Pocillopora damicornis (lace coral): 113673377
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Entry
113673377 CDS
T05773
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113673377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113673377
03016 Transfer RNA biogenesis [BR:
pdam03016
]
113673377
03029 Mitochondrial biogenesis [BR:
pdam03029
]
113673377
Enzymes [BR:
pdam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113673377
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
113673377
Transfer RNA biogenesis [BR:
pdam03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113673377
Mitochondrial biogenesis [BR:
pdam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
113673377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
GCV_T
Motif
Other DBs
NCBI-GeneID:
113673377
NCBI-ProteinID:
XP_027045579
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MASSNARNSTEKERISRKRKRNSSIPGFAPTSSSTPAVNSQAPRSINVEQFAEARALEIK
NMVAAITEADKSKGKRVFQTLPNHMRRRAMSHNVKRVPARLRQRALYEMHNSSSKPEGQK
KKSRYHRRRPKNLLEEYTRRQRKHVWLETHIWHAKRMKMIDTWGYRLADHPNDKGYRASY
RATKNNCILQDLSYYGCIEVVGVQHQIIKAMNHLTSQETGLTFAAKYYLTGKREGHLMLY
KLDQFPQGAICPVSFLWRQMKTTDTTTITENMQHRENDELIKEIVDSGNVTNNHSMEASD
EMPMKVDTSQLWVWCHPASFSSVFEAISEACKSVGRTSVEKGRCFPDKDDNPDQETQSCN
FVNGFEHPKLRVISRRYDLLRLRLTGPESHALLTNTLKLSSGTSQKHCESKSNKNSQNNA
TFIKDKGDHRRTSKWWEQILNNPSDSTAQSLLWEKLRKVSSPSVLPSGCVIGLTVHDPRL
YLPGKKKNIMQATEDNDSEDSDYCAEIASAPSEMMNKVDKSTSKQPSFEDLMANWPTDVA
GSHIWEEAVCREVKETKLSEQDLNRKRSAFLVPGSQLDLKPDEISHIPLLLIQQPGSPGD
CRDGAGYGSGWDIILPCGWAMAFWMAFVYRGARTGGLRESQTLALEQGVPFFPNDFPDTP
SGQAYNENLKADGEAQYGRYPPAKRPNYDKLGIKSPFCPPWKELVEDWSLSEPDSGGKAV
ESTKTVDRNIESNTIKVESSSNNVSFCKPFYVLRSRSKLAALRNFVLRGKTKQTKGKGLK
DFVTTTKAPLPMNNDLSAIVKEDANSLVCVLVRMVGRNVPTPNSTLAIPFSEDITGFTKC
KDTSSPVEPLHKGVLARTSGKSLRNLCKREIVGFVSSGHFSLARGCGFGVGFCALPGLVK
LISSTSDRGEVMVLVRSPTTQQYRCAHLTIF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgaatgcacgaaatagcacagagaaagagcgaataagtcggaaaagaaaa
cgaaacagtagtattccaggttttgcaccaacttcatcgtcaacacctgcggtaaactct
caagctccgagatcaataaacgtagaacaattcgctgaagctcgcgcattggaaatcaag
aacatggtagcagctatcacagaagctgacaaatctaaagggaagcgtgtgtttcaaacc
ctaccaaaccacatgaggaggagagcgatgagccacaacgtcaaaagagtgcctgctcgt
ctccggcaacgtgctttgtatgagatgcataactcaagcagtaaacctgaggggcaaaag
aaaaagagtaggtatcatcgccgtcggcccaaaaacctgcttgaagaatacactcgtcgg
cagcgtaagcatgtctggcttgaaacacacatctggcatgcaaagcgcatgaaaatgatt
gatacttggggttacaggcttgctgatcatcccaatgataaaggctacagagcaagttat
agagccactaagaacaactgcatcttacaggatttgtcttattatggatgcattgaagta
gttggtgtccagcaccagattatcaaggcaatgaatcacttgacaagtcaagaaacaggt
ctgacctttgctgccaaatattacttgacaggcaagcgtgaaggtcatctgatgttgtac
aaactggaccagttccctcaaggagcaatttgtcctgtatcttttctttggaggcaaatg
aaaacaacagacaccacaacaatcactgagaatatgcaacacagagaaaatgatgaactg
atcaaggaaattgttgatagtggtaatgtaacaaacaaccacagcatggaggcaagtgat
gaaatgcctatgaaagtagatacgagtcagttgtgggtctggtgtcatcctgcgagtttc
agctcagtttttgaggcaataagtgaagcttgtaagtctgttggaagaacttcagttgaa
aaaggaagatgttttccagataaagatgacaatcctgatcaagaaactcaaagctgtaat
tttgtgaatggttttgagcacccaaagttaagggttatttctcgtcgatatgatttacta
cggttacgtctcacaggaccagaatcacatgctctgctgacaaacactctaaagttatct
tctggaacatctcaaaaacattgtgaaagtaaaagcaacaagaattcacaaaataatgca
acatttatcaaagacaagggtgatcataggaggacttcaaaatggtgggagcagatacta
aataacccaagtgattcaacagctcaaagtttattatgggagaaattaaggaaggtgtct
tcaccctcagtccttccttctgggtgtgtcattggtttgactgttcatgatccacgcctt
taccttcctggaaagaaaaaaaacatcatgcaggctactgaggataatgattctgaagat
tcagactattgtgctgaaatagcatctgcacctagtgagatgatgaacaaagtagataaa
agtacgagcaagcagccatcttttgaagatctcatggccaactggccaactgatgttgca
ggctcgcacatctgggaggaggcagtttgtcgtgaagtgaaagaaacaaaattgtctgag
caggatttgaaccgaaagagatctgcgttcctagttccaggctcccagctggacttgaaa
ccagatgagatttcccacattcctttgcttctcatacagcaaccaggaagtccaggtgac
tgtagagatggtgctggatacgggagtggctgggacattatccttccctgtggatgggct
atggcattctggatggcatttgtctacaggggtgcgagaactgggggcctccgggagagt
caaacgttagcccttgagcaaggagtgccgttctttccaaatgatttccctgacactccc
tcaggacaagcgtacaatgaaaacctgaaagcggacggcgaggcccagtacggccgatac
ccgccagcgaaaagacctaattacgacaaattaggtatcaagtcgcccttttgtccacct
tggaaagaacttgtcgaggactggagtttgtctgagcctgattctggtggtaaagcagtt
gaatccacaaagaccgttgatagaaatatcgaaagtaacaccataaaagtcgagtcgtct
tcaaacaacgtctctttttgcaagcccttttacgtgttgcgatctcgctctaaactggct
gctttgcggaactttgttttgcgcggcaaaacaaaacagaccaaaggtaaaggcctcaag
gattttgtcacaacaactaaagcgcctttgccgatgaataatgatttgtctgccatcgtg
aaagaagatgccaattctctggtatgcgtgcttgtgcggatggtcggtcgaaacgttccc
acacccaactccaccttagcgattcctttttctgaggatattacaggattcacgaaatgt
aaagacacgtccagccccgtggaacctctgcacaaaggtgtgctggctcgcacgtctggg
aagtctttgaggaacttatgcaagagagaaatcgtgggatttgtttcatccggacatttc
tccctcgcccgtggatgtgggtttggggtgggattttgtgctctaccgggtcttgtaaaa
ttgatatcttctacaagtgacagaggagaagtcatggtgttggtgaggagtccgaccact
caacaatatagatgtgctcatttaacgattttttag
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