Pocillopora damicornis (lace coral): 113674589
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Entry
113674589 CDS
T05773
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04120
Ubiquitin mediated proteolysis
pdam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113674589
04120 Ubiquitin mediated proteolysis
113674589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113674589
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113674589
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
U-box type E3
113674589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
APC_rep
Motif
Other DBs
NCBI-GeneID:
113674589
NCBI-ProteinID:
XP_027046872
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MSELPPDEVRRRRLARLNQGTMSSSHPPSDSHSIPVRTSLKPLAEGSAVSTQDSGYGSLS
QSFEFDEQSQDTGDKCGKRTSPTCSSSPSENFKFKRTRDGFDKDDTSHVKMSSVTDEHIV
KSICSIFKVSFKSSEVSCDTVYLPTLAEDLSQVDLSSGTVCNVINQVIMERLTQFRAHQD
GMSVSPTLTIAQETSQMAIDDNLTDCRSTECISLLGEGRANPSPPNCVKESTTVYQSKLL
KYLVNSYNCSLNEEKNYPKRSQEERWITLLTQARRQCVLFSVLILQGCFSLDRSVLQRSP
LVHLFINEECDIPFTFLVELVTTVASDSHLCMKIFKPVLLSLNQEMQNCHLAAEGFKAPL
LALSKLCDIRLGTTSVRPICNLMVALSNMWIPSPLSKAEGKEIERLSLIGPFLSLSVFSE
ECPQIVDRYFSESSENVKLVNVTLRSALRIVRTEVFKIIHSMLVSTESRDACLQFIASVL
ARNYRKAQLQVDDRQVASDGFMLNFMTVLQQLCAKVKIEKVDSLYLHHPKSRVNISQESR
LKLTSQQVKEWKQELDSKNAWLEPKFPTECFFMAIQAHHLAILPACRRHSRRQKAHRELT
RMIEHLESHESEWIDTPMASRNKGLLKKWREQIKKLENGKACSDVVLLDDELLRGCLKFY
GFLATWILRLVDPNKKGISIPLPEKIAMELASLPDYFVGDVAEFLLFVNMHAHHVLEDPA
MNDIVTFFVVFVCSPNYISNPYLVAKIVEVLFVMNPSIQPAASKIHEMIVSHPLALDHLA
PALMNFYTDVETTGSSNEFYDKFSIRYHISIIMKSLWQDVGHRGAIMKQSRTVQFVRFVN
MLINDTTFLLDESLDSLKSINETQQMMANVADWEALPRDMRTSRLRQLSTDERQCRSYLT
LASETLDMMLYLTKHVQAPFLRPELIDRIAAMLNFNLQQLCGPKCRNLKVKNPEKYGFEP
KTLLDRLTQIYVNLDSEEFAKAVAGDQRSYRRELFSDAAKHLHKTLLKTEAEIYRFKEFA
SKVEIKAAENAARNEDYDDAPDEFKDPLMMTLMLEPVILPTSGKIMDRAVITRHLLNSDT
DPFNRQPLTTDMLQPATELRIQIEEWLQNRQRED
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactaccacccgacgaggttaggcgtcgccgcctggctaggttgaaccaaggt
accatgtcatcatcccatcctccatctgacagtcactctattcctgtaaggacaagctta
aaacccttggcagaaggttctgcagtgagcactcaggacagtggttatggctctttatca
caatctttcgagtttgatgaacaatcacaggacactggtgataaatgtggcaagcgcacc
tccccaacttgttcttcttctccttcagagaattttaaattcaagaggacgagagatgga
tttgacaaagatgacacttctcatgttaagatgagtagtgtgactgatgaacatattgta
aaaagtatttgcagtatatttaaagtttcctttaagagctcagaggtttcctgtgacaca
gtttacttaccaacactagctgaggatcttagtcaagttgatctaagctcaggaactgtt
tgtaatgtcataaaccaagtgatcatggagcgtctaacccagtttcgtgcacatcaagat
ggaatgagtgttagtcctacacttacaattgcgcaggaaacctcgcaaatggctattgat
gataacttaactgactgcaggtcaactgaatgtatcagtttattaggggagggcagagcc
aatccttcaccaccaaactgtgtaaaagagtcaaccactgtgtatcagtccaagctgctt
aaatatttggttaatagctataattgctcactgaatgaagaaaaaaactatcccaagaga
tcccaggaggaaagatggataacgttgttaactcaggctcgtcgccagtgtgtgttgttt
tcagtgcttattcttcaaggatgtttttctctggacaggtcagtccttcagagatcaccc
ttggtacacttatttatcaatgaagaatgtgacattcctttcactttccttgttgaactt
gtcacaacagtagcaagtgactcacatttatgtatgaagatttttaagccagtgctgttg
agcttaaatcaagaaatgcaaaattgtcatcttgcagctgaaggatttaaagctcccctg
ttggcactgtcaaaactgtgcgatatccgcctgggaacaacttcagtgagacctatttgt
aacttgatggttgcgttatccaacatgtggatcccatcacccttatcaaaagctgaagga
aaagaaattgagagactgtctctcattggaccatttctcagtctgtcagtattttctgaa
gaatgtccgcagattgttgatcgttacttttccgagtcatcagaaaatgttaagctggtg
aatgtgactttgagaagtgcccttcgcattgttaggacagaggtattcaagataattcat
agtatgcttgtgtctacggagagtcgggatgcttgtttacaattcattgcttcagtctta
gcaagaaattaccgcaaggcacagctacaggttgatgatagacaagttgcttccgatgga
tttatgttaaacttcatgactgtattgcaacaactgtgtgcaaaggttaaaattgagaag
gttgatagtttgtatctccatcatcccaaatcaagagtgaacatctcacaagagtccagg
ttgaaacttacttcacagcaagttaaagaatggaaacaggaactagatagtaaaaatgcg
tggttggaaccaaaatttcccactgagtgtttctttatggccattcaagcccatcattta
gcaattttaccggcttgtagaagacattctcgacgacaaaaagctcaccgggagttaaca
cgcatgattgaacatctggaatcccatgaaagcgagtggatagatactccgatggcctct
agaaacaagggtctgttaaagaaatggagagagcagatcaagaaactagaaaatggtaag
gcttgctcggatgtcgttttacttgatgatgaacttctgcgtggctgtttaaagttctat
gggtttttggctacatggatcttgagactagtggatcctaacaaaaaagggatcagtatc
cctttgccagaaaagattgccatggagcttgcgtcccttccggactattttgtcggtgat
gtggctgagtttttgctctttgtcaacatgcatgcacaccacgtgctggaggatcctgcc
atgaatgacattgtcaccttttttgttgtatttgtttgttcaccaaactacatatcaaat
ccttatcttgtggcgaaaattgtcgaggtattgtttgtgatgaatcccagcattcaacca
gcagcctcaaagatccatgagatgattgtctctcatccattggcgttggaccatttagcc
ccagcacttatgaatttttatacagatgtagaaacgactggcagctcaaatgagttttat
gataagtttagtataagatatcacatttccataatcatgaaaagtttatggcaagatgtg
ggccacaggggagccatcatgaagcaaagcaggacggttcagtttgttcgctttgtaaac
atgttgattaatgacacaacatttctgctggatgaatccttggattcattaaaaagcatc
aatgaaactcagcagatgatggccaatgtagcagactgggaggcattaccaagggacatg
cgtacctctcgtcttcgacaactttccactgacgagcggcagtgccggtcttatcttacc
cttgcctcggagacattagatatgatgctttacctcactaaacatgtacaggcgcctttt
cttaggccggaattgattgatcgaatagctgctatgttgaattttaacctacaacaactt
tgtggaccgaagtgcaggaatttaaaggttaaaaacccagaaaaatatggatttgaaccc
aagactcttctggatagattaacacagatttatgtgaatctagactcggaagaatttgca
aaagctgttgctggtgaccagcgatcatataggagagaattattttccgacgccgcgaaa
catcttcacaaaaccttgctgaagacagaggcagagatttaccggtttaaagaatttgcc
tcaaaggtagaaatcaaagctgccgaaaacgctgctcgcaatgaggactatgatgatgca
ccggatgagtttaaagatcctctcatgatgacgctcatgcttgagcctgtgatcctacca
actagtggtaaaattatggatagggcagttatcacgcgccatttattaaactctgacacg
gatccttttaatcgacaaccacttacaactgacatgctacagccagcgactgaactcagg
atacagatagaggagtggctacaaaaccgccaaagagaggattaa
DBGET
integrated database retrieval system
