KEGG   Pocillopora damicornis (lace coral): 113677536
Entry
113677536         CDS       T05773                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03020  RNA polymerase
pdam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113677536
  09124 Replication and repair
   03420 Nucleotide excision repair
    113677536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113677536
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113677536
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113677536
Transcription machinery [BR:pdam03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113677536
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113677536
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113677536
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 113677536
NCBI-ProteinID: XP_027050155
LinkDB
Position
Unknown
AA seq 152 aa
MVYYKKKCYSLAGAQKLFTEVEGTCSGKYGFIIAVTTIDNIGVGHIQPGRGFVVYPVKYK
AIVFRPFKGEVLDAVVMQVNKVGLFTEIGPLSCFVSRHSIPSDMDFDPNSNPPCYKTRDE
DNVIQQDDEIRLRIVGTRVDANDIVSSVIPCV
NT seq 459 nt   +upstreamnt  +downstreamnt
atggtatattacaagaagaaatgctatagcctggcaggtgcacagaaattgttcactgag
gtcgaaggaacttgtagcggaaagtatggctttatcatagctgtcaccacaattgacaac
attggagttggtcacatccaaccaggacgtggatttgttgtgtatcctgtcaaatataag
gctattgttttcagaccatttaaaggcgaagttctggatgctgtagtcatgcaagtaaac
aaggttgggttgttcactgagataggacctctttcatgctttgtgtcacgccattcaatc
ccatcagatatggattttgatccaaactctaacccaccatgttataaaacaagagatgag
gacaatgtgattcaacaggatgatgaaattcgtctcagaatagtaggaaccagggttgac
gctaatgatattgtaagttctgtgattccatgtgtttag

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