Pocillopora damicornis (lace coral): 113674078
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Entry
113674078 CDS
T05773
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113674078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113674078
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113674078
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113674078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
113674078
NCBI-ProteinID:
XP_027046346
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MSMVSVHENIVVIPGERLGSIEQYSPGNGTYIRHGYVYASLAGYKQSQNQEDGEKPIIHI
IREEEKYVVPEVGSVVTCKVMSTNPRFCKVAILGVETTSLKEPFKGTIRKEDVRATEKDK
VEMYKSFRPGDIVLARVLTLHTQTYLLSTAENELGVIFAKSEGGAAMVPISWCEMQCPKT
RAKEHRKVAKVQQAS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggtgtcggttcatgaaaatattgtggtgatacctggggaaagattaggaagt
attgaacaatattcaccaggaaatggaacttatattcgccatggatatgtgtatgcaagt
cttgctggttacaaacagtcgcaaaaccaggaggatggagagaaacctatcatacatatc
atcagagaggaggaaaagtatgtagtgccagaagttggttcagttgttacatgcaaggtg
atgagcacaaacccaaggttttgcaaagtagcaattcttggtgtagaaacaacttcttta
aaggaacctttcaaaggaacaatcagaaaagaagatgtccgggcaactgagaaggacaaa
gttgaaatgtataagtctttccgccctggtgatatagtactggccagagtactaactctt
catacacaaacgtatctcctttcaacagctgaaaatgaacttggagtcatttttgccaag
agtgagggtggtgctgcaatggtgccaatcagttggtgtgagatgcaatgccccaaaaca
agagcaaaggaacaccgaaaggttgccaaggttcagcaggcatcttga
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