Pocillopora damicornis (lace coral): 113674106
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Entry
113674106 CDS
T05773
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113674106
03036 Chromosome and associated proteins [BR:
pdam03036
]
113674106
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113674106
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113674106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
113674106
NCBI-ProteinID:
XP_027046382
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MPDEERVRKKRRKLDSIISKLHQTNPSEKEGTGREEKQNDAKKENVDANETGESLPRSSR
RKAAAAAVKQKHHDKEPVTCQEGEVDEEAHGIENGMDIDEEQKVPCIEEDCVIEEVPPDN
DPVVKQEPVENYENSLDGLQKMLGYDISEEVQKQKEQGGEKKKEKQISENSDADVELPRR
VQCTACGRQVNPAHGTVCRHPNLNVLVCKKCSRYFNSGPFTRDEFGVEEQCRWCGDGGSL
LCCDKCEKAFCKTCIKRNLGKAKLKEIVDAPEDTEWLCFCCNSKPLSQLVKACNRIMDIL
DSRKAQKSLFKSKKGSSLKETPNQKERRSRLCSISENMGMSSDGALSPSESPTKKSAAAN
RVSVNDDDCKDDEDDGGNDSDRKKDRKCSSKVANKKNGKKNGSTKEDVLVVVDSDSDDDV
VVTSSRSKGNNKKVQAKSTSKNKPQMSGESVGKNNKKDNKKSKVKNSRTRKDSSSESDSH
EKNKDLKRKSKAVKKTKRKDKSEEEDSDFSDFVSMVKTKDDHQKEKKVKKQKGKGKKQAI
SDSGKESEDERDNERRKTRSKKASVSQKQTRKRPRRVTSSEEESSSSDEEKSDSDVPAKK
RKKQQAKKNRKIQRIASEDSDESDEEIASKKKGKSRKKTKSSSSESDDDSKKKRKRKGKG
KEKKGRKKHQIGKDNDDSENNEDEEEEEEEVSPSKKKGRKKIRKLIEDEKLAEETRKARR
LEEERRKRLLERTRASELDDLPSESTKVSTLVLEADPDTKEPLVQIKEDLLQHLKPHQSK
GIQFMYDCVIESLKSWKKEEPGGGCILAHCMGLGKTLQVVALVHTLMTHSDIKLQRVLVV
APLNTVLNWQVEFEKWLAVDDRLEVYILQEVGGNNWRRADMLTHWMRYGGVLIMGYSLYR
NLSQCYRIRSKHQKKLFQEALVDPGPDLVVCDEGHILRNDASAISKALNAIKTKRRIVLT
GTPLQNNLIEYHCMVSFVKPNLLGTRKEFTNTFVNPIQNGQCADSTALDVQIMKQRCHVL
HKMLEGCVQRKDYAALIPFLPRKHEYVIKVRLSASQRKLYEHYLKTFVFPDGDVGKRGVS
LFSDYQCLMRIWTHPWCLKLDALRRPEQFVDTDSMDDFVVHTDEEEEEEEGSESVQSTTS
EEGEDEVQSSSESEDERKRVKGRRRKKYSSSDEEESDDDENESEDEVLPQSSRKKSALAS
KASSASNRAGSSTVNIGGEDITVVDINEGASTSRVGPNSSNNDTRNSKKDVSVRDDASPS
TSKDIQNSETSSSVFGSTRSGASFKDEPDVEIEEEKEWYDEFLQEDDEYNVELSGKLVLL
MEILADAEAVNDKVLVFSQSLVTLDLIEKMLGGGEIGGDRENWCRGCDYFRMDGSTSAAM
RQRWADIFNDDDNKTARLFLISTKAGGLGINLVAANRVVVFDVSWNPSHDVQSIFRVYRF
GQSKAVFVYRLIAQGTMEEKIYDRQVTKLSLSSRVVDEQQIERHFTAADLRELYTFTPDV
LDEDKEAEKEKEKDAGEKSKEKEEGANVTNEEKENDKGDETEKEGDRVNETERENGEKQE
KDEEDLRNGGKDSASEQAKGSDKPEERPSLPLPKDAVLADLIARLHPRWIVKYHEHDSML
QNIESEELTPEEMKQAWEAYEAERSGQIVPAHNRNQEPPPGSHAHTQMQVAQRIRINSDM
LKQMQQIQQLQEMQQRQEMQERMQRVRQEQERLYQQRHSALYQQHQRQQDEIRRQNELRF
IQHMTQQPAAQRFQIGQNTVNVQTTLPPAPQAPQVSFARPGLTYQPLRVGFQVPANVRLA
APGAGTIPTTGTPSTITLTLGPATQVSTVRTLSNNAQVSRP
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgaggaaagagtgaggaaaaaacgacgaaagctcgattccataatcagtaaa
ctgcatcagacgaatccatcggaaaaagagggcacaggaagggaagaaaagcagaatgat
gcaaagaaagaaaatgttgatgctaatgaaacaggagaatcacttccaaggtcatcaaga
aggaaagcagctgcagcagcagtaaaacaaaagcaccatgacaaggaaccagtcacttgc
caagaaggagaggtagatgaagaagctcatggcatcgaaaatggcatggatattgatgag
gaacagaaagttccttgtattgaagaagattgtgttattgaagaggtaccacctgataat
gatccagtggtaaaacaagaacctgttgaaaactatgagaactccttagatggtcttcag
aaaatgctggggtatgatattagcgaagaggtacagaagcagaaggaacaggggggtgag
aagaaaaaggagaagcagatttctgaaaattcagatgctgatgttgagttaccccgaaga
gttcagtgtacagcttgcggaagacaagtgaaccctgctcatggtactgtctgtagacac
ccaaacttgaatgtcttggtgtgtaaaaaatgcagtcggtacttcaattctgggccgttt
actcgtgacgaatttggtgtagaggaacagtgtcgatggtgtggtgatggaggttcgctt
ctctgctgtgacaagtgcgagaaggcattttgcaaaacttgtattaaacgtaaccttggc
aaggcaaagctcaaagagatcgtggatgcaccggaagacactgaatggttatgcttttgt
tgtaattctaaacctttatcgcagctagtaaaagcatgtaatcgaattatggacattctg
gattcgcgcaaagcccaaaaaagtctctttaaatcgaaaaagggatcttcgttaaaggag
acccctaaccaaaaggaacgacggagcagactgtgcagtataagtgagaatatgggaatg
agctctgatggcgcattgtcacccagtgaaagtccaacaaagaagagtgcggctgctaat
cgcgtcagtgtcaatgatgatgattgtaaagatgacgaggacgatggtggaaatgattcg
gatcgaaagaaagacagaaaatgcagctctaaagttgcaaacaagaaaaatggaaagaaa
aatgggtctactaaagaggatgttttggtggttgttgacagcgatagtgatgatgatgtg
gtggtcaccagctctaggagtaaagggaacaacaaaaaggttcaggcgaagagtacaagt
aaaaacaaaccacaaatgagtggcgaatcagttgggaaaaataacaaaaaagacaataag
aaaagcaaagtgaaaaacagtagaactagaaaagattcatcaagtgaatcagattctcat
gagaaaaacaaagatttaaagcgaaagtcgaaagctgtaaaaaagacgaagcgcaaagat
aaaagtgaagaggaagattcagacttttcagactttgtttctatggtgaaaactaaagac
gatcatcaaaaggagaagaaggttaagaagcagaaaggaaaaggaaagaaacaagccatt
tcagattcagggaaagaatctgaggacgagagagacaatgaaagaagaaagacacgctct
aaaaaggcaagcgtgtcacaaaaacaaactagaaaacgcccgcggagggtaacttcttca
gaggaggagtccagttcctccgatgaggagaaatctgacagtgatgtgccagctaaaaag
aggaaaaaacagcaggctaaaaagaacagaaagatacagaggatagcttcagaagacagt
gatgaatctgatgaagagattgccagcaaaaagaagggcaaatcaaggaagaaaactaaa
agtagtagttctgaatctgacgacgatagtaagaagaaaagaaaacggaagggaaaaggg
aaagagaaaaaaggacgaaagaaacaccaaattggtaaggataatgacgactcggaaaat
aatgaagacgaagaagaagaagaggaggaggtgagcccatcgaaaaagaaaggtcgtaag
aaaattcggaaactaattgaagacgagaaacttgccgaagaaacccgaaaggccagaagg
ctcgaggaagagaggcggaaacgccttttagaaaggactcgtgccagtgaacttgatgac
ttgccaagtgagtcgaccaaagtctccacacttgttcttgaggctgacccagacaccaag
gagccgttagtccagattaaagaggatcttctgcagcatctgaaacctcatcaaagcaaa
gggatacagttcatgtatgactgtgttattgagtcgttaaagtcatggaagaaagaagag
ccaggtggaggctgtatactggcccactgtatgggtctcggcaaaacgctgcaggtcgtt
gcacttgtccatacactgatgacccattcagatatcaagttacaaagggtgttagttgtg
gctcctctcaacacagtgttgaactggcaagtcgagtttgaaaagtggctagctgtggat
gacaggctcgaggtttatatccttcaggaagttggaggaaacaattggcgtcgagcagac
atgctcacacattggatgcggtatggtggtgtgctgatcatgggatactcgctctaccgt
aacctgtcacaatgctacaggattagaagcaaacaccagaagaagttattccaggaagct
ctggttgatcctggtcctgatttggtagtttgtgatgaaggtcatatcttgcggaatgac
gccagtgccatctccaaagctctcaatgccataaagacaaaacgacgaattgtgttgact
ggaacacctctgcagaataatctcattgaatatcactgtatggtgagttttgtgaaacca
aatctccttggtacgcgtaaagaatttacgaacacgtttgtcaatcccatccaaaacggc
cagtgtgcagattctacagctcttgatgttcagattatgaaacaacgatgccatgtgctt
cataagatgttagaaggctgtgtgcagagaaaagattacgcggcgctgataccttttctt
ccacgtaaacatgagtatgtgatcaaggttcggttatcagcatcccagaggaagctgtat
gaacattacctcaagacatttgtgtttcctgatggggacgttggaaaaagaggggtttcc
cttttctcggactatcagtgtctgatgcgtatttggactcatccctggtgcctgaagctg
gatgctctgcgacggccagaacagtttgtcgatacagacagtatggacgactttgtggta
cacactgacgaagaagaagaagaagaggaaggatcagaaagcgttcagtcaacaacttca
gaggaaggagaagacgaagttcagtcttcatctgagagtgaagatgaaagaaaacgagtt
aagggcaggagaagaaagaagtattcaagctcagacgaggaggaaagtgatgacgatgaa
aacgaaagcgaggatgaagttcttccgcagtcctcaaggaagaaatctgcgctcgccagc
aaagcttcttcagcttcaaacagggctggctcctctactgtgaacattggtggagaggac
ataacagtagtggatatcaacgaaggtgcgagtaccagtcgtgttggacctaattctagt
aacaacgatactcgcaacagcaagaaagatgtttcagtgagagacgatgcgtcaccgtca
acaagtaaagacatacaaaatagcgagacgagcagcagtgtttttggcagcacacggtcg
ggggcgtctttcaaagacgagccggacgtggagatcgaggaggaaaaggaatggtacgat
gaattcctacaggaagatgacgaatacaacgtggaacttagcggcaagcttgttcttctg
atggagatccttgctgatgcagaggcggtgaatgataaagtactagtcttcagtcagagc
ctggttacccttgatttgatagagaagatgcttggcggtggagaaatcggtggcgataga
gagaactggtgtcgaggttgtgactattttcgaatggatggatccacaagtgcggctatg
agacagcgctgggctgatatttttaacgatgatgataacaaaacggctcgcttgtttctt
atctcgaccaaggctggtggactgggaatcaatctagtggcagccaaccgagttgtggta
tttgacgtgtcatggaatccctcacacgatgtacagtcaatcttcagggtttaccggttt
ggacagagcaaggctgtgtttgtttacagacttatagcacagggaacgatggaggagaag
atatacgatagacaggtgacaaagttatctttgtccagccgagtggtggatgaacaacaa
attgagcggcactttactgctgctgatctacgcgagctgtacacgtttaccccggatgtt
cttgacgaggataaggaggcggagaaggagaaagagaaggatgccggcgagaaaagcaaa
gaaaaggaagaaggagctaatgtgactaatgaggaaaaggaaaatgataaaggcgatgag
acagaaaaggagggcgatagagtcaatgaaactgagagagaaaatggagagaagcaagaa
aaggacgaggaagacttaaggaatggaggaaaagacagtgcaagcgagcaagcaaaagga
agcgataaacccgaagagcgaccttccttgcctctcccaaaggacgctgtactagcagat
ttgatcgcacgccttcatcccagatggatagtgaagtaccatgagcatgactccatgcta
cagaacatcgagtctgaagaactgactccggaagaaatgaagcaggcatgggaagcttac
gaagccgagagatctggccaaatagtcccagcacacaaccgcaatcaggagcctccaccg
gggagccacgcccacactcagatgcaagtggcgcagagaatccgaataaactcggatatg
ttgaagcagatgcagcagattcaacagctgcaggagatgcagcaacgtcaggagatgcag
gagcgcatgcaacgtgtacggcaagagcaggaacggttgtaccagcagcgccacagcgct
ttgtatcaacagcaccagcgacagcaggacgagatacgccggcagaatgaactgcgattc
attcaacacatgacgcaacagcctgccgcacagcgcttccagatcggacagaatacagta
aacgtgcagacgactcttccgccggccccacaggccccccaggtgtcatttgctcggcct
ggtttgacgtatcagcctctgagggtaggttttcaggtaccggcgaatgttcgcctcgct
gcccctggagctggaactattcctaccacaggaaccccatccactataaccttgactctt
ggaccagctacgcaagtcagtaccgtcagaactttgtcgaacaacgcgcaggtttcgcgg
ccataa
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integrated database retrieval system
