Pocillopora damicornis (lace coral): 113675867
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Entry
113675867 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04140
Autophagy - animal
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113675867
04148 Efferocytosis
113675867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113675867
Membrane trafficking [BR:
pdam04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
113675867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
WD40
zf_RING_Vps8
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
zf_RING_Vps8_fungal
TPR_GEMI5
WDR55
zf-C3H2C3
Vps39_1
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113675867
NCBI-ProteinID:
XP_027048267
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MADKTERNEFELRLKSGINDPEAEEDDDNEEDEDDDDDDEEEGSEEDEDEVEPKLKYERI
GNAMNTILNGEECASCMAVHTKFLALGTHYGVVHILDHQGNPSSSKKYPSHTTAINQISI
DQSGDYVASCSDDGRVVINGLYSSENNVQASFDTPVKSVALDPEFSKKRTKMYVTGGTKL
ILTERGWFRNKSSILHEGEGNIRTIKWKASLIAWADDTEVKVFDMNSHRVITHIKRETRN
YRPELYRCCLCWRDDVTLLIGWADMVQICVVKERLVPRSDLPPLVVEIVARFKTDYYISG
IAYLKDDLCCNFGFFFTENVVEENLFYIVSPKDLVLAKPRNIDDHIKWLMDHGKYEEALS
VSETNSKEVKKHNHQDIGRAFLKSLMEEGKYETAARLCIKVLSDDKKLWEDEVYKFARKH
QLEAIAPYIPTKAVKLSSAIYEMVLYDFLKKDVKKFQALIKEWPADLYNMKPIINAIQDQ
LDKDPKNRVLLETLGELYTRLKRYDKGLAIYLKLGHSDVFNLIHQHNLFSSIQDKIIMLM
EFDKEKAVKMLIDNTDKVPVEEVVRQLNRRSELLHVYLDSLFVKDPQAGMDYHELQIPLY
AEFERSKLLTFLRNSNYYPLQKALNECEQRRLVPEMVFLLSRMGNNKQALQLIIQEENDV
EKAIEFAKEQDDEDLWDDLINYSLDKPEFITGLLHNIGTHVDPIKLIKRIPEGMKIPGLR
DSLVKILQDFNLQISLREGCKKILVKDSVSLLQRLSKVQQRGVSVDDETKCPVCQGAVIA
EDTKRTSHVVVFFCKHVYHEDCLPARDVGPFCQICTAHSQVKRLRSRHVQRNEARP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacagagcgaaatgagtttgaactgagattgaaatccggcataaacgac
ccggaagccgaagaagatgatgacaacgaagaagatgaagatgatgatgatgatgatgaa
gaagaggggtctgaagaagatgaggacgaggtggaacccaagttgaaatacgaaagaatt
ggaaatgctatgaatactattctgaatggagaagagtgcgcaagttgtatggcagtccac
acgaagtttcttgcccttggaactcactatggagttgttcatatactggaccatcaagga
aacccaagcagtagtaaaaaatatccatcacacactacagctatcaatcaaatcagcatt
gatcagagtggagactatgttgccagctgctctgatgatggacgagttgtaataaatggc
ctttatagctctgaaaacaatgtccaggccagctttgacactcctgttaagtcagtagct
ttggatcctgagttctccaagaaaagaaccaaaatgtatgttacaggaggaacaaagttg
attttgacagagagaggctggttcagaaacaagtcaagtatcttacatgaaggagaagga
aacattagaacaataaaatggaaagcatcccttatagcatgggctgatgacacagaggtc
aaggtgtttgacatgaattctcacagagtaataactcatataaagagagaaaccagaaat
tatagacctgagttatatcgctgctgtctgtgttggagggatgatgtcactcttttaatt
ggctgggcagacatggttcagatttgtgtggttaaagaaaggctggttccaaggtcagat
ctccctcctttggttgtggaaatagttgcaaggttcaaaactgactattacatttctgga
attgcatatcttaaagatgacttgtgttgtaattttggttttttctttacagaaaatgtt
gtggaagagaatctgttttacattgttagccctaaagatcttgtcctggctaagcccaga
aatattgatgatcacattaaatggctcatggatcatggaaagtatgaggaagctctgagt
gtatctgaaacaaacagtaaagaagtcaagaaacataatcatcaagatattggaagagct
tttttgaaatctttgatggaggaaggaaaatatgagacagctgccagattgtgcatcaaa
gtattaagtgatgacaagaaactctgggaagatgaagtgtacaaatttgctagaaaacat
cagctggaggctatcgccccttatattcctaccaaagcagtgaagctgagctcagcaatt
tatgaaatggttctgtatgacttcctcaagaaagatgtcaagaaattccaggcactgatc
aaggaatggccagcagatttatacaatatgaagcccatcattaatgctatacaggatcag
ctggataaggaccctaagaaccgtgttcttttggaaactcttggagaactttacacgcgg
ctgaagagatatgataaagggctcgccatataccttaaacttggacatagcgatgtgttt
aacttgatccatcaacacaacttgtttagctctattcaggacaagattattatgctcatg
gaatttgacaaagagaaagccgtgaagatgttgattgataatacagacaaagttcctgtt
gaagaggttgtgcgccaactgaacaggcgatcagaacttcttcatgtgtatcttgactcg
ctcttcgtgaaagatccacaagccgggatggattatcacgaactacagattcctctttat
gcagaatttgagcgatcaaaattgcttacttttctgagaaacagcaattattatcctctg
caaaaggctctaaacgaatgtgaacagaggcgcttggttccggagatggtttttttgctc
agtcgcatgggaaacaacaagcaagctttgcagttgataattcaggaagaaaatgatgta
gagaaggcaattgaattcgccaaagaacaagacgacgaagatttatgggatgatctgatc
aattattctcttgacaaaccagagtttatcacggggctcttgcataatatcgggactcat
gttgatccgatcaaactcataaagaggattcctgagggaatgaagattcctggtttgaga
gattcattggtgaaaattcttcaagacttcaatttgcagatctctcttcgtgaaggttgc
aaaaagattctcgtcaaagacagcgtgtctttgctacaaaggttgagcaaggttcagcaa
aggggagtgtcagttgacgatgaaacaaagtgtcccgtttgtcaaggagcagttattgct
gaagatacaaaacgaacctcacatgttgtggtgtttttctgtaaacatgtttatcatgaa
gattgtttaccagctcgtgacgtgggtccgttttgccagatttgcacagcgcatagccaa
gtgaagagactgcgttcccgtcacgtgcagagaaatgaagcaaggccttga
DBGET
integrated database retrieval system
