Pocillopora damicornis (lace coral): 113677943
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Entry
113677943 CDS
T05773
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113677943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113677943
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113677943
Cul7 complex
Target recognizing subunit
113677943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
F-box-like
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_EML
F-box
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
WDR90_beta-prop_4th
WDR54
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
BBS2_Mid
WD40_RFWD3
Beta-prop_WDR75_1st
VPS8_N
Motif
Other DBs
NCBI-GeneID:
113677943
NCBI-ProteinID:
XP_027050604
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MYSAGDNEELKCFRREWMQELSKTKQDIQVHKGNLEKCQNFKQGDIERAFVDFKEEVRHF
HPVGCSTDKSCSVKFPKTTEEKSSVNVNDDIVLLNLPQPQTGEVNNDTPSDSKVQQKLFS
EKLDKRKKSLLDQLIEDIDEITSIPFFDLSLPKEVGLQIFTDLGIKDLCACAQVSKAWKI
LAEDELIWYHVGCKLGYVQKRHSSTIDRENWKSFVRDSILEERELRRNWKERICRLSSLE
FERGGGLCAVSVHGNFICSGYSSGAVVVWEGDAENVSSYRELISSDSVNSQRQRVHVTST
TINQKLCVAGFDNGDVCVWSHNLSSSPLYHFHCHESIKGVSLATSGPLAFVALSDHVLKV
HTSDVNGQWSCVESRNYEKIGNTMFIPNSASHSLPEHVAIATQDTVSILAPGKGLLSTMD
HVIGGKLTCMDCTPDQLAIGVGSYGYGTLGNKVRLYSLETSKMISILGSHYREITCLDLA
NCPPHRLVTGSYDCRVRVFDLRSEKMALSFHLGHKRAVTAVQMDDWKVVSGAEDGTLVVW
DQRMTSTLWTTHARHPVRLCKFQGPRMITANIPLDRTPRDNLWYADDLILHRRHRGVIRT
FDFSASNATKGIPEICSSNYDDTSGYNYNIKLSVPYDSIEM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagccggagataatgaggagttgaaatgtttccgtcgcgaatggatgcaagaa
ctcagcaaaacaaaacaagatatacaagtccacaaggggaatctggaaaaatgtcaaaat
ttcaaacaaggcgacattgagagagcgtttgttgatttcaaagaggaagtacgtcatttt
catcctgtaggatgctccacggataaatcgtgctctgtaaaatttcctaagacgacagaa
gaaaaatcatctgtcaatgtaaatgatgatattgttcttttgaatttaccgcaacctcaa
actggagaggttaacaatgacacaccgagtgactcaaaagtacaacaaaaattgttctct
gaaaaacttgataaaagaaagaagagtcttctagatcaactgatagaagacattgatgaa
attacaagtattcctttctttgatttgagcttacccaaagaagtgggattacagattttc
actgacttgggaatcaaagacctttgtgcttgtgctcaggttagcaaggcctggaaaatt
ctggcagaggatgaactgatatggtaccatgtaggttgtaaactaggttatgttcaaaag
agacactcttccaccatagacagagaaaactggaaaagttttgtacgagatagcatttta
gaggaaagagaattgagaaggaactggaaggaaagaatatgcagattgtccagtttggaa
tttgagagaggtggaggtctctgtgctgtttctgtccatggaaatttcatttgttcagga
tactcaagtggtgcagtcgttgtatgggaaggagatgctgaaaatgtgtcaagttacaga
gaactgatctcatccgattcagtgaattcacaaagacagagagtgcatgtcacatcaact
accatcaaccagaagttgtgtgtagctgggtttgacaatggtgatgtttgtgtatggtcc
cataacttgagttcctcaccgctgtaccattttcactgtcacgaatctattaagggtgtt
tcattggccacaagtggtccactagcatttgtagccctgtcagatcatgtactcaaggta
cataccagtgatgtcaatggacagtggtcatgtgtagaatcaaggaattatgagaagatt
ggcaacaccatgtttatcccaaactctgcttcacactcattacctgaacatgttgccata
gcaactcaagatactgtgtcaatcctggcacctggcaaaggtcttctatcaacaatggat
catgtgattggtggaaagttaacttgcatggactgtactccagatcagcttgcaattggt
gtgggttcatatggatatggaaccctcggaaacaaagtgcgcctttatagtctggaaacc
tcaaaaatgatttccatattgggatctcactatcgcgagatcacttgtcttgatctagcc
aattgccctccacatcgtctcgtgacaggcagctacgattgcagggtacgcgtgtttgac
ctgcgcagtgaaaagatggcgctttcatttcacttgggacacaaaagagctgtaactgcg
gtgcaaatggacgattggaaagtggtcagcggtgcagaggatggaacgttggtggtctgg
gaccagcggatgacgtcaactttatggacgactcatgcgcgacaccctgtgagactctgc
aaatttcaaggtccccggatgatcacggcaaacattccattggatagaacaccacgtgat
aatctttggtatgcagatgatttgattcttcatcgacgtcatcgaggagtcattcgcacg
tttgacttctcggcgagcaatgccacaaagggaatcccggagatttgctcttcaaattat
gacgacaccagtgggtacaactacaatattaaactaagcgtgccatacgacagtatagag
atgtag
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