Pocillopora damicornis (lace coral): 113678189
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Entry
113678189 CDS
T05773
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdam03016
]
113678189
Enzymes [BR:
pdam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
113678189
Transfer RNA biogenesis [BR:
pdam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113678189
Prokaryotic type
113678189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
113678189
NCBI-ProteinID:
XP_027050860
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MKANIEQGKDSSIEEASEDDPDILRNTCASEKDVGILEFVSNLPGFHGVLKQRYTDFIVR
ERDLLGNLVRLSDTSLPRKEKNKDFGLDVLSEEEKEKIQQVIDDKEKKTLATLSPDDDKD
HRRLVHRTIRENFAFLDSDTVDVGNQKAVRVFHKRDSSGRQRNSRWPSEIENYCWFVLYK
ENKDTMDAINLLSKLLRIKAGIFGYAGTKDRRAVTTQQVSVYRVRAEQLQELNSSLRNLC
LGNFQYCKEPLKLGSLSGNHFIITLRNVVGDHREIEESLKSLKINGFINYFGLQRFGTTS
VPTHKIGCALLLSNWSEAIDLLLNPRSGESDDLTAARQHWKDTHDAKETLKKLPKRKGIE
SDLLLGLVRHGPSGLVKALQSISRNTRLMYVHAYQSYVWNYVASKRIKEHGMKPIIGDLV
VASKSAASCSLDTGTSGPQDTVEFISEPSRTSVTVLTRDLLETGQFTIHDVVLPLPGYDV
VYPDNSLKDEYRKIMANDGLDIDNMRHKVKDYSLSGAYRKLLVKPSLMSWRWLRYNDVKQ
PLVVTDKEALSGALEPESVPDGKYWALQLEFTLPTSTYATMALREVLRSDTSSAYQSTLN
QE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaatatagagcaagggaaagattcatcgattgaggaagcatctgaagatgac
cctgatatcttaagaaatacttgtgcttcggaaaaggacgtaggaattttagaattcgtg
tccaacttacccggatttcacggagtcctgaaacagagatacacggatttcatcgtcaga
gagagggaccttctgggaaatcttgtgcgactatcagatacatctttacctcggaaagaa
aagaacaaagactttggacttgatgttttaagtgaagaagagaaagagaaaattcagcaa
gttattgatgataaggagaagaaaacccttgcgactttatctcctgatgacgacaaagac
catagaagattggttcacagaaccattagagaaaactttgcttttttagatagcgacaca
gttgatgtgggaaaccaaaaggcggtcagagtatttcataagcgtgattctagtggcagg
caaagaaacagccgatggccttcagaaattgagaattattgctggtttgttctttacaaa
gaaaacaaagacaccatggatgcaatcaatttgttgagcaaacttctcagaatcaaggca
ggtatttttggttacgctggaaccaaagatcgtagggcagttaccacacagcaggtgtct
gtgtacagagtcagggctgaacagttgcaggaattaaactcaagtcttcgcaacttgtgt
cttggcaacttccagtattgcaaagagcctcttaaacttggctctttatcagggaatcat
tttattatcactctcaggaatgttgttggggatcacagagagatagaagaaagtctaaaa
tcacttaaaatcaatggttttataaattactttggattgcaaagatttggaacaacctca
gtcccaacacataaaataggctgtgcattgcttctcagtaactggtctgaggctattgat
cttcttcttaatccacgttctggtgagtccgatgacctcacagctgctcgacaacactgg
aaagacacccatgatgctaaggagactctgaaaaaacttcccaaaagaaagggtattgag
agtgatcttttacttggccttgtgaggcatggaccttcaggtttggtgaaagccttgcag
tccatctccaggaacactagactcatgtatgtccatgcatatcaaagctatgtatggaac
tacgtagcatcaaagcgtattaaggaacacggaatgaagccaatcattggcgacctggtt
gtggcttcaaaatcagcggcatcatgttctttagacacaggcacttcagggccgcaagac
accgttgaatttatttccgagccaagcaggacatcggttaccgttcttaccagggatttg
ctggaaacaggtcagttcacaatccatgacgttgttcttccacttcctggatacgacgtt
gtttaccctgacaacagcttgaaagatgagtacagaaaaataatggccaacgatggactg
gacattgacaacatgaggcataaagtgaaggattactctctgtcaggcgcttatcggaaa
ttactcgtcaagccgagcctaatgagctggcgctggttgcgttacaatgacgtcaaacaa
ccgttggttgtaaccgacaaggaagctctttctggtgccctggagcctgagtcagttcca
gacggaaagtactgggcgctgcaattggaatttacactacctacctcaacttacgctaca
atggccttgcgtgaagttctgaggagtgatacgtcatctgcttatcagtctactcttaac
caggaatga
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