatcagtttatggatgtatttgagaggttt
gggcaaaatttggttcgagatccattcagctgggacatcactggccgaaacattatgatg
ttgatcattcaaggctttgtgttctttttcttcactgtcttgatcgaatatcgcttcttc
ctgccgaaaagacgggtggatgtcaccctcaaaccattagaaaacgaagatgaagacgta
gaaaaggaacgagaacgaattgaaagaggagaaggaacggatgacattctgcgactcaag
aatctcactaaggtgtacaaaactagacggatgagaaacgtggcggtgaatcggctgtgt
gtcggggtccccaaaggcgagtgttttggattgcttggagtaaacggcgctggaaaaaca
agcaccttcaagatgttgacaggcgatatttcagtaacttcaggagaagcctttgtcgat
ggctacagtgtcttaactgacattcacaacgcgcaccaatccatgggatactgtcctcag
tttgatgggctggatagtaagctgactgccgttgaacaccttcgactgtatgcacgcctc
agaggagttcccgaaaaagacgtcaaacaggtcgtcgagagcctcattgctcggatgaat
ttgactgaatacgccaacagatgtgcaggagggtacagcggaggaaacaagagaaaactt
tccacagctattgctttagttggcaatccaccaattgttttcctggacgaaccgaccaca
ggtatggatccaaaagctcgccgattcttatggaacgtaatcactagtctcgtaaaagaa
ggacgcacagtcattttgacttcccacagtatggaagaatgtgaagcactgtgtagtcga
gttgccatcatggtcaatggacaatttaagtgtctcggcagtccacagcacctcaagaac
aaatatggagatggctatacagtgactctgcgaattggaggagaaaatcccaatctggaa
gctgtgtcggagttcataaaaagcttatttcctagtgctgttctcaaggaccagcatcat
aaccagttgcagtatcaattcccatctcaaggccttgttctctctaaagtgtttggtcac
atcgaagccaaccgaaaaatattcgacattgaagactattccgtttcacagacaaccctt
gatcaggtgttcattaactttgcaaagaatcagacggatggtgaagaaaatgaagacgtt
gccagttacccgcgtgagttcgcgatcagcgaaccgccgtaccgtgacgaggacgccggg
ccaagagcgtcgtttgtccgtttgtccgattatccacgttttggggatgttgaggtctga
DBGET
integrated database retrieval system
