Pocillopora damicornis (lace coral): 113675788
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Entry
113675788 CDS
T05773
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113675788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113675788
03021 Transcription machinery [BR:
pdam03021
]
113675788
03036 Chromosome and associated proteins [BR:
pdam03036
]
113675788
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Helix-turn-helix
ARID
113675788
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113675788
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
113675788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
113675788
NCBI-ProteinID:
XP_027048194
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MFQPSHFQKMAQHLGIDSLSYEKEYNGFMTKLKNFHESKGTPFRRLPWLGGQYLDLYLLY
RKVTSAGGWVKVTEEKRWRDIAEVFNLPPTCTNAAFALRQHYSRYLESFERINFFGEDAE
DVLAAGRPHTPVGGGTFTQHVPSVATSDYISVISTSKDPKRNFDKLVLSLQCGMPNEVDF
AINICMLLSNVSNSVFNLSKAPAVVDTLLAHVGVFSEDSHGLGELYEQWYAKQDMERDFT
RFWKEGLTVKGVEDILCSDSDDKTTDQGSLFHPSRKKIGAKDVECQRISQVGMIFYNFSF
DSANADVLASHPLCLKFLVLCICSNHGFLQRMAWETLSNLAEKMLMDPIESTSTQMFFQM
LHCFLDHKDRYHVINAMDVLGKLCTLERNDEVIETGLEPEAYQSLIKVLIISDVQLVLSS
LESLYNLSGVGQVTSDHIAEVDHSIDILVCLVTLDAESFGPEALSEVQILEKRIPTALPA
TPKPQPATTPVAPPQPREPVQQQQAPSSSPSPGPVTSPSPTPAPIKTTGTEIDPETFTFN
WLQGTYEHSPGNSVSRIDIYADYLSSCSRLARVGILNATAFNRIIKLAFPDGQLRRVQSG
VNVQYVLAGLKRRANPLPVKSRTDSPAPQHVASPHIATQQQGQRISSGQQAINRNPTPPV
QSQMTPGWNPPKQQNVTVAQQTLPSSMPRQYEQRSTPQVSVSNQPQMLGMAQLPRRPSTS
SQGAIQATVDQGVRQFTTPALQQQNLQTVANQRHMIGGQTQRSLGPTDKAQTLERVAAMH
RASVEGTSALQAQNPQALQHHSQGKIMQRMPISSQSPGPSRGDQQQMVHSMPPTVQASPG
QKGSSGAFPAQSIPADVPRSPVPPQIPLLRSPLPSARSTQPLTSQPTQTPLSAGFIHRPV
TAAEPSSYRPTAAYRQQAPAFPQQQSVRPAPPAYSGRPLYHGSYPPLAPKPAPGVNVQLS
QESQLRKEPRSHPGTPQVVRPPFLREEVTKRQIFAPHENAPNTPPSPVLSPSSRSGQPFR
GSQPDLSGGHGGRNVRPGLIKNSRQPISGIRQEGVVLIAQEERAADVVSSGLLEGAAEQK
IVVIENKNRTDIIPNNSLSSAHANTAHEHSKLSSGNASVNTGDEICRSNIDEHFDQSLER
MPLNQGEKNSLQSIPKSTLYPSSNGSLKRDLNIHATYGSRTSASNEENLNGQRDNASDEF
GQVKRPRLDSRMSSLENELENSSSIPSRTGSPTPLVNGDIKADPRNKLIDKLLDKDLHLP
LNGVCGIDSSDIDLLASDGERLSSSKASSPDLFGSETNSDFGKYLEESDTDTGLFSDVLQ
GDLRIDPMENGTEGTHQTASKMPNFPVGTCNEGAIVSSDKGIPAGATQQQGKIPIPPTVR
PDPVPGQCNATVNRLSLTGNSLWNSTNNVNLESKTGLSLSSASVNVQKVTFPHQNNQPSS
QQMVVTHDSSFIQPFTTPKNILPRPQGPDIVNSKAPVSQGLGIQQPLMAPSFHGGQQMAA
DQTALPRGNVAPSRGMPPGWAPSGVQHQQLPVAPHAARRVQPAAAIGFQVASPVGAPLVP
QGATVPPGSLSLGLSPGWQPQLQQQQKSVTVHPDVTTQGVATPGAAIHEATSTSQSRPPT
SPMQFQHPAMPPAVKNVVQNPVGSLLVTPTAPQVFAPTSPAHVSQAEFSAPQMVSFKPFR
CRWTTCYSSFDTSKELFAHVVSEHVPRDSLVMSCMWEGCPSVRRSRSSLLFHLQQKHSEA
SPAPNSLPPQPAQHQSPPVQPPPQPQRNPQPNPQPPPPSTPSTSFVPAYHFLARMLQSLQ
GEEESPLTKSVRLTAALVLRNVAQYSALARSLLRRHESRLSLIAMSNSEAANAIAACLFE
LSPHRKGSSEDSGVFFWAPSR
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaccgtcgcactttcaaaagatggcccagcatttgggcattgactctctgtcc
tacgaaaaggaatacaatggatttatgacaaagttgaagaactttcacgagtctaagggg
acgccatttagacgattgccgtggctaggagggcaatatttagacttatacctcttgtac
cgtaaggtaacttcagccggtggctgggtgaaggttacagaggagaagaggtggcgagac
attgctgaagtttttaatttgccgccaacatgtacgaacgccgctttcgctttacgacaa
cactactctcgctatttggaaagcttcgagagaatcaacttctttggggaagatgcagag
gatgttctagcagctggaagaccccatacaccagttggtggaggcacattcactcaacac
gttccttcagtggcaacatcagattatatttccgtcatctccaccagcaaagatccaaaa
agaaactttgacaagcttgttctttctcttcaatgtggcatgccaaatgaagtggatttt
gccattaacatttgtatgctgttgtcaaatgttagcaactccgtgttcaatctcagcaag
gcacctgcagtggtggatacattacttgcacatgttggggtattttctgaagattcccat
ggactaggagaattatatgaacagtggtatgcaaaacaggatatggagagagatttcaca
aggttttggaaggaaggtctaactgtgaaaggggtcgaggacattctatgtagtgacagt
gatgataagactacagaccagggatctctttttcacccttccagaaagaaaattggtgct
aaggatgttgagtgccaaagaatttctcaggttggcatgatcttttacaacttctccttt
gacagtgctaatgctgatgtgcttgcaagccatccattgtgcttgaagttcttagtgctg
tgcatttgcagtaatcatggatttctgcaaagaatggcttgggaaactctttcgaattta
gcagagaagatgctaatggacccaattgagtcaacaagtacacagatgttttttcagatg
ctacattgctttttagatcataaagatcgttaccatgtcatcaatgccatggatgttttg
ggcaaattgtgtaccctggaaagaaatgatgaggttatagaaactggccttgaacctgag
gcttatcaatcactcattaaagttctgattatcagtgatgttcagttggttttgtcttct
ctggaatcactctacaatttgtctggagtagggcaagtgacatctgatcatattgcagag
gttgatcatagtattgatattctggtgtgtttggtgactttggatgcagaatcttttgga
ccagaagccttatcagaggtgcaaatcttagaaaaaaggattccaactgccttgccagca
acaccaaagccacaaccagctacaacaccagttgctccaccacaaccaagagaaccagtt
caacaacagcaagccccatcttccagtccatcccctggtccagtgaccagtccctctcct
acaccagcccccatcaagacaacaggaactgaaattgacccagagacttttactttcaac
tggcttcagggaacttatgaacattcaccgggaaattctgtttctcgcattgacatatat
gcagactatctgtcatcttgtagtagactggctagagtaggaatccttaatgcaacagca
tttaatcgcatcatcaaattggcttttcctgatggccagcttcgaagggtgcagtctggg
gtaaatgtccaatacgtcctagcaggtttaaaacgtagagctaacccacttccagttaaa
agccgaacagattcaccagcacctcagcatgttgcaagccctcatatagcaactcagcag
caaggacagagaatatcctctggtcagcaggccatcaataggaatcccacccctcctgtt
cagagtcaaatgaccccaggatggaatccacctaaacagcaaaatgtgacagttgcacag
caaacactcccttcatcaatgccaaggcaatatgaacagaggtccacaccacaggtttct
gtgagcaatcaaccacagatgcttggaatggcccaacttccaagaagaccgagtacatct
agtcagggagccattcaagcaacggtagatcagggagtaagacaatttactacaccagct
ttgcaacagcaaaatctccaaactgtggccaatcaacggcacatgatcggagggcaaacg
caaaggagtcttggtccaactgataaggctcaaacccttgagagagtagcagctatgcat
agagcaagtgtggaaggaactagtgctctgcaggcacagaatccacaagccctccagcat
cattcccaggggaagatcatgcagagaatgcccatatcttcccaaagtccaggcccatct
agaggagatcaacagcaaatggttcacagcatgccaccaactgtgcaagcgtctccaggt
caaaagggctccagtggtgcttttccagctcaatccatccctgctgatgtacctcgcagt
cctgttcctccacagatcccactattgaggtctccacttccttcagcaaggtctacacaa
ccactcacatcacaaccaactcagacaccactttcagcaggcttcatacacagacctgtt
acagcagcagaaccatcctcatatcgaccaacagccgcctaccggcaacaagctcctgct
tttcctcagcagcaaagtgtacgccctgcaccacctgcttacagtgggcggcctctgtat
cacgggtcttacccaccccttgctcccaaacctgcaccgggagtcaatgttcaattatct
caagaaagccagttgaggaaggagcccaggagccatcccggaactccacaagtagtgaga
cctccctttcttagggaagaagttacaaaaagacagatttttgctcctcatgagaatgca
cccaatacaccaccctcgcctgttttgtccccttcctcaaggagtggacagccgttcagg
ggttctcaaccagacttatcaggtggacatggtggaagaaacgtcagacctggactaata
aagaacagcagacaaccgatttctgggattagacaagaaggtgtcgtcctcatagcacag
gaagagagggcagcagatgttgtttcttcaggccttttagagggcgcagcggaacaaaaa
attgtcgtcatagaaaacaaaaatagaacagatatcatcccaaataattcgctgtcttca
gcgcacgctaatactgcccatgagcattcaaaattatcatctgggaacgcgtcagttaat
acaggagatgaaatttgcagatcgaacattgatgaacattttgatcagtcattagagaga
atgccgttgaaccaaggagaaaaaaactctcttcagagtatacccaagtcaactttgtac
ccttccagtaatggttctttaaaaagagacttgaatattcatgcaacctacgggagtaga
acttctgcatcaaacgaggaaaacctgaatggccagcgcgataatgccagtgatgagttt
ggacaagtaaagaggccaagactagatagtagaatgtcctcccttgaaaatgaattagaa
aattcttcgtcgataccatctagaactggaagtccaacccctcttgttaatggtgacatc
aaggctgatccaaggaacaaactgattgataaacttttagataaggatttgcatttgcct
cttaatggcgtttgtggaatcgattcgtccgatatagaccttcttgcttccgacggagag
agactcagtagtagtaaggcgtcatcaccagatctctttggaagcgaaacaaattcggat
tttggtaaatatttagaggagagcgatacagatacgggcttgtttagtgatgttctgcaa
ggagatttaaggatagatccgatggagaatggtactgaaggcactcaccaaacggcatcg
aagatgccaaattttcccgtcggaacctgtaatgaaggtgcaattgtatccagcgataaa
ggcattcctgctggagctacgcagcaacaaggcaagattcctattcctccaacggtgaga
ccagaccccgttcctggccagtgtaatgctacggtcaatcggctatcacttacaggaaat
tcactctggaattctacaaacaatgtgaatcttgagtcaaagacaggcttaagcctttcg
tcagcgtctgtcaatgtacaaaaagttacatttccacatcaaaataaccagccgagttct
cagcaaatggtagtaactcatgattcttcattcattcagccttttacgacgccgaaaaac
atactgcccagacctcaggggccagatattgtcaatagcaaagctccagtctctcaagga
ttaggtattcaacaacccttgatggctccatcttttcatggagggcagcaaatggctgca
gatcaaacagccttaccacgtggaaatgtcgctccgagcagaggaatgccacccggctgg
gccccaagtggagttcaacatcagcaactgccggtagcaccacatgctgctcgcagggtt
cagcctgctgctgctattggatttcaggtagcctcaccagttggtgcacccctggtgccc
caaggtgctactgtgcctcctggttctctgagcttgggtttatcacctggttggcagcct
cagttacaacaacagcaaaaatctgtgactgttcacccggatgtgacgactcaaggtgtg
gccacacctggggcagcgattcacgaggcaacatctacgtctcaaagtagaccaccaact
agccccatgcagtttcagcaccctgccatgccaccagctgtgaagaacgttgttcaaaac
ccagttggatccttgctagttactccgactgctcctcaggtgtttgcacctacctctcct
gcgcatgttagccaagccgagttttcagcacctcagatggtgtctttcaaaccttttaga
tgtcgatggactacttgctatagctcatttgacaccagcaaagagttatttgcacacgtg
gttagtgaacatgtccctcgtgacagtctggtcatgtcgtgtatgtgggaaggttgccca
tcagtgcgccgctcacgttcgtcacttttatttcaccttcagcaaaaacacagtgaagcg
tcacccgctcccaactctctcccgccccaaccagctcaacatcagtctcctcctgtgcaa
cctcctccacaacctcagcgtaatccccagcctaatccccagcctcctccgccttccact
ccgtccacgtcatttgttcctgcatatcacttcctagctcgcatgttgcaatcattgcag
ggtgaagaagaatcgccgttgacgaagtcagtacggttaactgcagcccttgttctgaga
aacgtggcacagtactcagctttagccaggagcttattaagacgtcacgaaagtcgactg
tcacttattgccatgtccaactcagaagctgctaatgctattgcagcctgtctctttgaa
ttgtctccacatagaaagggttcgtcagaagactctggtgtctttttctgggcaccaagc
agataa
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integrated database retrieval system
