Pocillopora damicornis (lace coral): 113676327
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Entry
113676327 CDS
T05773
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113676327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113676327
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113676327
mRNA degradation factors
5'-3' decay
Lsm complex
113676327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
113676327
NCBI-ProteinID:
XP_027048775
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MSFLPGTASLIKEIDKRLLVVLRDGRTLIGYLRSIDQFANLLLQDTIERIHVGGKYGDIP
RGIFLVRGENMVLAGEIDEEKEAQSELEEVSVPDILELQRDEQLAKEEQERVKTKAKLKR
GLPVNVSDTYLNHDDVFN
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccttcctgggacagcaagtctcatcaaagaaatagataaaagacttttggtt
gtgctgagggatggaagaacactcattggatatttgaggtccatagatcaatttgccaac
cttttacttcaagacaccattgaaagaattcatgttggaggaaagtatggggatattcct
agaggcatatttcttgtaagaggagaaaacatggttctagctggagaaatagatgaagaa
aaagaagctcagtctgaactggaggaagtgtcagtacctgatattcttgaattacaaaga
gatgagcaactggctaaagaagagcaagaaagagtgaaaacaaaagccaaactgaaaaga
ggcctgcctgtcaatgtatctgatacatacctcaatcatgacgatgttttcaactga
DBGET
integrated database retrieval system
