Pocillopora damicornis (lace coral): 113677192
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Entry
113677192 CDS
T05773
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113677192
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113677192
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
Pre-60S particles
Helicases
113677192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
113677192
NCBI-ProteinID:
XP_027049758
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MATTWSEIRPSLSNSVLDIMDKFGFQKMTPVQAATIPLFMSNKDVAVEAVTGSGKTLAFL
IPIVEMLLRREEKLKKHDVGAIIITPTRELAKQIDEVLRTFTKDLIQLKQLLLIGGVDPV
ENMQRFKSDGGHIIIGTPGRLEDLMTRKQEGIDLAAHVQSLEVLVLDEADRLLDLGFEAS
INTILGFLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKYSKSKSEQRTPSTLKN
FYTICESQGKFSRLVSFLKARKTCKNMVFFSTCACVNYFSKALERFLSNVKVLSIHGKMK
SKRHKVFDSFRKLKSGVLICTDVMARGVDIPEVDWVIQFDPPSSASAFVHRCGRTARIGN
QGNALLFLLPAEESYVEFISINQKVPLQSFEIEGEVTDVTPKLRQMAMKDRDVYEKGMKA
FVSFVQFYRKHECSLIFRSNDLELGKLATGFGLLKLPIMPELKDKSVDFEPVDVDVDKLY
YKDKNREKQRKRMLQESSENGFYPTDSKKKKFRKETVPWSKNKERKVKREKRKARREFFK
TQRQKHQFDEDELEDLARDARLVKKLKAGKISEKQVDTQLGNDQEITPNL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgtggagcgaaataaggccaagtctgtctaattcagttttagatatcatg
gacaagtttggcttccaaaagatgacaccagtacaggcagctacaattccactgtttatg
tcaaacaaagatgtagcagtcgaggcggttactggatctggaaaaaccttggcttttttg
attccaattgtagaaatgctcctgcgaagggaagagaagctgaagaaacatgatgttggt
gccatcattatcactccaactagagaacttgcaaaacagattgacgaagtcttaagaaca
tttacaaaggatctcatccagctaaagcagctacttctgatagggggagtggaccctgtg
gaaaatatgcagagattcaaatcagatggaggtcacattattattggcacaccagggaga
ttagaggatttaatgacaagaaagcaagaggggatagatctggctgctcatgttcaatct
ctggaagttcttgtcttagatgaagctgacagattgttggacttgggttttgaagctagc
ataaatactattctgggttttctcccaaagcaaagaagaacaggcctgttttctgcaact
cagacagatgaagtcgaggctctagtgagagccggcttgagaaatcctgttagagtaaca
gttagagagaaatactccaagtctaagtcagaacagaggacaccatccacactaaagaac
ttttacacaatatgtgaaagtcaaggaaagttctcaagattggtgtccttcctcaaggca
aggaagacctgcaagaacatggtatttttcagcacatgtgcttgtgttaactatttttca
aaggctcttgaaaggtttctttcgaatgtgaaagtgctgtctatccatggaaaaatgaag
tcaaaacggcataaagtatttgatagcttcagaaaacttaaaagtggtgttctgatctgc
actgacgtcatggcccgaggagtggacattccagaggtggactgggtcatacagtttgat
cctcccagtagtgcaagtgctttcgttcaccgctgtggaagaacggcaagaattggaaat
caggggaatgctttgttgtttttgcttcctgctgaagaatcttacgtggaatttatatcc
attaaccaaaaggtacctcttcaatctttcgaaatagaaggagaagtgacagacgttaca
cccaagctaagacagatggctatgaaagacagggatgtgtacgaaaaggggatgaaggct
tttgtgtcattcgtacagttctacagaaagcacgagtgtagtttaatttttagatcaaat
gacctggagctcggaaaactcgcaacgggatttggcctcctaaagttgcccatcatgcca
gagcttaaggataagagtgtggattttgagccagtggatgtagatgttgataaactttat
tacaaggacaaaaacagagaaaagcagagaaaaagaatgctgcaggaatcgagcgagaat
ggtttttatccaacggactcgaagaaaaagaaattccgtaaggagaccgtcccgtggtcc
aagaacaaagagagaaaagtcaaaagagagaagcggaaagcacgtagagaattttttaaa
acgcagcgccagaaacatcagtttgatgaagatgaacttgaggatcttgcgcgtgatgcg
cgcttggtgaaaaaactcaaggcgggaaagatcagtgaaaaacaggtggatacgcaatta
ggaaatgaccaagaaatcactcccaatttgtaa
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