Pocillopora damicornis (lace coral): 113676471
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Entry
113676471 CDS
T05773
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04120
Ubiquitin mediated proteolysis
pdam04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113676471
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113676471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113676471
03036 Chromosome and associated proteins [BR:
pdam03036
]
113676471
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113676471
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113676471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
F-box
WD40_like
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WD40_RFWD3
DUF4508
DUF6188
SAS4
F-box_5
Motif
Other DBs
NCBI-GeneID:
113676471
NCBI-ProteinID:
XP_027048931
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MEDEMIDYGFEEDSVMVIDGEDEKSSEKESERSRELFIEQSQACAKHFEKWSETQQVEFV
EFLLSKMCHYQHGHINSYLKPMLQRDFITALPAKGLDHIAEKILSYLDAESLCAAERVCK
EWYRVISDGMLWKKLIEKKVRTDPLWRGLSERRGWDKYLFKAQVPELPDNASFRRLYPKV
IEELETIDTNWRCGRHVLHRILCHSENSKGVYCLQYDDQKIVSGLRDNTIKIWDKNKLEC
VKVLTGHTGSVLCLQYDENVIVTGSSDSTVRVWNVLTGEMLNTLIHHCEAVLHLRFQEGM
MVTCSKDRSIAVWDMQSPTDINLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTST
CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD
NKRIVSGAYDGKIKVWDLQAALDPRAPAGTLCLRTLVEHNGRVFRLQFDDFQIVSSSHDD
TILMWDFLNYTPDQNGKAAVSPSR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgattgattacggcttcgaggaagatagtgtgatggttatcgatggc
gaagacgaaaaatcaagcgagaaggaaagcgagagaagccgagaacttttcattgaacaa
agtcaagcttgtgctaagcattttgagaaatggtcagaaacccaacaagtcgaattcgtt
gaatttttactttcgaaaatgtgccattatcaacatggacacataaattcgtatctgaag
ccaatgctacagagagattttataaccgctctgcctgctaaaggtttggaccatatagca
gaaaagattttgtcctacttggatgcagagtccttgtgtgctgcagaaagggtttgcaag
gagtggtatagagtaatttcagatggtatgctatggaaaaagctcatcgaaaagaaagtt
cgaactgatcctttgtggagaggattgtcagaaagaaggggatgggacaagtatttattc
aaagcccaagtacccgagctacctgacaatgcttcctttagaagactgtatccaaaagtt
attgaagaacttgagacaattgacacaaattggcgttgtggtcgtcatgttcttcaccgt
attctgtgccacagtgagaatagcaaaggtgtctactgtctgcagtatgatgaccagaaa
atagttagtggacttcgggataatacaattaagatatgggacaaaaacaaattagaatgt
gtcaaagttctcacaggccacactggttctgtactgtgtcttcagtatgatgagaatgtt
atagtcacaggatcaagtgattccacagtaagggtatggaatgttcttactggagaaatg
ttgaacaccttaatccatcactgtgaagctgtgcttcatcttcgattccaagaaggcatg
atggtgacctgttcaaaggatcgctccattgctgtgtgggatatgcagtcccctactgac
ataaacctgagaagagttttggttggtcacagagcagctgtgaatgtggtggactttgat
gataagtacattgtgtctgcatctggagatagaacaataaaggtatggagcacctccact
tgtgaatttgtgagaaccttgaatggacataaacgtggcatagcatgtctgcaatatcgt
gatcgtttggttgttagtgggtcttcagataatactataagattatgggacattgaatgt
ggagcctgtcttagagtcttggagggccacgaggaattagtcaggtgtatccggtttgac
aacaaaaggatagtcagtggagcttatgatgggaaaatcaaagtttgggatcttcaggct
gctttagatccaagggctccagctggaacactctgtctcagaactcttgtggagcataat
ggcagagtattcagacttcagtttgatgatttccagatagttagcagttcccatgatgat
acgatactcatgtgggatttccttaattacactccagaccaaaatggaaaagcagccgtt
agcccttcaagataa
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