Pocillopora damicornis (lace coral): 113673449
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Entry
113673449 CDS
T05773
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113673449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113673449
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113673449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
113673449
NCBI-ProteinID:
XP_027045670
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MSKSVAQNNQVMARLRSDSAKTKRETTRKTSSASRVCKNGKSGATAAKNSVSSKASLRSV
KREIEPAADSLQKSTKCCDKSTDEPSRNGPSHRGKRRKFSSQELSESPSKKPKVNLSEDQ
MPENVKNVDGKKRFSKAEKRKSSACLKQASNKNDVKPKATSLELKQVHVPIAKIKGKLKK
GSPVKHKHSPVPTPGDEQSSPRKHHAAASKRLKLDLKENIKEENDVEESKAKESVEDDSS
DDEEIEWEDVDEADVVDHGPEHEEASTSQEDQPPSKSSVEISITVPGTKKKKKGWSHEDV
VKYIKRAINRFRKDVYTSAHKVHILTLIAHGFFRNNICNGSLLQAILLSHVPGDFVSVNK
RKWDVVQLTNFLKWFQSEFSSTDDLRTGDKETDKQIARFQNLSEVFVTIFRALGFLTRLV
YSLQPMSAKGDVDGKTSSKTVKKNTPKGKKVSPQNSKKLSPPHVQEEAATKSKNFKSENE
SKTTPSKSVTLVSENTSDVDSKKLKKEKVTKTGTKEGGKLISGVQRTPKTSDKNSKVSKT
RKKNKDNIGNDPAKKPVKKRPLRKRAKVDYSLSDHEKEIEDDKEWSEPSSESEEEGDTNC
SEKFPKKKNKSPLARTKVSSADSCNGTPTENSSMSLINLLDDDSDFEVSSKPLVKRKLAA
DSSNKKKPVKIISSDDSDESIKCLEVFADETGINWWTEVFLPSDKKWICVHLESSSVNHP
ELCEQQATQPMVYVVSFDNDNSVKDVTNRYASSFMSKTRKLRIDSDWWEDTLLPYKSKNK
KMDKMENSLLEDQLLDKPLPTSITEYKNHPLYVLKRHLLKFEGLYPETAAILGYCRGEAV
YSRQCVHLLHTREKWLNEALVVKQGEKPYKVVKGRPKRNQPIHERDSVTIDLFGRWQTEK
YKPPPAKDGKVPRNEYGNVELFQPCMLPPGTRHIQINGIQRVAKKLGIDCAQAVIGFDFH
CGFSHPVIDGVVVCEEYEQVLLDAWHEEEEQAERKRAEKREKRMLANWKLLTRSLLIRER
LKKRYNTEETSTVETPSQEDEAATDTLVSWPLNRQEGKTSVAGEGHCHVFPESGHSQDPV
TGEWSKSCSCGLTLPFEKM
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcggtcgcccaaaataaccaagttatggcgagattgaggtcagattctgct
aaaacgaagagagaaactacgaggaaaacttcttctgcctcaagagtttgtaaaaatggt
aaatctggagcgacagcggcgaagaactctgtatcttcaaaagcaagcttgcgatcagtc
aagcgcgaaatagaaccggctgccgattctttacagaaatcaactaagtgctgtgacaaa
tcgacggatgaaccctccagaaacgggccctctcacagaggcaagaggagaaagttctca
tcccaggagcttagtgaatctccctcaaaaaaacctaaagtgaatttatctgaagaccaa
atgccagagaatgtgaaaaatgtagatggcaagaaaagattttccaaggcagagaaacgt
aaatcatctgcatgtttgaaacaagcctctaataagaatgatgtgaaaccaaaggccacc
tcccttgagttgaaacaggtgcatgtacctatcgcaaagataaaagggaagctgaaaaaa
ggaagtccagtgaaacataaacattcacctgtacctactcctggagatgaacagagttca
cctagaaaacaccatgcagctgcaagcaaaaggttgaaactagatttgaaagaaaatatc
aaagaagagaatgatgttgaggaaagtaaagcaaaagaatctgtggaagatgattctagt
gatgatgaggagatagagtgggaagatgttgatgaggctgatgttgtggatcatggacct
gaacacgaggaagcttcaacctcacaggaggatcagccacccagcaaaagcagtgttgag
atcagtatcacagtaccgggaacaaaaaagaaaaaaaaaggatggagtcatgaagatgtt
gttaaatacattaaaagagcaattaacagatttaggaaagatgtttacaccagtgcccac
aaggttcacattttgactcttattgcacatggattctttagaaacaacatttgtaatggg
tccctgctacaggctattctgctatcccatgttccaggggactttgtttctgtgaacaag
aggaaatgggacgtggtgcaacttacaaacttcttgaaatggtttcaaagtgagttctcc
agcactgatgatttaagaactggagacaaagagacagacaaacagattgccagatttcaa
aacttatctgaggtatttgtgacaatcttcagagcacttggatttctgacaaggcttgtg
tattcccttcagcccatgtcagctaaaggtgacgtagatggtaaaacaagctctaaaact
gtgaagaagaatactcccaaggggaaaaaagtatctcctcaaaattcaaaaaaattatca
ccgccacatgttcaggaggaagctgctacaaagtcaaagaatttcaaatcagaaaatgaa
tccaagacaactccatctaaatctgtgacactcgtttctgaaaatacaagtgatgttgac
agtaagaaattaaaaaaggagaaggtaactaaaactggtacaaaggaaggaggtaaattg
attagcggtgttcaaagaactcctaagacttctgataagaatagcaaagtcagcaagact
aggaaaaagaacaaggataacattggtaatgaccctgcaaaaaaaccggtgaagaagaga
cctttacgcaagagagccaaggtagattactcactcagtgaccatgagaaggaaattgag
gatgacaaagaatggagtgaaccatctagtgaaagtgaagaggagggagacacaaactgc
tcagaaaaattcccaaagaagaaaaacaagtctcctctggccaggacaaaagtgtcctcg
gcagatagttgtaatggtacaccaactgagaacagtagcatgtcattaattaatcttttg
gatgatgatagtgattttgaagtttcaagcaaaccattggttaaaagaaaactggctgct
gattcatcaaataaaaagaagcctgtgaagattatcagctctgatgattctgatgaaagt
atcaagtgtttggaagtttttgctgatgaaacaggtatcaattggtggactgaggtgttt
ttgccttctgacaagaaatggatttgtgttcatcttgaatcttctagtgtcaatcatcct
gaactgtgtgaacaacaggcaacccaacctatggtatatgttgtgtcatttgataatgat
aattctgtcaaagacgtcacaaataggtatgcctcttccttcatgtctaagaccaggaag
cttcgcattgattctgattggtgggaagatacacttcttccatacaagtcaaaaaataag
aaaatggataagatggaaaattctcttcttgaggatcaacttcttgacaaacctctgccc
accagcataacggagtacaaaaaccatcctctttacgtgttgaagagacatctccttaaa
tttgaaggcttgtacccagaaactgcagccattttgggttattgccgcggtgaagcagtc
tactcaagacaatgtgttcatttgctccacacaagagagaagtggttgaatgaggctttg
gttgtgaagcaaggcgagaaaccttacaaggttgtaaaaggacggcctaaaaggaatcaa
ccaatccatgagcgagattcagttacaattgacttgtttggcagatggcaaacagagaaa
tataaacctccgccagcgaaagatggaaaagtaccaaggaatgaatatggtaacgtagag
ttattccaaccttgtatgctgccaccaggaacgaggcacattcaaataaacggcatccaa
cgggtggctaagaaactcggcattgattgcgctcaggctgtgattggatttgattttcac
tgtggttttagccatcctgttattgatggtgttgtggtgtgtgaggaatatgaacaggtg
ttattggatgcgtggcatgaagaagaggaacaagcagagaggaaaagagcagagaagcgc
gaaaaacgtatgctggcgaactggaagcttttgacgaggtcactgttaatccgtgaaaga
ctgaagaaaagatacaacacagaggagacaagcacagttgagacaccaagccaagaggac
gaggctgccaccgacaccttagtttcatggcctctaaacagacaagagggcaaaacgagt
gttgctggtgagggacattgccatgtatttcctgagagtggacactcacaggatcctgtt
accggagaatggagtaaatcatgttcgtgtggattaactcttccgttcgaaaaaatgtag
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