Pocillopora damicornis (lace coral): 113673921
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Entry
113673921 CDS
T05773
Name
(RefSeq) LOW QUALITY PROTEIN: carbamoyl-phosphate synthase [ammonia], mitochondrial-like
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam00220
Arginine biosynthesis
pdam00250
Alanine, aspartate and glutamate metabolism
pdam00910
Nitrogen metabolism
pdam01100
Metabolic pathways
pdam01200
Carbon metabolism
pdam01230
Biosynthesis of amino acids
Module
pdam_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
113673921
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
113673921
00220 Arginine biosynthesis
113673921
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdam01002
]
113673921
Enzymes [BR:
pdam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
113673921
Peptidases and inhibitors [BR:
pdam01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
113673921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
Dala_Dala_lig_C
MGS
CPSase_L_D3
ATP-grasp
ATPgrasp_Ter
Peptidase_C26
ATP-grasp_3
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-GeneID:
113673921
NCBI-ProteinID:
XP_027046190
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSMILRASSLLRRGKTAFSAAKLSSVSTRSRKSLSASLVLEDGTRLKGYSFGHGKSTSGE
VVFNTGLTGYPEALTDPSYRGQILTLTYPIVGNYGVPSTTERDKYGLLKHVESENIQVSG
LLVQDYSHNYSHWNAVKSLSEWLQEEKIPALYGVDTRMLTKIIRDKGTILGKIEFEDQPV
EFVDPNKRNLTAEVSVQEKQIFGEGNPYKVIVVDCGIKQNMIRHLVMRDAEVHLVPWNYD
YSEDIYDGLFISNGPGDPAMVWDAVLNLRKVLKNERNQPIFGICMGNQLTGLAAGAQTYK
LPLGNRGHNQPVINQLNGQAFITSQNHGYAIDEKTLPSDWKSLFINANDNTNEGIMHKDK
PIFTAQFHPEAFGGPTDTEFLFDTFMNLVKGGKTSVDHAMGRPFKVPTPPKVSKVLVLGS
GGLSIGQAGEFDYSGSQAIKALKEENMKTVLMNPNIASVQTNAEGEKQADVVYFVPITEQ
FVEDVIRRERPDGILLSMGGQTALNCGVELYDKGVLKRYGVEVLGTPIESVKATEDRQIF
SDKLTEIGEKIAPSVAVETEESAVKAAKNIGFPVMVRAAYALGGLGSGLCENEEKLREVA
RQALKLSNQILIEKSLLGWKEIEYEVVRDAADNCITVCNMENFDPLGVHTGDSVVVAPSQ
TLSNEEYHMLRETALKVVRHLGIIGECNIQYALHPKSLEYCIIEVNARLSRSSALASKAT
GYPLAFIAAKLALGIQLPDIKNSTTEQTTACFEPSLDYIVTKIPRWDLDRFHMTSKQIGS
SMKSVGEVMAIGRTFEESFQKALRMVHPSVDGFVSKLPSMHQELTDGKLEDELVVPSNTR
VYSIAKALHQNYTVDQIHELTSIDHWFLHKLDRIVEIEKDLKNQQLETVSTDYDECDRLY
FEELSLERVLDIYQQEVCNGAVISVGGQIPNNLALPLYMNGVNVLGTSPLMIDAAEERSR
FSATLDEIGVGQAPWRAVSSVDDALNFAATVGYPCLLRPSYVLSGSAMNVAYGPVELKKF
LQEAARVSQDHPVVMTKFIEGAREIEMDAVAKNGKVVAHAISEHVENAGVHSGDATLILP
PQTISEEDIAQVKEATRKIAEKFNISGPFNTQFLAKDNEIMVIECNLRASRSFPFVSKTV
GTDFITVATKIMVNHPLDEHALPDLTTPLQPVGYVGIKVWMFTXFXRVCAIKKLKIMLFR
NTFTFDDLQVACFGSTANSAFLKALMSTGFRLPKKGILIGIQQSLQPKFLPTANKLRQLG
FTLYATEATAQYLNEHNIPAQPVEWPLHSVGVNPTATRLIQDKDVDLVVNLPNQNTKYIK
DNYLIRRSSIDCGVPLITNLEVVKMFAEALSETGRKIDAT
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatacttcgagcttcgagtttactgcgaagagggaaaactgcgttttcagcc
gctaagctatcgtctgtttcgacaagatcacgaaagagtttgtcggcatcattggtttta
gaggatggaactcgccttaaaggatattcctttggtcatggcaaatctacatctggagaa
gtggtctttaataccggtctgactggataccctgaagcactcacagatccaagttacaga
ggacaaatactgaccctgacttatcctatagtgggaaattatggtgtgccgagcacaaca
gagagagataaatatggattattaaaacatgtggaatcagaaaacatacaggtgtctgga
ttgcttgttcaggattattctcataattacagtcactggaatgcagtgaagtcactttca
gaatggttgcaagaagaaaagattccagccttgtatggagtagatacaagaatgttgacc
aaaatcataagagacaaggggaccatccttggtaaaatagaatttgaagatcagcctgta
gaatttgttgatcctaataagaggaatttgacagctgaagtttctgtccaggaaaaacaa
atttttggtgaaggaaatccatacaaagtcatagttgttgactgtggtataaaacagaac
atgatccggcacttagttatgagagatgcagaagttcacttggtgccttggaattatgat
tactcagaggatatctatgatggtttatttatttccaatgggcccggtgaccctgccatg
gtatgggatgctgttctgaatctgcgcaaggtgttgaagaatgagcgtaaccagccaata
tttggtatctgcatggggaatcaacttaccggtctggcagctggtgcacagacttacaag
ctgccacttggaaacagaggacacaatcagccagtgattaaccaactcaatggacaagca
tttataacctcccagaatcatggatatgccattgatgagaagactcttccttcagattgg
aaatcactgtttattaatgccaatgacaacacaaatgagggcatcatgcacaaggacaaa
cctatcttcactgcacagtttcatccggaggcatttggtggaccaacagacacagagttt
ctgtttgacacattcatgaatcttgtaaaaggtgggaaaacatcagtggaccatgcaatg
gggagaccatttaaagttccaacacctcctaaggtgtcaaaagtgttagtcttaggttct
ggtggtttgtccatcggtcaagctggagagtttgactattccggatctcaagcaataaag
gcgttgaaggaagaaaatatgaagactgttctgatgaatcctaacattgcctcagttcaa
actaatgcagaaggagagaaacaggcagatgtggtgtactttgtgcccataactgaacag
tttgttgaagatgtcataaggcgtgaaagaccagatggaattttattgtcgatgggcggt
caaacagccttaaactgcggagttgagctgtatgacaagggagtattgaagagatatggt
gttgaggtgcttggaacaccgatagagtcagtcaaagccacagaagacagacaaattttt
tcagacaaactcacagagattggagagaagatagcacctagcgtcgcagtggaaacggaa
gagtcggctgtaaaggctgccaagaacattggttttccagtaatggttcgagccgcgtat
gctcttggaggactgggatccggcttgtgtgaaaatgaagagaaactgagagaagtcgca
agacaggcactcaagctatcaaatcagattctgattgagaaatctttgttgggttggaaa
gaaattgagtatgaagtcgtcagggatgccgctgataattgcatcactgtatgtaacatg
gagaattttgatcctttaggagttcacacaggtgactctgtggttgtggcaccaagtcaa
actctgtcaaatgaggaatatcacatgctgcgggaaacagcacttaaggttgtacgccat
cttggtattattggtgaatgtaacatacagtatgctctgcacccaaagtctctggagtac
tgtataattgaagtcaatgcccgtttgtccagaagctctgccctcgcatcaaaagctacc
ggatatcctctggcattcatcgcagccaagctcgcacttggaatacaacttcctgacatc
aagaactctacaacagagcaaacaacggcctgttttgagccaagcctcgattacattgtc
accaagattcctagatgggacttggacagatttcatatgacttccaaacagatcgggagc
tcgatgaaaagtgttggagaggttatggcgatcggtcgaacatttgaggagagctttcag
aaagctttgcgtatggtgcatccctcagtggatggctttgtgtccaagcttcccagtatg
catcaggagttgacagacggcaaacttgaagatgagctagttgttccatcaaacacaaga
gtatactccatcgctaaggcgcttcaccagaactatacagtggatcaaatacacgaactg
acaagcattgatcactggttcttgcacaaattggatcgtattgtggaaatagagaaagat
ctaaagaatcagcaactagagactgtcagcacagattatgatgaatgtgatcgcctttac
tttgaggaactttccctcgaaagagtcttagacatttaccagcaggaggtttgtaatggt
gctgtgatctcagttggtggacaaatccccaataacctagcgctccctctgtacatgaat
ggtgttaatgtccttggtacctctcccctgatgatagacgcggctgaagaaagatctcgc
ttctctgcaactcttgacgagattggagttggccaagcgccttggagagccgtttcttcc
gtggatgacgcgttgaattttgctgccaccgttgggtacccatgtcttctcagaccttct
tacgtcttgagtggctcagccatgaacgtagcttacggtccagttgaactgaaaaagttt
ttacaagaggctgccagggtgtcacaggaccatcctgttgtgatgacgaaattcatcgag
ggcgctcgggaaatcgaaatggatgctgtagctaagaatggaaaggtcgtcgcccatgct
atttctgagcacgtggaaaatgctggcgtccattcaggggatgccaccctcatcttgcct
ccacagacaatcagtgaagaagacatcgcccaggtaaaagaagcaaccaggaagattgct
gaaaagttcaacatttcgggtccgttcaacacgcagtttttagccaaagataatgaaatc
atggtgattgagtgcaatctacgtgcttctcgttcctttcctttcgtatccaaaacagtc
ggcacagactttatcactgtggctacaaagataatggtgaaccatcctcttgatgagcac
gcgttacctgatctgaccacgcccttgcagccagtcggatatgttggcatcaaggtttgg
atgtttacgtgattttaacgtgtttgtgccataaagaaattgaaaataatgctgtttcgt
aatacgtttacatttgacgatttacaggtggcttgctttggatccactgccaattcagcg
tttctcaaggctttgatgtcaactggcttccgtctgcctaagaaaggcattctgattggt
attcagcaatccttgcagccaaagtttctcccaacagccaacaaacttcgccaactggga
ttcactctatacgcaacagaagctacggcgcagtatttgaacgaacacaatattccggcg
caacccgtagagtggcctctacacagcgttggtgtaaacccgactgctacaagactgatt
caagataaagatgtagacctggtggtgaatttgccaaatcagaacaccaagtacatcaaa
gataactacctcatccgtagatcgtccatcgactgtggagtcccactcataactaacttg
gaggtcgtgaagatgtttgccgaagctctttcagaaaccggccgcaaaatcgatgccaca
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