Pocillopora damicornis (lace coral): 113673908
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Entry
113673908 CDS
T05773
Name
(RefSeq) circadian locomoter output cycles protein kaput-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113673908
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113673908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
113673908
NCBI-ProteinID:
XP_027046178
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MFNSKNSPTAKDVDIGLMQLRILEPNEKETQKPSKKKMAPGTSRRRKKSRYKRSKSTDNS
RVVELRKERSRDAARSRRGKENAQFDELAKLLPLPPAITSQLDKASIVRLTISYLNMKQF
GKRGKRFRLGSECSQMSVSSASPMSDLDGELHTESPSPPSSISSPPAVASTSTGSVVPYS
SGINYSDLAANSGIFLLQALDGFLFVLSSDAKVLYVSETVSVHLGLSQVELTGSSMFGYI
HPEDQQDLVNVLQNAKEELESNGNCTPSSSGRYTDDIPFFGNQPGFLDDSGRPNAEKPKS
FFLRMKCTLVRRGGSYTKSSGFKVIHCMGRMKAYSAGGLPGPKYAFVAIGQPLPTMNINE
LPLECNMFVSRVNMDLRIVYCEGRIHKFMDYFARDIVGISAYDFYHGNDIAIIQSHHAKF
LTKGQVLTKYYRWMNKNGGWVWMQTKASLIPHPTNPELKQMLCLNYIVSDVEHRGVVLGM
AQLEDKPPLTHAYITEVENESDTTGELKDAQYDDQVMIYPKWHETSDNLVPKPTLIDTIA
LDRTGYPKTTSADLTGFDNEVFTTSAEPWGQGTSNTWSNHHTMSRGNSIPGDGGSTSTLE
EDVEDWAKMIRAELSELDQNIVNYVATGTDIPQPDASLESLLLNRGLDGLPSNGTIQHLV
TPKIEEITMDSDDFSLSSVPGVNTQTMPPVSMPSRSFENLPIDDFARDTKPNLIPMELEG
AMSAVSGSKPRGSNNPCRFGNANSSGERRFQPKAPPAFSHPNNATPSSTPMMNVTSQTQS
IPTARAPNTITTTQGRNTTGRVPQPPRDDLALTGSATFRVPTDASRFSNPNDGKMQFFQQ
LKEVAPQELNITDQMMVDLIDELMADRDQSRDNRLAALVQQGGYAQVEQMAVIKQEVVTP
TLPEPSSSFPSFSDSIATQSSQPRVVNSSLPYTSSDTLSRLPGGQNTLVTQPRAPQNGTV
HNQALPMRYQNGNSHTQLVNQGDNNMNFLNCLPNESVTSTQTGTSTTSNNMWNTNSGFKP
NPMQQGIRNLLQSNNSAPPMQTTNVNSQLNVGVFPQQPDMTFLSQQNVNSMMPENGTRNV
LSNSVITPLDLQELSSLIQSATHPAQNYPNSNGGSIPQHYHKL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcgaaaaactctcccacagcaaaagacgtggatattgggctgatgcagcta
agaatccttgaacctaacgaaaaggaaacgcagaagccctcgaagaagaaaatggctcct
ggaacctcaaggcgccggaagaaatctagatacaagagatcgaaaagcacggacaactcg
agagttgttgagcttcgtaaagagagatctcgagatgctgcaaggagcagacgcggaaag
gaaaatgctcagtttgatgagctggccaagctcctgccactaccccctgccatcacatcg
caactggataaagcttccattgttcgtcttacaatcagttacttgaacatgaagcagttt
ggcaagagagggaaacgttttcgcctgggttcagaatgctcacagatgtctgtgtcatct
gcatcacccatgtcagatttggatggagaacttcatacagagagtccatctccaccctcc
tccatttcttctccaccagctgttgctagtacctctacaggttcagttgtgccgtacagc
tcaggcatcaattacagtgatcttgctgcaaacagtggtatatttttgttgcaggcattg
gatggattcctgtttgttctttccagcgatgcaaaagtcctctatgtttcagagactgtg
tctgttcatcttggactgtcacaggttgaactgacaggaagcagcatgtttggctacatt
cacccagaggatcaacaggatcttgtcaatgtgttgcaaaatgcaaaggaagaattggaa
agcaatggaaactgtacgccgtcatcatcagggagatacacagatgatattcctttcttt
ggaaaccagccaggttttcttgatgatagtggacggcccaatgcagagaaaccaaaatca
ttcttcttgcgaatgaagtgcactctggtccgcagaggaggttcttacaccaaatcatct
ggtttcaaggttattcactgcatgggaagaatgaaagcatattctgccggtggccttcct
gggcccaagtatgcatttgtggcaattggacaaccactgcctacaatgaacatcaatgag
ttaccactggagtgtaacatgtttgtgagcagagtaaacatggatctcagaattgtttac
tgtgagggaagaattcacaagtttatggactattttgcccgagatattgtggggatatca
gcatatgatttctaccatggcaatgatattgctattatccagtcacaccacgcaaaattc
ctaacaaaaggtcaagttcttaccaagtactatcgctggatgaacaaaaatggcggctgg
gtttggatgcaaaccaaagcttctcttattccccatccaacaaacccagaactcaaacaa
atgctctgtctgaactacattgtgagtgatgtggaacaccgcggtgttgtgcttggaatg
gcgcagttggaggacaaaccacctctcactcatgcttatatcactgaagtggaaaatgag
tcagatacgactggcgagctgaaagatgcacaatacgacgatcaagtcatgatttatcca
aagtggcatgaaacatctgacaatcttgttccaaaacccacattgattgacaccatcgcc
ctcgaccggacgggttatcccaaaaccacgtcagctgatctcactgggtttgataatgaa
gtattcaccacctcagctgaaccatggggtcaaggtacctccaacacctggagtaaccac
cacacaatgtctaggggcaacagtattcccggagatggggggtcgactagtaccttggaa
gaagacgtcgaagactgggccaaaatgatccgagctgagctgtcagagttagatcaaaac
atcgttaattacgtggcaactggaactgatatccctcagccggacgcaagccttgaatct
ttactactgaatcgtggcctggacggattgccgtctaatggtacgatccaacatttggtc
acaccaaagattgaagaaattacaatggatagtgatgatttttcgctgtcctcagtacct
ggtgtaaacactcagactatgcctcctgtcagtatgccatcacgatcgtttgaaaacttg
cctatagatgatttcgcccgtgacaccaaacctaacttaattcccatggagcttgaaggt
gccatgagtgcagtgagtgggtcaaagcctcgcggcagcaacaacccttgcagatttggc
aatgcaaattcttctggggagaggagattccaacctaaggcgccgcccgcatttagtcat
ccgaacaatgctactccttcgagtactcctatgatgaatgtaacatcacaaacgcaaagt
atccccactgcaagagctccaaacaccatcacgacaacgcagggaagaaatactacagga
agggttccacaacctccaagagacgacctggcactaacaggcagcgcaacgtttagagtt
ccaactgacgcttcacgattttcaaatccaaatgatggaaagatgcagttcttccaacaa
ctaaaagaagtagctcctcaagaattgaacatcacggaccaaatgatggttgatctcatc
gatgaactgatggccgatagagaccaaagtagagacaacaggttagcagcacttgtacag
caaggaggctatgcccaggtggagcagatggctgtgatcaaacaagaagtggtaactccc
acgttaccagaaccatcaagttcatttccaagtttttcggacagcatcgcaacacagagt
agtcaacctcgtgttgttaacagttctttaccttacacatcttcagacactctcagccgg
cttccaggaggtcagaatacattagttactcagccaagagctccacaaaatggaactgtt
cacaaccaagccctcccgatgagatatcaaaacggaaattctcatactcagcttgtaaac
cagggggataacaacatgaactttttgaactgtttaccaaatgaaagtgtgaccagcacg
caaactggaacatcgacaacgagtaacaacatgtggaacaccaactctggttttaagccg
aatcctatgcaacaaggaatacgaaacttgttacaaagcaacaacagtgcaccgcccatg
caaaccacaaacgtgaattcgcagctaaatgttggcgtatttcctcagcagcccgacatg
actttcttgtcgcagcagaatgtgaacagcatgatgcctgagaacggcactagaaatgta
ctaagtaacagtgtgataactccgttggacctgcaagagttgagctctctgatccagtcc
gccacccatccagctcagaattatccgaacagcaatggtggctccataccacagcattat
cataaattatga
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integrated database retrieval system
