KEGG   Pocillopora damicornis (lace coral): 113675326
Entry
113675326         CDS       T05773                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
pdam04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113675326
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113675326
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdam04147]
    113675326
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113675326
Exosome [BR:pdam04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   113675326
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113675326
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 113675326
NCBI-ProteinID: XP_027047687
LinkDB
Position
Unknown
AA seq 1683 aa
MMGDPGCNGTKGERGIPGNPGNPGPKGNMGLPGNVGMKGEKGSSATDVVGAKGDTGPPGE
RGDAGERGDRGSQGGQGPPGEKGEPGPPGPDGARGEKGNQGIAKQGAKGKMGEPGVKGEK
GKPMNIEEFKGSNLTVIRVKVGDYLLCFLNCNLKIDNLKIEEHFMKNFLSKHPGVKGDKG
EPGQSGSKGEKGDRGPSNSGPEGIQGPTGPKGDPGQKGEPGETGTRGAPGEDGPQGPPGT
QGDEGPLGERGATGNSGDPGEPGLKGDRGDRGPEGVGPPGPDGPKGDTGPPGFPGAGGPK
GDRGNPGATGPPGPPGPQGTQGDPGPTGPPGGLGLPGNPGMKGATGNPGPRGLPGPKGDK
GPRGITVFGDQGMDGEPGQRGEKGDKGEQGFPGPQGDSESGPPGEKGNQGPPGSQGEDGP
KGSQGPKGEACGDCPEGPQGPSGEDGESGPQGPSGTSGSPGDPGPQGDPGAPGPQGRSGR
DGEPGLQGDPGEAGAPGPKGEKGEVIRVVGDKGEKGKPGVEGIPGDQGPPGAEGAQGPPG
PKGSTGPRGLKVCPFHIKKKKWLLLFIVFQGERGSDGKDGKTGETGQRGDKGMKGEPGEV
VNGPKGKDGEKGDKGDLGAKGEKGYCLNFGQLKNMTKGEKGEPGATGPPGPKGDNGGLGP
RGERGQTGQKGKTGMPGKNGTGIPGPPGPPGPQGPNGPPGPKGDPGFRGDKGARGPEGPP
GSDGDKGEKGDIGPLGNPGSPGSPGKNGAQGDPGERGERGSDGLKGEPGEKGSNGQAGSP
GAPGQTGPRGFPGDRGAKGDAVVGPRGPSGKEGPKGQPGQKGEPGPPGRDGDPGNDGDVG
NPGEKGKEGAAGPKGVEGPPGLKGEVGEPGNIGEKGLPGIPGGRGDQGDKGSQGTEGISG
QQGVEGPKGDEGPPGRQGFPGMKGNLGMKGEQGPPGKSNATVIPGDKGDKGDRGPPGPPG
RNGEDGIDGVAGDIGPRGDPGPDGAPGEPGQAGTPGVPGTSGDKGEPGLRGPAGKEGPKG
QRGPAGPPGEQGPRGAVGDRGAQGSKGDVGPPGIGIPGSPGDPGLSGDPGARGDDGEPGP
SGKDGVQGPPGPPGSPGDKGNAGPKGDQGNTGETTVVQGPKGERGQAGRNGVDGADGTNG
EPGPPGQPGNPGPPGNVGLPGDPGPIGSAGPPGENGLAGDPGPKGEKGQEGSAGQPGVKG
DTGIKGNAGQPGQQGDQGPPGEAGANGEPGLKGEPGPPGPNGSPGENGATGANGDPGQPG
PPGDAGAKGSTGPVGPPGPPGPKGDGGMEGFPGDQGEPGDPGENGITGLPGEKGNDGFPG
VTGDKGDTGATGPPGPRGDPGRGEGSPGEKGERGLDGINGQDGEPGPSGPRGPPGPQGPK
GDDGAPGVNGLDGPIGDKGDRGIAGQPGLPGDPGLPGPPGESGLPGPPGEADFGFYVVRH
SQTAELPDCPADTVSLWEGYSLLYVQGNERAHGQDLGQPGSCLPKFSTMPFLFCNLNENC
NLASRNDYTFWLSTPEPIPMMPVQDQDVKPFISRCRVCEAPAMVMALHSQSMVEPDCPEE
WQPLWRGYSFLMHTSAGNDGAGQLLSSPGSCLEDFRTSPFIECHGRGTCHYYGSTYSFWL
TTVTDEEQFRTPTSKTIKSGNQREHVSRCTVCMKKVYNNNNGNGNGGGGGVTDPLVDPRD
LPN
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgatgggagacccaggctgtaatggaacaaagggagagcgaggtatcccaggaaaccct
ggaaacccaggacccaaaggaaacatgggcttgcctggcaatgtaggaatgaaaggtgaa
aaaggttcatcagccactgatgttgttggagctaagggagatacaggacctccaggagaa
agaggagatgctggagagcgcggggacagaggatcgcaaggtggccagggaccaccagga
gagaaaggggaacctggaccaccaggccctgatggagcaaggggagaaaagggaaatcag
gggattgcaaaacaaggagcaaagggaaagatgggtgaaccaggtgtgaaaggagaaaag
ggaaaaccaatgaacatcgaagaatttaaaggatcaaacctcactgtaatcagagtaaag
gttggtgattatttactttgttttctcaattgcaatcttaaaattgacaatctcaagatt
gaggaacacttcatgaaaaattttcttagcaaacatccaggggtcaagggagacaaaggt
gaaccgggccagtctggtagcaaaggagagaaaggagatagaggaccatccaactctggt
ccagaaggtatccaaggacctactgggccaaaaggagaccctggtcaaaagggagaaccg
ggagagactggtacaagaggagctccaggagaagatggtccacagggacctcctggtaca
caaggagatgaaggtcctcttggagaaagaggggcaacaggaaattctggtgatcctgga
gaaccaggcttgaaaggagacagaggagacagaggacctgaaggagttggaccaccaggc
cctgatggccccaagggtgacacagggcctcccggttttccaggtgcaggaggaccaaaa
ggtgacagaggaaatcctggtgccacaggccctccaggaccacctggaccacaaggaaca
cagggtgacccaggacctactggacctccaggaggattgggacttcctggcaatcctggg
atgaagggtgctactggtaatccagggccccggggcttgccaggtccaaagggggataaa
ggaccacgtggaatcactgtctttggagatcaaggcatggatggagaacctggacaaaga
ggagagaaaggagacaagggagaacaaggatttccaggcccacaaggtgatagcgaaagt
ggtcccccgggagaaaaaggtaatcaaggaccaccagggtctcaaggagaagatggccca
aaggggtcccaaggtcccaaaggtgaagcttgtggtgactgtccagagggcccccaaggt
ccttcaggagaagatggtgaaagtggcccccaagggccaagtggtacctcagggtcacca
ggcgaccctggacctcaaggtgacccaggggctcctggacctcaaggacgcagtggacgt
gacggagaaccaggtctgcaaggtgatcctggcgaagctggagctcctgggcctaaaggt
gaaaagggagaggttatcagagtggtaggggacaaaggggagaagggaaaaccgggtgtg
gagggtatccctggtgatcagggtcctccaggagcagagggagcacaagggccacctgga
cccaaggggtctaccggacctcgcggacttaaggtttgtccttttcatattaaaaaaaaa
aaatggttgctattattcattgtgtttcagggtgagagaggctcggatggaaaggatggg
aaaactggcgagacaggtcagaggggagataaaggaatgaaaggagagccaggagaggtt
gtaaatgggcctaaagggaaagatggtgaaaaaggcgataaaggagatttgggggctaag
ggcgaaaaaggatattgtcttaactttggacaacttaagaacatgacgaagggcgaaaaa
ggcgagccaggtgccacaggcccccccggtccaaaaggagataatggagggctaggacca
cgaggagaaaggggccagacaggacagaaaggaaaaacaggaatgccaggaaagaatgga
actggaattccagggccgccgggacctcctggtcctcaaggtcccaacggaccaccaggt
cccaaaggtgacccaggattcagaggtgacaaaggtgcccgtggccctgaaggtcctcca
ggtagcgatggtgataagggagagaagggagacattgggcctctcggtaaccctgggtca
cccggtagtcccggtaaaaatggagcccaaggggaccctggagaaagaggcgagcggggt
agcgatggtctgaaaggggaacctggtgaaaaggggagtaacggccaggctggcagtcca
ggagcgccaggccagacaggacctcggggattcccaggagatagaggagccaagggtgat
gctgtagtcggaccacgtggtccttcagggaaagaagggcctaaaggtcagcccggacaa
aagggtgaaccaggaccaccaggaagagacggagacccaggaaacgacggcgatgttgga
aaccctggagagaaaggaaaagaaggagctgccggtccaaaaggtgtcgaggggccccca
ggattgaaaggagaggttggtgagcccggaaatatcggagagaagggacttccaggaatc
ccaggaggccgtggcgatcaaggcgataagggcagtcaaggaacagaaggaatttcaggg
cagcagggcgtagaaggtccaaagggtgatgagggtccaccaggcagacaaggcttccca
ggcatgaagggaaacttgggtatgaaaggagaacaaggtccgccgggaaaatcaaatgca
acagtaatacctggagataaaggcgacaagggagatcgcggccctcctgggccaccagga
agaaatggtgaagatggtattgatggagtagcgggagatattggtccccgtggtgaccca
gggcctgatggtgcacccggtgaacctggacaagctggtacgcccggtgtaccgggaaca
tcaggtgacaaaggggaaccaggactcagaggacctgcagggaaagagggccctaaaggc
cagagaggacccgcgggcccacctggagaacaagggccacggggagccgtcggagacaga
ggcgcacaaggaagtaagggcgatgttggcccacctggaattggtatccctgggtcccca
ggggaccctggtctaagtggcgatccaggtgctcgtggagatgatggagagccggggccg
agtggaaaggatggagtacaaggacctccagggcctcctggctccccgggagataaaggt
aacgcagggcctaaaggcgaccaaggaaatacaggagaaacgacagtcgttcagggccct
aaaggggagagaggtcaagctggcagaaatggtgtggatggcgctgatggaaccaacggt
gaacccggaccccctggacagcctggaaaccctggaccgccagggaacgtaggtctgcca
ggtgacccaggtccgataggttctgctggtccccctggtgagaatggtttggcgggagac
ccaggccctaaaggagaaaagggacaagagggttcagccgggcagccaggagtcaagggt
gatacaggtattaaaggtaatgcaggccaaccaggtcagcagggagaccaggggccacca
ggagaggcaggagcgaatggcgagcctgggttgaaaggagaaccaggaccaccaggacca
aacggtagccctggagaaaatggagcaactggggcaaacggagaccctggtcaacctggt
ccccctggggatgctggtgccaaaggaagcacaggaccggtgggaccgccaggaccaccc
ggacccaaaggagatggaggaatggagggttttccaggagatcagggggagccaggagac
cctggggaaaatggtattactggtctacccggagagaagggaaatgatggatttcccggt
gttactggtgacaaaggagatactggggctactggtcccccaggcccacggggtgatcct
ggaagaggagaaggaagtcccggcgaaaaaggtgaacgtggcttggatggaattaatggg
caggatggtgaaccaggtccctcagggccccgagggcctcctgggcctcagggtccgaaa
ggtgatgacggagcccctggagtcaatggtttagatggacccataggtgacaagggagat
cgaggcatagctggacaacccggtctgccgggagatcctggtctgccaggtcctccagga
gaaagcggacttcctggacctccgggtgaagcagatttcggattttatgtggtgcggcat
agtcaaactgcagagcttcctgattgcccagccgatacggtatcgctatgggaaggctac
agtttgctttacgtgcagggcaatgaacgtgctcacggccaagatcttggtcagcccggt
tcttgtcttccaaaattcagcaccatgcctttcctgttctgtaacctgaacgaaaactgt
aacctggcctcgagaaatgactacaccttctggctgtcgacacccgaacctattcccatg
atgcctgtgcaagaccaagatgtgaagccgtttatcagtcgctgccgtgtctgtgaggcg
ccagctatggtcatggctcttcacagccagagcatggttgagccagattgtcctgaggaa
tggcagccactctggagaggctacagcttcttgatgcacacaagcgccggaaacgacggt
gctggccagcttctttcatccccaggctcctgtctggaggacttccgtaccagtcctttc
atcgagtgccacggtcgcgggacatgtcattactacggcagcacgtacagtttctggtta
acaaccgtcacggacgaggagcagttccgaacaccgacatcaaagacgattaaatcagga
aaccaacgagaacacgtcagtcgctgcactgtttgtatgaaaaaggtttacaacaacaat
aatggaaacggaaatggcggaggaggtggggtcacggatcccctcgtcgaccctagagac
ttgccaaactaa

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