Pocillopora damicornis (lace coral): 113676862
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Entry
113676862 CDS
T05773
Name
(RefSeq) transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113676862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113676862
03036 Chromosome and associated proteins [BR:
pdam03036
]
113676862
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113676862
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113676862
Chromatin remodeling factors
BAF complex
113676862
PBAF complex
113676862
GBAF(ncBAF) complex
113676862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
113676862
NCBI-ProteinID:
XP_027049393
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MASLAGFQYTPENMQRLEKALQTMQDRGMESDPRYAQLMSLLRAKPTSVDMSDAGHGLQL
PPPSMPMGIGNIPPGTGMGGDMQTRSSPAPNLMSQASQKAHGFSSPQLLQLRAQIMAYKL
LARNQPLPEHIRIAIQGKSPSVKPAGSSMPSSTVPPQSSQLPSRTQNQPGNQSAPQSQAN
IGAGSSTTSPAGPVPNQTAYNVPGMTAAQQLQSKQAVGTSQSTTPASWEAAKGAAASAIA
AATQQHKLKEQQRQALAQQQQQQQQQQQQQQQRKAQTPGTSQGGIQMPSKPRLAPVAKPV
GLDPVTILKERENRIQARIVQRIRDLEGLPGSIPDDLRMKAMIELRALRLLNFQKQLRAE
VVACTRRDTTLETALNSKAYKRSKKQSLREARITEKLEKQQKMEQERKRRQKHQEYLNTI
LQHARDFREYHRSIQSKVVKLNRAVMSYHSITDREKKKEEERIEKERMRRLMAEDEEGYR
KLIDQKKDKRLAYLLGQTDEYVASLTKMVQQHKREQRKKQLKENRKRRKSDYDDDETPEG
NRHVPVVDTETGLVLKGEDAPIADNLDSWLESHPGYQVAPRQEQESDDEEEEEGSVEDAE
GDDEVEKEADEKKTEKEKKREEYGKDEEDVVEEADDPTVLESRQYYQIAHSFQEDITEQP
TILIGGKLKEYQMRGLEWLVSLHNNALNGILADEMGLGKTIQTIALFAYLIEVKKLNGPF
LVIVPLSTLSNWLLEFEKWTPSIIVVSYKGSPNMRRSAASQIRGGKFNVVLTTYEYVMKD
KSVLSKVRWRYMVVDEGHRMKNHHCKLTQILNTHYAAPHRVLLTGTPLQNRLPELWALLN
FLLPTIFKSCSTFEQWFNAPFAMTGEKVELNGEETLLIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVVKCDMSSLQRILYNHMHKAGVLLTDGSEKDKKGRGGTKTLMNTIMQLRKIC
NHPFLFQHIEESMAEHLGFPSGIVQGPDVVRVSGKFDLLDRILPKLKRKNHRVLLFSQMT
QLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLLSLFNAKDSPYFIFLLSTRAGGLGLNLQ
AADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEEKILAAARYKLNVDE
KVIQAGMFNQNSTSSERRAFLMAILDTENDEDETSLVGNQISGLQRQTEEESEVPDDETI
NQMIARTEEEFELYQRMDMERRRQEVREAGSLRRRPRLMQTNELPRWIVKDDAEVERLTW
EEESEKIFGRGSRVRKDVVYCEHLTERQWLKAIEDGRLDEVEEKQKVKKLSKKRKHDPGE
EGDVPKVKKKRGRPPAVKLAPNPPELTKQMKKLMKYIVRYVDDSTSRNLAEIFMVLPTRK
ELPDYYQIIKQPVDIRKIRERINSHKYRTLDDLEEDFSLMCKNAQTYNIEGSIIYEDSIK
LQSIFTHARQKIQGGEDLQLAHSSAAEPEVESEKEASEGEEDDDINDSDGEEAESVGSDI
EGGNSQSSLKMRIKLGKQSVEKAKVDLGGVKKKRRGRPPRINPPPIRQEPSDNELESYPP
SEKGYSSEGEGSDREDYPGSSQEMAASPSQKKRS
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttagcaggatttcagtacactccggagaacatgcaaaggctggaaaaggca
ttgcaaactatgcaagatagaggaatggagtcagatccacgctatgcgcagttgatgtca
ttgcttagagcaaaacctacatctgttgacatgtcagatgctggccatggccttcaactt
cctcctccttcaatgccgatgggtataggaaatataccaccagggactggaatgggagga
gacatgcaaacaagaagttctccagctccaaatttaatgtctcaagcctcgcagaaagct
catggtttctcttctccacagttgttacagctcagagcacagatcatggcttacaaactc
ttagctcgtaatcagcctcttcctgaacacatacgtattgccattcaaggcaagtcaccg
tctgttaaaccagcagggtcaagtatgcccagtagtacagttccacctcagtcaagtcag
ttaccttctaggactcagaatcaacctggaaatcagtcagcacctcaaagtcaggcaaat
attggtgctggaagctctacaacatctcctgctggtcctgtgcctaatcagacagcttat
aatgtccctggaatgacagctgctcaacagctacagagcaaacaagcggtaggaaccagc
caatcaacaacacctgcatcatgggaggcagccaaaggtgcagctgccagtgctattgca
gcagcaactcagcagcataaactcaaagaacagcaacggcaagcactcgcacagcaacag
caacagcagcagcaacaacaacagcagcagcagcagcgcaaggcacagaccccaggaaca
tctcaaggagggatacagatgcctagtaagcctcgcttggcaccagtggctaaacctgtt
ggacttgatcctgttactatcctgaaagaaagagaaaacagaatacaggcccgtattgta
cagcgcatcagggatctggaaggtctaccagggagtattcctgatgatctgagaatgaaa
gcaatgattgaattgagagcactcaggctgcttaacttccagaaacagttaagagcagaa
gttgtggcctgcacaagaagagacactacactggagacagctcttaattcaaaggcatac
aaacgaagtaaaaaacaatccctacgtgaggcaaggattacagagaaacttgaaaagcag
cagaagatggaacaagaacgcaaacgtagacaaaagcatcaggagtacctgaacacaata
ttgcagcatgcccgtgacttcagagaatatcatcgttccatccagtccaaggtggtgaag
cttaacagagctgtgatgagctatcactccattacagacagagagaagaagaaggaagag
gagaggattgagaaagagagaatgaggagacttatggcagaagatgaagaaggctacaga
aaactgattgaccaaaagaaagacaagcgtttagcttatctcctgggacagactgatgag
tatgtagccagtcttacaaagatggtacaacaacacaagagagaacagagaaagaaacag
ttgaaagaaaacaggaaaaggagaaagtctgactatgatgatgatgagacaccagagggt
aacaggcatgtgcctgttgttgatacagagactggtttggtgcttaaaggagaagatgcc
cccatagctgacaatctggactcatggctggaaagtcatccaggatatcaagtggctcct
cgtcaggaacaggaatctgatgatgaagaagaagaagagggatcagttgaggatgctgaa
ggtgatgacgaggttgaaaaagaagcagatgagaagaaaaccgagaaagaaaagaagaga
gaagaatatggcaaagatgaagaagatgttgtggaagaagctgatgatccaactgttctg
gaaagccgtcagtattatcaaattgcacatagctttcaggaggatatcactgagcagcca
actattcttattggtggaaaactcaaagaatatcagatgcgaggtcttgaatggctggtc
tcattgcacaacaatgctttgaatggtatccttgcagatgagatgggtcttggaaagact
attcagacaattgccttgtttgcctaccttattgaagtcaaaaagctcaatggaccattc
cttgttattgttcctctctcgacactctcaaactggttgttggaatttgagaaatggaca
ccttcaattattgttgtaagctacaagggttcacccaacatgcgtcgttcagctgcatct
caaatcaggggaggaaagttcaatgttgtacttactacttatgagtatgtgatgaaagac
aagtcagtcctctcaaaggtgcgctggcgatatatggtggtggatgagggccacagaatg
aagaatcatcactgtaaattgacacagatcctaaacacacattatgctgcacctcacaga
gtgctgttaactgggacccccttacagaatcgtctgccagagctgtgggcactattgaac
ttcttgcttccaacaatcttcaagtcttgcagcacttttgaacaatggttcaatgcacct
tttgcaatgactggtgaaaaggttgaacttaatggggaagaaacccttttgattattcgc
cgtttgcataaggttttgaggccattcttgttgcgtcgtctcaagaaggaagtagaatca
cagctaccagaaaaggtggaatatgttgtcaaatgtgacatgtcatcacttcagcgtatt
ctttataaccatatgcacaaggcaggagtactgttaacagatggatcagagaaggacaaa
aagggccgaggaggaaccaagactctgatgaacactatcatgcagctaagaaagatttgt
aatcaccctttcctctttcagcatattgaggaatccatggcagaacatcttggctttcca
agtggaattgtgcaaggccctgatgttgtaagagtgtctggcaagtttgatcttctggac
agaattttgccaaagctcaaaaggaaaaaccacagggtgttgttgttttcccaaatgacc
cagctgatgacaattcttgaggattatttcaattggaaaggattcccttacctccgcttg
gacggtacaactaaaagcgaggacagaggtcagctgctgtccctgtttaatgccaaggac
tcaccttacttcattttcttgctgagtacacgggcaggaggactggggctgaacttgcaa
gctgctgacacagtggtgatttttgacagtgactggaacccacaccaggatctccaagct
caggatcgtgctcatcgtattggccagaagaatgaagttcgtgttctgaggctcatgaca
gtgaacagtgttgaagagaagatccttgctgccgcaagatataagcttaatgttgatgaa
aaggttattcaagctggcatgtttaatcagaactccacatcaagtgaacgaagagctttt
ctgatggccattctcgacacagagaatgacgaggatgagacttcattggtaggcaaccaa
atcagcgggctgcaaagacaaacagaagaggaaagtgaggtgcctgatgatgaaaccatc
aatcaaatgattgctaggacagaagaagagtttgagttgtatcagcgtatggacatggaa
aggcgaagacaggaagtcagagaagcaggttcacttcgtcgtcgccctcgactgatgcaa
acgaatgagctgcctcgctggattgtcaaagatgacgctgaggtggaacgcttgacttgg
gaggaagaaagcgagaagatttttggacgtgggtcacgtgtccgtaaagatgtcgtttac
tgtgagcatctgacagaaagacagtggctgaaggccatagaagacggaaggctggatgag
gtggaagaaaagcaaaaagtgaagaagttatccaagaaacgaaaacatgatcctggggaa
gaaggagacgtaccaaaggtaaagaagaaacgaggacgcccaccagctgttaaacttgca
cccaatcccccggagctaacaaaacagatgaagaaactgatgaagtacattgtgagatat
gtggatgattccacttctcgcaacctggctgaaatattcatggttctaccaacgcgcaaa
gaactcccagactactatcagataattaagcagcctgtggatatcagaaagattcgggag
agaatcaactcgcacaagtatcgcaccttagatgacctggaagaagatttctctctcatg
tgcaagaatgctcagacgtataacatagagggctctattatctatgaagattccataaag
ctgcagtctattttcacgcatgctcgacaaaagatacagggtggtgaggacttacagctg
gcgcattcatctgctgcggaaccggaagtggaaagtgagaaagaagcaagtgaaggagag
gaagatgacgatattaatgattcggatggtgaagaggcagagtctgttggttcagacatt
gaaggtggaaacagtcaatcatctttgaagatgcgcattaaacttggcaagcagtctgtg
gaaaaagccaaggttgatcttggtggcgttaagaaaaagcgccgaggtcgtccaccccga
attaatccacctccaattcgacaggaaccgagtgacaacgaacttgagtcgtacccacct
tcggagaaaggctatagcagtgaaggagagggttctgatcgcgaagactaccctggctcg
tcacaagagatggctgcttctccttcacagaagaaacgttcataa
DBGET
integrated database retrieval system
