Pocillopora damicornis (lace coral): 113676435
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Entry
113676435 CDS
T05773
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113676435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113676435
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113676435
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113676435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
113676435
NCBI-ProteinID:
XP_027048895
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAHHRPLGDPLSGISQYPFPPRKGQQDLSPGGRKNMPAIGSLRKKLPVFNDDGDDDYGSG
GMYFNPSMFPPHRPEKEPHLGGLYGTPSGMQSPGPHQSNFYGSGLPSSGLPPNVNSMQVP
PSAPRGMSSAQFGRSLSHPGPTHSTTSLSGSVTTPGVPSIPSSLHNMVGSQGGNMSSQSA
SRGILSMGPRGVMGQMPPGPGHLGNQGGLNNLPKTSRTISIPSSLSSSSSRSSPVLAIGM
NAPQTPQQTHQQRGFNLGGISSGASSSVSGPMSSFGLTRSQSTSGVTQGMGGSGLPLFSG
AFQPPGAPDSPKSLRHIFSGAGQGLADATPGGSGGLDLSEFPALANRSRLESLSRVEGVP
RLDSIGGVSAPPSSLPNRPSYGVVSKPAEPPPDFSIHNEDFPALPGSNTFKSESQTDSSV
PQDPSKPSVITASSSIFPGTDLRGGSSYEQALKDVAKDARFATAEAKANSTNHKQPPRGI
QTSPSGMISNIPKGMVTDQFGMIGLLTFIRAAETEPNLVTLALGSDLTTLGLNLNSPESL
YHTFGSPFADSPCRPHEIDYHVPSEYRINSFIRDKLAPIKLSRYTEDLLFYLYYTNGGDI
LQLAAAAELYARDWRYHKDERLWLTRAPGVDPQVKTNSYERGTYYFFDCSTWRKVAKEFH
LEYDKLDDKPTLQSVTAQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccatcgccctttgggtgatccactttctggaataagccagtatccatttcct
ccgaggaaaggtcaacaggatctctccccaggtggtaggaaaaacatgccagctattggc
tccctgaggaaaaagttgcctgtttttaatgatgatggggatgatgattatggatcaggt
ggaatgtacttcaatccttcaatgtttcctccacacagaccagagaaggagcctcatctt
gggggtctttatggaacgccttctggtatgcaatcacctggaccccaccaatctaatttt
tatggttcagggctcccaagctcaggacttcctccaaatgtcaattccatgcaggttcca
ccaagtgctccaagaggaatgtcatctgctcagtttggtagaagcttgtcacatcctgga
cccacccactctacaacatcactcagtggaagtgtaaccactccaggtgttcccagcatt
ccatccagtcttcacaacatggttgggtcacagggagggaatatgtcatcacagtcagca
agtagagggatcctgtctatgggtcctcgaggagtgatggggcaaatgccacctggtcct
ggtcacttgggcaaccagggtgggcttaataatttgccaaagacaagtagaacaatctcc
ataccatcatcattatcaagcagctcctcaagaagttcaccagtactagcaattggaatg
aatgcaccccagacacctcaacaaacacatcaacagagaggctttaaccttgggggtatc
agtagtggtgctagcagctctgtttctggtcccatgtccagttttggtctcacaagaagc
caatcaactagtggagtgacacagggtatgggtggttctggacttcctcttttttcaggg
gcatttcaacctcctggtgcacctgattcaccaaaatctcttcggcacatattctcagga
gctggtcaaggactcgccgacgcgacaccaggtggttcgggtgggttagacctgtcagag
ttcccggcactagcaaacagaagccgattggagagtctcagccgtgtggagggtgtgcca
cgtttggacagtatagggggtgttagtgcacctcctagcagcttacccaataggccaagt
tacggtgtagtgtctaaacctgctgaacctccaccggatttttcaattcataatgaggac
tttcctgctctccctggttcaaatacctttaagtcagaaagccaaacggacagttctgtt
cctcaggatccttccaagccatcagttatcaccgcaagctcaagcattttccctggaaca
gatcttagaggcggatcgtcgtatgaacaagcgttgaaagatgttgcaaaagacgccaga
ttcgcgacagcagaggcaaaggcgaattcgacaaatcacaagcaaccaccaagaggaatt
cagacatctccttcaggtatgatctcaaacattccaaaaggaatggtaacggatcaattt
ggaatgataggattgttaacattcattagagctgcagaaacagaaccaaatcttgtgacg
ttagcgctcgggagtgacctcacgacgttaggccttaacttaaattcaccagagagtctt
tatcatacgtttggttcaccgtttgcggacagtccgtgtagaccacatgaaatagactat
catgtgccctcggagtaccggataaactcatttatcagggacaagcttgcacccattaaa
ctcagtcggtatacggaggatttgctcttctatctctattacacgaatggaggagatatt
ctccaacttgcagccgcagctgaactgtatgcacgtgattggcgttaccacaaagacgaa
agactatggttgacacgtgctcctggtgttgatcctcaagtaaaaacgaattcatacgaa
cgaggaacatactacttctttgactgtagtacgtggaggaaggttgcgaaggaattccat
ttggaatacgacaagctagacgacaaacctacactgcagtctgtaacagcacaatga
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