Pocillopora damicornis (lace coral): 113678020
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Entry
113678020 CDS
T05773
Name
(RefSeq) LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113678020
03036 Chromosome and associated proteins [BR:
pdam03036
]
113678020
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113678020
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
113678020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
HAT_PRP39_N
RRM_7
Suf
HAT_PRP39_C
LSM_int_assoc
TPR_14
RRM_5
HAT_Syf1_CNRKL1_N
Mad3_BUB1_I
DUF1866
Motif
Other DBs
NCBI-GeneID:
113678020
NCBI-ProteinID:
XP_027050693
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
SSIWEGYRELEMDILESLEQIVTEETKESMAEKISSQKERVMSVFKRQLAVPLLGMQATL
REFEDWLEDSVPDAIMIAYEKALAKLEECLPFEDAXXXXXTGKXSAYVEYXAVLPKLYFP
DFISCFQKLXLQNNKLISFYVDRNIIFLYEXLSXFLKXDSTLKISSVVLPVHERAVRNCP
WVSLLWQNYMRALERNKQDGNKVKETLDTALGCGFSGSDDYLQLWHCYCDYMRRRVEDWG
EDSQSVKDLRENFKTATEYLQNYFGNDGDATNLLERYWARIEAFHCNNISECQRLWDNVI
LSRHGREAEFWLEYANLLRSCRDIKKCRKILQRAVQSASDNPEMVIQALLSFEREEGTLE
DWDAAFSKCRVQLLRVNERRQKVAEKEAVRAKAEEEAQAKRKIANAERKATKKMEQKKAK
FEMRKRKANDQPTPGDKTQKMTDNTQDSGEPVAKKPHVENESENLSSTQSTPAGEPSTKI
SHDSTKDPNTVFVSNLLFSVDEERLKQTFSPLGDITEVRLVKNQMGKSKGFAYIEFKNQA
SVQAALSMDRTKVNGRPMFVSPSVDKSKNPTQFKFPTTLDKKTLFVSNLPFEVKESELEN
LFEKYGKVKQIRLVTNRAGKPKGFGYVELEDETGASAAIVALDGSQVGDRQISVAVSNPP
SRKPRQPGADQQQRQKEQPGSRGRARTQLQLIPRALQKTASTAPASSSDNSTVSSEEKTE
AKPGAEVNQGFSNEYFRSLLQKKN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
tcctcaatctgggaaggctatagagagctagaaatggacattttagaatcgctagagcaa
atcgtgacggaagaaaccaaagaaagcatggctgagaagatctcctctcaaaaagaaaga
gtgatgtcagtatttaaaagacagcttgctgttccactgttaggtatgcaggcaacctta
agagagtttgaagactggttagaggactctgttcctgatgcaatcatgattgcctacgag
aaagctttagctaaattagaggaatgtcttccttttgaggatgcnnnnnnnnnnnnnnga
acgggaaaatgatctgcctatgttgaatactaggctgtgttgcctaagctatattttcct
gattttatttcatgtttccagaaactctaactgcaaaacaataagttaattagtttttac
gttgatcgtaacatcatttttttgtacgagtgactaagttaatttcttaaataggattca
acattgaagatatcatcagtggtacttccagtgcatgagcgtgctgtcagaaactgtccc
tgggtgtctcttctctggcagaattacatgcgagcactggaacgcaacaaacaggacggc
aataaagtgaaagaaactctagacacagctctgggatgcggtttttctggcagtgacgat
tacctccagctttggcattgttactgtgattacatgagaagaagagtggaggactgggga
gaagatagtcagagtgtcaaagacctcagggagaattttaaaactgcaacagaatatttg
cagaactattttggcaatgacggtgatgctacgaatctcttagagagatactgggcaaga
attgaggcatttcactgtaataatatatcagaatgtcagagactttgggacaatgtgata
ctctccaggcatggacgagaagctgagttctggctcgagtatgcgaaccttttaaggtct
tgtcgtgacatcaaaaagtgtcgtaaaattctgcagcgggctgtgcagtcagccagtgat
aaccctgaaatggtgattcaagccttgctcagttttgaacgagaagaagggacgttggag
gactgggatgcagctttttcaaagtgtcgagtacaactattgagagtcaacgaacgaaga
cagaaggttgctgaaaaagaggctgtacgtgcaaaagctgaagaggaagcccaagcgaag
agaaaaattgcgaatgcagagagaaaagcaactaagaaaatggaacagaaaaaggccaag
tttgaaatgaggaagagaaaggccaatgaccaacctactcctggagacaaaactcagaaa
atgaccgataatacacaagattcgggagaaccagtggctaaaaagccccacgttgagaat
gaaagtgaaaatctctcgtcaactcaatcgacgccagcaggagaaccatccacgaaaatt
tctcatgacagcacaaaggatccgaatacagtattcgttagtaaccttttgttttcagtt
gatgaggagcggctcaagcagactttctcaccgcttggcgacataaccgaagtaaggctt
gtcaaaaaccagatggggaaatcaaaaggattcgcgtacatcgagtttaagaaccaggcc
tcggtacaagctgccctgtccatggacaggaccaaggtaaatggcagaccgatgtttgtt
tcgccttcggtggacaaatctaagaatccaacgcaatttaagtttcctacgactctcgac
aagaaaacattgtttgtgtccaatcttcctttcgaagttaaagagtcagagttggagaat
ctgttcgaaaagtatggaaaagtgaagcaaattcgtctggtgactaacagagccggtaaa
ccgaaaggatttggttacgtagagctagaagatgagacaggagcatcagcggccattgta
gctttggacggaagccaggtcggagacaggcagatttcagttgctgtgtcaaatccaccc
agcagaaaacccaggcagcccggggccgaccaacagcaaagacagaaagaacagccggga
agtcgtggccgagcaagaacccagctgcaactcatccccagggcactgcagaagactgcg
tccactgcaccagcttcttcgtcagataactcaaccgtatcgagcgaagaaaagaccgaa
gccaaacctggcgctgaagttaaccaaggttttagtaatgagtattttagaagccttttg
cagaagaagaattaa
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