Pocillopora damicornis (lace coral): 113677454
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Entry
113677454 CDS
T05773
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113677454
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113677454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
113677454
NCBI-ProteinID:
XP_027050062
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MSCLTYVDSPLSAPYIETELQKSARLCYRRGFSSKGLSLTSDMKPAHHTLFRDQVSTLVD
WFGRWNECEQTIALYTLLKRISTIQAKFLSLILEHTFREDSFEVQMMQRRANDKEFLGNL
IRESKDVAVKQLLIHLPLLNPRNDDARHEYLHLLPKILNHTVEHSVHQEECRQLLSLAVV
HPAFPAHERTYLHHWLSKLDQSLGVQERMQTTNSFVNENSDVLPNTGCENLVRQNYMRGR
MNGWRNQQLVHVDSGIGGSFETPTIQTHLSISSSLRKSRSNSLTPPPPIEIQDSILEDFP
ESCEIENRPGRSQSFPVDPHRLNNSLSPQSSLDSEYDENGCRQRGSSFNEDARPGMKEVG
SWLKNLRLHKYGSLFAQLSYEEMLGLTDEYLETKGVTKGARNKILLSIKKLSERPETLNR
LEKEVLQQGKLQGVLVALKDIIITPIKPFSPPPSENSPCGSYPPTLTGQQPPSTLPPHPE
DLASRITRVLGKACTQILVSRADEEHCNTYLQLLDRVLSLEAFTQTQKQRIQSWKQECQR
LGRQRRPSHENRARGWYNMGHNSGDSIGGNHGPPAGSGAMNKRHRGSPRNTVKNPAGQLR
SNSAETQMHSKPRLVRSHAVVGRTKSLPLKPTQQSSIVLPQQLSADLENIDDGLESLCLS
VTEHALSDSSDPSVNYK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtctgacatatgttgattcaccactgtctgcgccgtatatagaaacggaactt
caaaagagtgctcgtctttgttatagaagaggattttcatcaaagggtttgtccttgacg
agcgacatgaaacctgcacatcacactctttttcgcgaccaagtgagtacacttgtggac
tggtttgggaggtggaacgagtgtgaacagactatagcgttgtatacgcttttgaagcgc
atatccaccattcaagccaagtttctatcgttaattctggaacacacatttagggaggat
tcctttgaagttcagatgatgcaaaggcgagcaaacgacaaagaatttttaggcaatctg
attcgggagagcaaagacgttgcagtaaaacagcttctaatacacctccctcttctcaat
ccacgaaatgatgacgcaagacatgagtaccttcatttacttcccaagatcctaaaccac
actgtggagcactccgtacatcaagaagagtgtcgtcagctcttgtcactggctgtggtg
catccagcctttccagctcatgagcgaacttatcttcatcactggctgagcaaacttgat
caaagccttggagtacaagagaggatgcaaactacaaattcatttgtcaatgaaaattca
gatgtgttacccaatacaggttgtgagaaccttgttagacagaactacatgcgaggtcgc
atgaatggctggcgtaaccaacagcttgttcatgtggactctggaattggcggctcattt
gaaacaccaacaattcaaacacatctttcaatttcatcatcattacgaaagagccgatcc
aattccctcactcctccaccacccattgaaatacaggactccattttggaggatttccca
gaaagttgtgagattgaaaatcgtccgggcaggtcccagtcatttccagtggatcctcat
cgactaaataactctctttcacctcaatcatctttggacagtgagtacgatgaaaatggt
tgccgacagagaggaagtagcttcaatgaagatgctcggccaggcatgaaagaggttggt
tcttggttaaaaaatttaagattgcacaagtatggaagtttgtttgcccagctttcttat
gaagagatgcttggtttaactgatgagtacttggaaactaagggtgtaaccaaaggggcc
aggaacaaaattctactgagtatcaagaaattgtctgaaagacctgaaacactgaatcgt
ttggaaaaggaagtgcttcagcaaggaaaacttcagggagttcttgttgcacttaaagat
ataataattacaccaataaaaccatttagtcctcctccctcggagaactcgccctgtggt
tcatacccacccacattgacaggacagcaacccccatcgactctacctccccacccagaa
gacttagcatcaagaattacaagagtgttgggcaaagcttgtactcagattcttgtatca
agagcagatgaggaacattgtaacacctatcttcaacttttggacagagttctttcgctc
gaggcatttacacagacccaaaaacaaagaattcagtcatggaagcaagaatgtcaaaga
cttggcagacaaagaaggccgtcacatgagaatagggcaagaggatggtacaacatgggc
cacaactcaggggattccataggagggaatcatgggcctcctgcaggttcaggggccatg
aacaagcgtcacaggggctcacctcgtaatactgttaagaaccctgctggtcagcttcga
agcaacagtgctgagacacaaatgcactctaaaccaagactggtgaggtcacatgctgtt
gtgggaagaacaaagtctctgccacttaaaccaacacaacagagcagtattgtcttgcct
cagcaactctctgcagatcttgagaacattgatgatggattagagtccctttgtctcagt
gttactgaacatgccctttctgattcatcagacccatcagtaaattataaatag
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