Pocillopora damicornis (lace coral): 113675326
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Entry
113675326 CDS
T05773
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04512
ECM-receptor interaction
pdam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113675326
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113675326
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdam04147
]
113675326
00536 Glycosaminoglycan binding proteins [BR:
pdam00536
]
113675326
Exosome [BR:
pdam04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113675326
Glycosaminoglycan binding proteins [BR:
pdam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113675326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113675326
NCBI-ProteinID:
XP_027047687
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MMGDPGCNGTKGERGIPGNPGNPGPKGNMGLPGNVGMKGEKGSSATDVVGAKGDTGPPGE
RGDAGERGDRGSQGGQGPPGEKGEPGPPGPDGARGEKGNQGIAKQGAKGKMGEPGVKGEK
GKPMNIEEFKGSNLTVIRVKVGDYLLCFLNCNLKIDNLKIEEHFMKNFLSKHPGVKGDKG
EPGQSGSKGEKGDRGPSNSGPEGIQGPTGPKGDPGQKGEPGETGTRGAPGEDGPQGPPGT
QGDEGPLGERGATGNSGDPGEPGLKGDRGDRGPEGVGPPGPDGPKGDTGPPGFPGAGGPK
GDRGNPGATGPPGPPGPQGTQGDPGPTGPPGGLGLPGNPGMKGATGNPGPRGLPGPKGDK
GPRGITVFGDQGMDGEPGQRGEKGDKGEQGFPGPQGDSESGPPGEKGNQGPPGSQGEDGP
KGSQGPKGEACGDCPEGPQGPSGEDGESGPQGPSGTSGSPGDPGPQGDPGAPGPQGRSGR
DGEPGLQGDPGEAGAPGPKGEKGEVIRVVGDKGEKGKPGVEGIPGDQGPPGAEGAQGPPG
PKGSTGPRGLKVCPFHIKKKKWLLLFIVFQGERGSDGKDGKTGETGQRGDKGMKGEPGEV
VNGPKGKDGEKGDKGDLGAKGEKGYCLNFGQLKNMTKGEKGEPGATGPPGPKGDNGGLGP
RGERGQTGQKGKTGMPGKNGTGIPGPPGPPGPQGPNGPPGPKGDPGFRGDKGARGPEGPP
GSDGDKGEKGDIGPLGNPGSPGSPGKNGAQGDPGERGERGSDGLKGEPGEKGSNGQAGSP
GAPGQTGPRGFPGDRGAKGDAVVGPRGPSGKEGPKGQPGQKGEPGPPGRDGDPGNDGDVG
NPGEKGKEGAAGPKGVEGPPGLKGEVGEPGNIGEKGLPGIPGGRGDQGDKGSQGTEGISG
QQGVEGPKGDEGPPGRQGFPGMKGNLGMKGEQGPPGKSNATVIPGDKGDKGDRGPPGPPG
RNGEDGIDGVAGDIGPRGDPGPDGAPGEPGQAGTPGVPGTSGDKGEPGLRGPAGKEGPKG
QRGPAGPPGEQGPRGAVGDRGAQGSKGDVGPPGIGIPGSPGDPGLSGDPGARGDDGEPGP
SGKDGVQGPPGPPGSPGDKGNAGPKGDQGNTGETTVVQGPKGERGQAGRNGVDGADGTNG
EPGPPGQPGNPGPPGNVGLPGDPGPIGSAGPPGENGLAGDPGPKGEKGQEGSAGQPGVKG
DTGIKGNAGQPGQQGDQGPPGEAGANGEPGLKGEPGPPGPNGSPGENGATGANGDPGQPG
PPGDAGAKGSTGPVGPPGPPGPKGDGGMEGFPGDQGEPGDPGENGITGLPGEKGNDGFPG
VTGDKGDTGATGPPGPRGDPGRGEGSPGEKGERGLDGINGQDGEPGPSGPRGPPGPQGPK
GDDGAPGVNGLDGPIGDKGDRGIAGQPGLPGDPGLPGPPGESGLPGPPGEADFGFYVVRH
SQTAELPDCPADTVSLWEGYSLLYVQGNERAHGQDLGQPGSCLPKFSTMPFLFCNLNENC
NLASRNDYTFWLSTPEPIPMMPVQDQDVKPFISRCRVCEAPAMVMALHSQSMVEPDCPEE
WQPLWRGYSFLMHTSAGNDGAGQLLSSPGSCLEDFRTSPFIECHGRGTCHYYGSTYSFWL
TTVTDEEQFRTPTSKTIKSGNQREHVSRCTVCMKKVYNNNNGNGNGGGGGVTDPLVDPRD
LPN
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagacccaggctgtaatggaacaaagggagagcgaggtatcccaggaaaccct
ggaaacccaggacccaaaggaaacatgggcttgcctggcaatgtaggaatgaaaggtgaa
aaaggttcatcagccactgatgttgttggagctaagggagatacaggacctccaggagaa
agaggagatgctggagagcgcggggacagaggatcgcaaggtggccagggaccaccagga
gagaaaggggaacctggaccaccaggccctgatggagcaaggggagaaaagggaaatcag
gggattgcaaaacaaggagcaaagggaaagatgggtgaaccaggtgtgaaaggagaaaag
ggaaaaccaatgaacatcgaagaatttaaaggatcaaacctcactgtaatcagagtaaag
gttggtgattatttactttgttttctcaattgcaatcttaaaattgacaatctcaagatt
gaggaacacttcatgaaaaattttcttagcaaacatccaggggtcaagggagacaaaggt
gaaccgggccagtctggtagcaaaggagagaaaggagatagaggaccatccaactctggt
ccagaaggtatccaaggacctactgggccaaaaggagaccctggtcaaaagggagaaccg
ggagagactggtacaagaggagctccaggagaagatggtccacagggacctcctggtaca
caaggagatgaaggtcctcttggagaaagaggggcaacaggaaattctggtgatcctgga
gaaccaggcttgaaaggagacagaggagacagaggacctgaaggagttggaccaccaggc
cctgatggccccaagggtgacacagggcctcccggttttccaggtgcaggaggaccaaaa
ggtgacagaggaaatcctggtgccacaggccctccaggaccacctggaccacaaggaaca
cagggtgacccaggacctactggacctccaggaggattgggacttcctggcaatcctggg
atgaagggtgctactggtaatccagggccccggggcttgccaggtccaaagggggataaa
ggaccacgtggaatcactgtctttggagatcaaggcatggatggagaacctggacaaaga
ggagagaaaggagacaagggagaacaaggatttccaggcccacaaggtgatagcgaaagt
ggtcccccgggagaaaaaggtaatcaaggaccaccagggtctcaaggagaagatggccca
aaggggtcccaaggtcccaaaggtgaagcttgtggtgactgtccagagggcccccaaggt
ccttcaggagaagatggtgaaagtggcccccaagggccaagtggtacctcagggtcacca
ggcgaccctggacctcaaggtgacccaggggctcctggacctcaaggacgcagtggacgt
gacggagaaccaggtctgcaaggtgatcctggcgaagctggagctcctgggcctaaaggt
gaaaagggagaggttatcagagtggtaggggacaaaggggagaagggaaaaccgggtgtg
gagggtatccctggtgatcagggtcctccaggagcagagggagcacaagggccacctgga
cccaaggggtctaccggacctcgcggacttaaggtttgtccttttcatattaaaaaaaaa
aaatggttgctattattcattgtgtttcagggtgagagaggctcggatggaaaggatggg
aaaactggcgagacaggtcagaggggagataaaggaatgaaaggagagccaggagaggtt
gtaaatgggcctaaagggaaagatggtgaaaaaggcgataaaggagatttgggggctaag
ggcgaaaaaggatattgtcttaactttggacaacttaagaacatgacgaagggcgaaaaa
ggcgagccaggtgccacaggcccccccggtccaaaaggagataatggagggctaggacca
cgaggagaaaggggccagacaggacagaaaggaaaaacaggaatgccaggaaagaatgga
actggaattccagggccgccgggacctcctggtcctcaaggtcccaacggaccaccaggt
cccaaaggtgacccaggattcagaggtgacaaaggtgcccgtggccctgaaggtcctcca
ggtagcgatggtgataagggagagaagggagacattgggcctctcggtaaccctgggtca
cccggtagtcccggtaaaaatggagcccaaggggaccctggagaaagaggcgagcggggt
agcgatggtctgaaaggggaacctggtgaaaaggggagtaacggccaggctggcagtcca
ggagcgccaggccagacaggacctcggggattcccaggagatagaggagccaagggtgat
gctgtagtcggaccacgtggtccttcagggaaagaagggcctaaaggtcagcccggacaa
aagggtgaaccaggaccaccaggaagagacggagacccaggaaacgacggcgatgttgga
aaccctggagagaaaggaaaagaaggagctgccggtccaaaaggtgtcgaggggccccca
ggattgaaaggagaggttggtgagcccggaaatatcggagagaagggacttccaggaatc
ccaggaggccgtggcgatcaaggcgataagggcagtcaaggaacagaaggaatttcaggg
cagcagggcgtagaaggtccaaagggtgatgagggtccaccaggcagacaaggcttccca
ggcatgaagggaaacttgggtatgaaaggagaacaaggtccgccgggaaaatcaaatgca
acagtaatacctggagataaaggcgacaagggagatcgcggccctcctgggccaccagga
agaaatggtgaagatggtattgatggagtagcgggagatattggtccccgtggtgaccca
gggcctgatggtgcacccggtgaacctggacaagctggtacgcccggtgtaccgggaaca
tcaggtgacaaaggggaaccaggactcagaggacctgcagggaaagagggccctaaaggc
cagagaggacccgcgggcccacctggagaacaagggccacggggagccgtcggagacaga
ggcgcacaaggaagtaagggcgatgttggcccacctggaattggtatccctgggtcccca
ggggaccctggtctaagtggcgatccaggtgctcgtggagatgatggagagccggggccg
agtggaaaggatggagtacaaggacctccagggcctcctggctccccgggagataaaggt
aacgcagggcctaaaggcgaccaaggaaatacaggagaaacgacagtcgttcagggccct
aaaggggagagaggtcaagctggcagaaatggtgtggatggcgctgatggaaccaacggt
gaacccggaccccctggacagcctggaaaccctggaccgccagggaacgtaggtctgcca
ggtgacccaggtccgataggttctgctggtccccctggtgagaatggtttggcgggagac
ccaggccctaaaggagaaaagggacaagagggttcagccgggcagccaggagtcaagggt
gatacaggtattaaaggtaatgcaggccaaccaggtcagcagggagaccaggggccacca
ggagaggcaggagcgaatggcgagcctgggttgaaaggagaaccaggaccaccaggacca
aacggtagccctggagaaaatggagcaactggggcaaacggagaccctggtcaacctggt
ccccctggggatgctggtgccaaaggaagcacaggaccggtgggaccgccaggaccaccc
ggacccaaaggagatggaggaatggagggttttccaggagatcagggggagccaggagac
cctggggaaaatggtattactggtctacccggagagaagggaaatgatggatttcccggt
gttactggtgacaaaggagatactggggctactggtcccccaggcccacggggtgatcct
ggaagaggagaaggaagtcccggcgaaaaaggtgaacgtggcttggatggaattaatggg
caggatggtgaaccaggtccctcagggccccgagggcctcctgggcctcagggtccgaaa
ggtgatgacggagcccctggagtcaatggtttagatggacccataggtgacaagggagat
cgaggcatagctggacaacccggtctgccgggagatcctggtctgccaggtcctccagga
gaaagcggacttcctggacctccgggtgaagcagatttcggattttatgtggtgcggcat
agtcaaactgcagagcttcctgattgcccagccgatacggtatcgctatgggaaggctac
agtttgctttacgtgcagggcaatgaacgtgctcacggccaagatcttggtcagcccggt
tcttgtcttccaaaattcagcaccatgcctttcctgttctgtaacctgaacgaaaactgt
aacctggcctcgagaaatgactacaccttctggctgtcgacacccgaacctattcccatg
atgcctgtgcaagaccaagatgtgaagccgtttatcagtcgctgccgtgtctgtgaggcg
ccagctatggtcatggctcttcacagccagagcatggttgagccagattgtcctgaggaa
tggcagccactctggagaggctacagcttcttgatgcacacaagcgccggaaacgacggt
gctggccagcttctttcatccccaggctcctgtctggaggacttccgtaccagtcctttc
atcgagtgccacggtcgcgggacatgtcattactacggcagcacgtacagtttctggtta
acaaccgtcacggacgaggagcagttccgaacaccgacatcaaagacgattaaatcagga
aaccaacgagaacacgtcagtcgctgcactgtttgtatgaaaaaggtttacaacaacaat
aatggaaacggaaatggcggaggaggtggggtcacggatcccctcgtcgaccctagagac
ttgccaaactaa
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integrated database retrieval system