Pocillopora damicornis (lace coral): 113677475
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Entry
113677475 CDS
T05773
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04120
Ubiquitin mediated proteolysis
pdam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113677475
04120 Ubiquitin mediated proteolysis
113677475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113677475
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113677475
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113677475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-RING_11
zf-RING-like
zf-HC5HC2H
FANCL_C
DUF3530
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
113677475
NCBI-ProteinID:
XP_027050092
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MREVVLTAASLALTGAVVANAYYQKNQFYPSVVYLTKSSPSMAVLYIQAFVLVILFGKMM
RKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVAQFTMLLFLKCFHWLAE
DRIDYMERSPVLTWLFHVRAVLLLMFLGMVDAVLVHVAYNTTMQSGASVQLVFGFEYAIL
LTIVVTIQMKYILHIVDLRSENPWDNKAVYLLYTELITGFIKSVLYICFMIIMIKVHTFP
LFAIRPMYLTLRGFKKCISDVIMSRRAISNMNTLYPDATPEELQQGDNVCIICREEMTTG
CKKLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRPQPPPQPQQPPPPQAPQPPFGFHPMG
VPPPPMGIPPTPGVPPQGLQNAPPVMFPGWPPMGVPPFPPGQQPPVPSQAPAPGVTSATG
SSSPPQPGPSSAQDASQTQMPGFGMPPPFMFPPPFMMPPFMFGDLSMPPNMDFSSLNIEQ
LVAVEGQERQNVEARINMLRTVHALLDAAIVQLNQYTQMVNVQRQPPLNVPQPSTSAGPS
GYGTAEAGPSGLGTTENGPSELGSGGAQSSVLGGTTKTAGTNTFLSAGKSSSPTPGPSAE
SDSSASEYSAAKAAVSTDKDISQTELNSNDENSEIRRRRLERFSSTTNQDSGDKEHEN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagtggttctcactgcagccagcttggcgttaactggggctgttgttgcgaat
gcctactaccaaaagaatcaattttacccttctgtcgtgtacttaactaaatccagtcca
agtatggcggttttgtacattcaagcgttcgtgcttgttattctgttcggtaaaatgatg
cgaaaggtattctttggacagttgcgagcagctgagatggagcatttgatagagagatca
tggtatgcagtcactgaaacctgcttggcatttacagttttccgtgacgactttagtcct
cgatttgttgctcagtttacaatgttgttgtttctaaaatgcttccattggttggcggaa
gacaggattgactacatggaaagaagtcctgtattgacatggttattccatgtccgagca
gttttgcttctcatgtttctggggatggtggatgcagttcttgtgcatgttgcatataat
acaactatgcaaagtggagcatcagtacaacttgtttttggatttgagtatgccattctg
ttaacaatagtagtaaccatccagatgaaatacatcctgcacattgtagaccttcgaagt
gaaaatccatgggataacaaagctgtatatctattgtatactgaattaattacaggtttt
atcaagagtgttctttatatttgttttatgatcatcatgatcaaagtacatacattccca
ctttttgccattagacccatgtacttgacgttacggggattcaagaaatgtattagtgat
gttattatgtctcggcgtgctatttcaaatatgaatacactttatccagatgccacacct
gaagaactccaacaaggggacaatgtatgcattatatgtcgtgaagaaatgaccacaggc
tgtaaaaaattaccatgcaatcacatattccacacaagctgcttacgctcttggtttcaa
aggcagcaaacatgtccaacatgtagaatggatgtactcagacctcagcccccaccacag
cctcagcagccgccacccccacaagctcctcagcccccttttggcttccatcccatgggg
gttcctcctccgcctatgggaattccccctactccaggggtaccaccccaaggtctacaa
aatgctcctccagtcatgtttcctggttggccaccaatgggtgttcctccatttccacca
ggacaacaacctcctgtcccatcacaagcacctgcccctggtgttacttctgctactggt
tctagtagtcctccacaaccaggtccaagttcagctcaggatgccagccaaacacagatg
ccaggatttgggatgcctccaccatttatgtttcctccacctttcatgatgccacctttc
atgtttggtgatctcagcatgcctcccaacatggacttttcatctctaaatattgaacag
ctggtagctgttgaaggtcaggaaagacagaatgtggaagcaagaataaacatgttacgg
actgtacatgccctgctggatgctgccatagtgcagcttaatcaatacactcagatggta
aatgtgcagagacaaccgcccttaaatgttcctcagccgtcgacctcagcgggaccctca
ggatatgggaccgcggaagcaggtccctcgggattaggaacgacagaaaatggtccctcg
gaattggggtcaggaggcgcacaatcttcggtactcggcggaacgacaaagacagcggga
acgaatacattcttatccgctgggaagtcatcttcacctacacctggaccttccgcagag
tctgattcttcagcttctgaatactcggcggcaaaagccgcagtttcaacagataaagac
atttcgcaaacagaactgaactcaaatgacgagaactctgaaataaggcggcgtagactg
gagcgcttttcgagcaccacgaatcaagacagtggtgataaggagcacgagaactga
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