Pocillopora damicornis (lace coral): 113676110
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Entry
113676110 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113676110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113676110
Membrane trafficking [BR:
pdam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113676110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
TPR_VPS8_2
zf_RING_Vps8
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_NWD2_C
Beta-prop_HPS5
zf-RING_2
zf-RING_5
zf_RING_Vps8_fungal
WD40_2
EIF3I
zf-RING_11
PHD_NSD
WDR55
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113676110
NCBI-ProteinID:
XP_027048530
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MPSLESILNEKDEDIISLEDDPDLANILENQALSSSLDLDLGSGNKVKKTKHGSVLRHVV
LKSVSSQMVSASARVDAGLPTAMAVSSLICIGTSHGVVLVFDPQQTLKLVLGNTSLGAEY
GAVTALGINMECTRLLCGHARGQITMWDLQSGKLLRQIADAHPMGSAVLHVMFTDDPTVA
ICSDSGGSVFVLSFKHIIVMFVFFFSCYSRGEVCMMAPLHLHEGMKEHPLYEQSLLALAT
LTKVLVLTLKPELEVLFTHTLKGPADSLPLLAWQFAIIQVESRKVIDPVLAFGRGTEIFF
YQAHSQGEKQVRFMFLQRFESSYKLTALHWLNPQVIATVDALERVHVIDVRSMEELEVLD
LSSVQLVYSSSYFKSLSTGGNVSKALVAASEHSCYQTVVVFNGQQLLLGVKSVHVLTLRN
WRDRIEVFVKQNNFLDALELALSFYDGTAMAVIGLIGNKEQRSTEIAAQIEELLLAYVDI
TVFVNCPKTRDTKELRDYFKEMVPIFIKYSLAIKNMDLLFREIYDKFCEDPVGKIVFLES
LEPHILADKLTSLSPIVMKEFIEHYNQQNKLKDVESCLMHLDVTNLDIHQMVKLCWAHGL
YDAIFYVYNRGMRDYTTPLEELINVLKGTVQARTPFEDSDLSLGNKLLVYISCCLAGQAF
PVGSIPEDYALDVKKEVFNCITTQNTKDGFESEPSYPRLRVLLHFDTQEFLNVLSMAFER
KDFDDNFDGPSGVTRRQYLVNILLDVMVQDTGFTPSQVGSLFTFLARQMAKHENRIQVNK
VLFEQVLEYLANPDDDSRHEERQQALLELWNAGGLKQFDDARILVLAENAKFYRVCEMLY
ERKRQFSKVLSCYFRDSYREHQVFTYVHCVMSEDVYTDLEREELKEATLNSLQSFLSIDC
GKTAQMILTEFPDILTSVIRQLEGQSTVQYEFLKGVFENKSQTPSRPEDTPDAEVHEKYI
ELMCRYQPDLVHSYLRNTENYRLEETLAIVRQFNNTYATSYLLEKAGDIHGAFQLLLETL
KVKVKVLCDVFEENESPSLNEIRKLTTNIEAVLLGVLIPLCQRNSGRLEETDREALWFPL
LETVMAPQRKCKDTTSAYFLAFKDQTRHVLNSMMGYISLPAILQKIMQDPTYSTGKFGEI
KELILGMLDTYTYESTLLKTTNKLLSGDLHSSLSHLKNQSNHGMTPKSSRCCICHRLYTD
DTASGQRDDLLIYRCGHVYHSECMAGTTGTEGNWICMLCNKTGLSRLSSWKGKRVLGNSV
KPLSPGSVQKFKTESSGAAKKEDLSKTERSVPSLTQQQFEAVSRLKAQNKGVSRLAILSE
LSRSSDAISHTYGSRSTSSGNIFEDERFRLHLAPPRD
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgccatccttagaaagtatcctgaatgagaaagatgaagacatcatttcattagaagat
gaccctgatcttgccaacatccttgagaaccaagcactgtcttcttctcttgacttggat
cttggttcaggaaataaagtaaagaaaactaaacatggctctgttttgcgacatgttgtg
ttgaaaagtgtttccagtcagatggtttctgcatcagccagagtggatgctggtttgcca
acagccatggctgtttcttctcttatttgtattggaacatctcacggagtggtgctggtt
tttgatcctcaacaaacacttaagctggttctggggaacacatcccttggtgcagagtat
ggggctgttactgcactcggcatcaatatggaatgtacaagacttctatgtggacatgca
agaggccagataactatgtgggatttgcagtctgggaaattgttgagacaaattgctgat
gcccatcccatgggtagtgcagtgctgcatgttatgttcacagatgacccaacagttgca
atttgcagtgacagtggcggttctgtgtttgttctcagcttcaagcatattattgtcatg
tttgttttctttttttcgtgttatagccgcggtgaagtgtgtatgatggcacctcttcat
ttgcatgaaggaatgaaagagcatcctctttatgaacagtcgttattagctttggccact
cttactaaggttctggtattaacactgaagcctgagctcgaggtcctctttactcacact
ctaaagggccctgctgattctttgccgctgttggcctggcagtttgccataattcaagtg
gagtccagaaaagtcattgatccggttcttgcatttgggaggggaactgaaattttcttt
tatcaggcccattctcaaggggaaaagcaagtcagatttatgttcctacaaagatttgag
agttcgtataagctcactgctcttcattggctgaacccacaagtaatcgctacagtagac
gcgctggagagagtccatgtcattgatgtgcgaagtatggaagaacttgaggttcttgac
cttagctcagtacagcttgtgtacagcagcagttatttcaagtcactctctactggagga
aacgtcagcaaggctttggtagccgccagtgaacattcatgttatcagacagtagtggta
tttaatggacaacaattactcctgggtgtcaagtccgtccatgtattgacactaaggaac
tggcgcgataggattgaagttttcgtgaagcaaaataacttcctggacgctctagaactg
gcactgtctttttatgatggcactgccatggctgtgatcggtttaattggaaataaagag
cagagatcaacagaaattgctgcacagatagaggaactattactagcttatgttgatata
acagtgttcgtaaattgcccaaagaccagagacactaaggagctgagagattacttcaag
gaaatggtaccaatctttatcaagtatagcctggccatcaaaaacatggatctcttattc
agagagatttatgacaagttctgtgaagatcctgttggaaaaatcgtgtttctggaaagc
ttggaacctcatatcttagcagacaaactaacgtctttgagtccgattgtgatgaaggag
tttatagagcactataaccagcaaaacaagctcaaagatgtagaatcatgtctcatgcac
ctagatgtgacaaatctggatatacatcaaatggtgaaactctgctgggctcacggcctg
tacgatgccattttctatgtgtacaacagaggcatgcgagactacactactccactggag
gagctgattaatgtcttaaagggcacagtgcaggccagaactccatttgaagattcagat
ctttctttggggaacaaattacttgtatacatcagctgctgcctggctggacaggcattc
ccagtgggttccatccctgaggactatgcattagacgtaaaaaaagaggtgttcaactgc
atcacgacccaaaatactaaagacggttttgaaagtgaaccttcatatccacgtttgcga
gttttgttacattttgatacccaagagttcttgaatgttctttccatggcgtttgaacgg
aaagattttgacgacaattttgacggtccatctggtgtcacgcgaagacaataccttgtg
aatatccttcttgacgtaatggtgcaagacactggctttacgccaagccaagttggatcg
ctgtttacgtttctagcgcggcaaatggcaaagcacgagaacagaatacaggtcaacaag
gtgctatttgaacaggtcttagagtatcttgctaaccccgacgatgactccagacacgag
gaaagacaacaggccttgttagagctttggaatgctggtggcctgaaacaatttgatgac
gcccgcatactggttcttgcggaaaatgctaagttctatcgcgtttgtgaaatgttgtac
gagagaaaacggcaattctccaaagtgttatcctgttacttcagggattcctatcgagag
caccaggttttcacttacgttcattgtgtgatgtcagaagacgtgtatactgatctggag
agagaggagctgaaggaagccacactcaatagtttgcagagctttctttcaatcgactgc
ggaaaaactgctcaaatgattctcactgaatttccggatatcttgacttccgttatccgt
cagctagagggacaatcgacagtgcagtatgaatttctaaaaggcgtgtttgagaataaa
tcccagacccctagccgcccagaggacacacctgacgctgaagtccacgaaaaatacatc
gagctgatgtgtagataccagccagatctggtgcacagttatttaagaaatactgaaaac
tacagacttgaagaaactttggcgattgttcgccaatttaacaacacatatgctacatcc
tatctactggagaaggctggcgatattcatggagctttccagcttcttttagagacttta
aaggtgaaagtaaaagttctttgtgatgtttttgaggaaaacgaatcaccatctttgaac
gaaatcaggaagcttactacaaacattgaggctgttttactaggagttttaattcctctg
tgccaaagaaattctgggagacttgaagaaacggacagagaggctttatggtttcctctt
ctcgaaaccgtcatggcccctcaacggaaatgtaaagatacaactagtgcatatttttta
gcttttaaagatcagacaagacacgttttaaacagcatgatgggctatatatcgttaccg
gccattttacagaagattatgcaggatccgacttacagtactggtaaatttggtgaaatt
aaggaacttattttaggaatgttagacacttacacatatgaatcgactcttttaaaaaca
accaacaaattactctctggggatcttcactcctctctcagccatcttaaaaatcagagt
aaccatggaatgacacccaagtcgtcaaggtgttgtatctgtcataggctctatactgat
gatactgcaagtggtcaacgggatgatcttttgatatacaggtgtggccacgtatatcat
tcagaatgtatggcagggactactggaactgagggaaattggatctgtatgctctgtaat
aaaactgggctttcgcgtctttcttcgtggaaaggcaagagagttctggggaactcagtg
aagccattgtcacccggatctgtgcagaagttcaaaacagaaagttctggagcggcaaag
aaggaggatctctccaagactgaaagatcagtgccttcacttacgcagcaacaattcgag
gcagtgtctaggctgaaggcacaaaacaaaggtgtatcgcggttggccattttatcagag
ttatcaaggtcaagtgatgctattagtcatacttacggcagtcgatcgactagctcaggc
aatatctttgaagacgaacgcttcagactgcatcttgccccgccacgagattag
DBGET
integrated database retrieval system
