Pocillopora damicornis (lace coral): 113678354
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Entry
113678354 CDS
T05773
Name
(RefSeq) HEAT repeat-containing protein 1-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113678354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113678354
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113678354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT
DUF1419
Sec10_HB
RNase_E_G
DUF7772
Motif
Other DBs
NCBI-GeneID:
113678354
NCBI-ProteinID:
XP_027051039
LinkDB
All DBs
Position
Unknown
AA seq
2125 aa
AA seq
DB search
MTSLAKQLQQLQIPGSLPSTATAKASKKSSLLFDSKEAADIDNETVFSIGLNGLEELKVI
EPAFKMFEKSLFGDNSMSLERSLQTKDVNEKLDKHISKFLQYLSPYFLLKPAHKVLEWLI
RRFQIHVHNVDSLVTCILPYHETNLFTRVLQLLSIKDPSSKWNWLSPIKKAGVPLSKTAF
LQHCITDTAFFSLICDMVMEGIKLEIPPSSSRVLFTFYTSTVVGVLDMMPSVTEKFMTLL
LPHLLAGIKSGLSELIASSYIITAQLCFRCSMEKELVKSLSDSICKSIKPGFATEGLSCL
TYTCQSQGLKKLSKRSFKALLKLPRLVDILHNLSVTHSINPLLEAFVPQLVSNGIKQELS
EESDTRALLEIVWELLREVDFEPALVTVIGRTLLEEYCDARKALGADEGRIGNLNEKVKD
LVQALEKRYPTELERAVEAHLQALKNTEDMTEGDAGIVSEEGSLWTMDLVIPDSNTTLVL
SLHHPQAQVREMAIKRLGELLADKGGLSEDKQFISYSLLSRLQDDDPSVVACVLKLGQGL
VDNLPIDQFLKEMFKLLDKKSEEWDKVREEASLLLVGDWVTCAVPSLVAEVMFGLLPRLL
LHRQSHKMAVQLSLIVSQSELASLHPLLTGMEDFVQKKEWKSCTKIVDLDKLALASSLLI
SWLGDNLVKLDEEQCVEMVQSMIGYAKTLSDESLFYPLLNCLLSRVIATATEECKIKFCQ
IITEYILPDIWKVTRLPGNYEPLKDEESGNKDTTPGHVVPFSQLKCLVKFLGKHSNKRLN
HSKGAITLWLCKILIKNIPTVPCALSEQWWPEADGNNPEGIYTKLLTMLFEAVAFGSGTS
TAHQDLFKELLQDLFQCHLPEKLVLLKFLGHLWCKNLHQGGESGLALLQVQCLHIATACF
GSISGKAVKELAKTTCSVVPSLMVPLCSPVSAVRKSAVACIKIIKSKLSSVQACPVTALL
DVLKDSAEELSADSEQLHRVLGEFFAPAVSRGKPHSKSSHNKIIKNTLDFLLQHVASSET
SSFVRRTILSSLRSVTTQEMLQTLLPLVEKLLDKCEDSKALLHEDESILLQLILQKYTPD
TAALLQEESKCWKEMLRVLSLRSAVCPGHPAPMLTMIGQITNRFFQAIPAEGVKQHLMKI
FVDTMLEAKDVVIGNAAKNSLLKLTLTADLITEELCKLNSNTDKEPKKKKVKKARKGEQD
DENEGAVQLQRVTVVLELLQSKINIEEPHRLLPTLFGTLTRCVELDHSQTASEYIMQLVF
SLINNICHLVPEDQFDVELIVQCIRSSENPRTHTQALLLLATSAKLFPEKVLHNVMSIFT
FMGASVVRQDDSYSFEVITKTLDTVIPALIQAGEKQQLPQLTKKDSASLDDIVAMLIRVF
VDASPHIPEHRQLPLFAHLIGTVGSTQFLHTVIILLLEKQRGKTSVAKKPLGADFCLSLC
HCFHVNVQVEAMLKLLQFIDQLPLAKPEVRQKPRMARRSARVFLAVTPLFDVDTHSAKHL
RQFKYTSISVISSLLDSDEFVNKVHVEEEMLDFLFLSFKYIYFSCFIFCFCRLLQDTLNF
MTKTAQHGDQAATDVTGKFWKAFLHKTYEIIDKVNLLLPASVFFDVIEKLLHSSNGTVKR
KAMELLNCKLSNNVGVHSDEQIKALLNLVTELLAISGGTGESEGSVINRQTALFPYFFDL
KVASSALLCAAEVLGGLKTHCIPFLPKLMPSVLKLLKRNQKERNSLLTLCGITALYKATE
ALPHFLSPHLVDILIMVTQPSLTGGEVTEVQQEKEEVTKQSTVDVQLKDRVVLLRKELAC
NIAPRVLISAVSDCYNSIVNKHKERVFVLMDVLAECVKAMKKEDIKTYHSNLFTLFLEAL
DFRTHHNQETERSVIEAFLCLVIKMSEASFRPTFLRLIDWATRPSSSKERLIIFYRLCDS
VANKLKGLFVLFAGYIMKNCASLLDAANISKTEENIFPDESPNRNMHKTCLLLNYMLDCL
HKCFMYDTHGFLDSDRFQCLMQPLVDQIENLLGGEDTFRERLTNHLAQCLAQFAVASGSD
AQWKPLNYQVLLKTRHSSATVRFAALKVLEGFHTRLGEEFMVLLPESIPFLAELMEDECF
EVEQQCQHLISEIEQVLGEPLQKYF
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggcaaaacaactacagcaactgcaaataccaggcagtttgccttcaaca
gccactgctaaagccagcaaaaaatcatctctgctatttgattcgaaagaggcagctgac
atagacaacgaaactgtgttctctatcggtttaaatggcttggaagaattgaaagttatc
gagcctgcctttaagatgtttgaaaagtcgctttttggcgacaattcgatgtctttggag
agatctttacagacaaaagatgtgaacgaaaagctcgataagcatatttcaaagtttctg
caatatttatcgccatacttcttgctaaagccagctcataaggttttggaatggcttatc
cgaagattccaaatccacgtgcacaatgttgatagtttggtcacttgtattttgccttac
cacgaaacaaacttgttcactcgtgtgttgcagctactttccataaaagatccttcctca
aaatggaactggctcagtccgattaaaaaagctggagttcccctttctaagacagctttc
ttacaacactgcatcactgatacagccttcttctctctcatttgtgacatggtaatggaa
ggtataaagttggaaatccctccatcaagctcgagagttttgtttacattttatacctca
actgtagttggagtcttggatatgatgccaagtgtgacagagaaatttatgactctgtta
ttgcctcatttactggctggtattaagtctgggctctcagagctgatagcatcatcgtac
attattacagctcagttgtgttttagatgcagtatggagaaggaattggtgaaatcccta
tctgacagcatatgtaagagcattaaaccaggatttgccactgaaggtttgtcttgtctt
acctacacatgtcaatctcaggggttaaagaaattatcaaagaggtcttttaaagcactt
ctgaaacttccaagactggtagatattcttcacaatttgtctgtgactcatagcattaat
ccattacttgaagcatttgtcccacaacttgtatccaatggaataaaacaggagttatca
gaggagagtgacacaagagccctgttagagattgtctgggaattacttagagaggttgat
tttgaaccagcactggtcacagtgattggcagaacacttcttgaggagtactgtgatgcc
aggaaagcattgggtgcagatgagggtagaattggaaacttgaatgaaaaagtgaaagat
ttggtgcaggccttggaaaaaagatatcctactgaactagagagagctgttgaggcacat
cttcaggcactcaagaacacagaggacatgactgagggggatgctggcattgtttcagag
gaaggttccctctggacaatggatctggtcattcctgattcaaacacaacactagttttg
agtcttcatcatcctcaagcccaagtgcgagaaatggcaatcaaacgtctaggagaacta
ttagcagataaagggggcttgtctgaagacaaacagttcatcagctattcattactttca
cgacttcaagatgatgatccatctgtggtggcttgtgtgcttaagttgggacaggggctt
gtagataatcttcccattgatcagtttttgaaagaaatgtttaaacttctggacaagaaa
tcagaggagtgggacaaggtccgagaggaagcctctctattgttggttggtgactgggta
acctgtgctgtgccatcacttgtagcagaagttatgtttggtttattgcctcgtctactg
ctccatcgtcagtctcacaaaatggcagttcagttgtcattaattgtcagccaatcagag
ctggcttcactgcatcctcttttgactggaatggaagattttgttcaaaagaaagagtgg
aaaagttgcacaaagattgttgaccttgataagcttgccttggccagcagcttactgatc
agttggcttggagataacttggttaagttggatgaagaacaatgtgtggagatggttcag
agtatgatagggtatgccaaaactctttcagatgaaagtcttttctaccctctcctgaat
tgtctgctcagtagggtcattgctacagcaacagaggagtgtaaaattaagttttgccaa
atcatcacagaatatatcttacccgatatttggaaagtgacaagattgccaggaaactat
gagccactcaaggatgaagagtcaggaaacaaagacacaactccagggcatgtggttcca
ttttctcaactaaaatgtttggtgaaatttcttggtaaacacagcaataagcggctgaat
cattccaaaggtgccattacactgtggctgtgtaagatattgataaagaacatccctact
gtgccttgtgctttaagtgaacagtggtggccagaggcagatggtaataacccagaaggc
atttatactaagcttctgacaatgctgtttgaggctgtagcatttggaagtggcacttca
acagcacatcaagatttattcaaagaattacttcaagatctcttccagtgccatttacca
gaaaaactagtcctgctaaagtttctaggacatttatggtgtaaaaatctccaccaggga
ggggagagtggattagctcttctgcaagttcagtgtcttcacatcgctactgcatgcttt
ggctccattagcgggaaagcggtgaaggaactggccaagacaacatgttcagttgtacct
tctcttatggtgccgctgtgcagcccagtctctgctgtaagaaagtcggctgttgcttgt
ataaagattatcaagtccaaactatcttctgtccaagcctgtccagtgacggcacttctt
gatgtcttgaaggacagtgctgaagaactttctgcagattccgagcagttacatagggtt
cttggtgagttctttgcaccagcggtatcccgcggaaagcctcactccaagtcatcgcac
aataaaatcattaagaacacgctggacttcttgttacaacatgtagcatccagtgaaacg
tcttcctttgttagacgtaccatactgtcatcgttacgcagtgttactactcaggagatg
cttcagaccctgttgccgctcgtggaaaaactattagacaagtgcgaggatagcaaagcc
ctcttgcatgaagatgagagtattctgctacaactgattttacaaaagtacaccccggac
actgctgcactgctgcaggaggaatccaaatgttggaaagagatgttgagggtgctctcc
ctgagatctgcggtctgccccggacatccggcaccaatgttgactatgattggccagatt
acaaatagatttttccaagcaatcccagcagaaggagtaaagcagcatctgatgaagatt
tttgtggacacgatgcttgaagcaaaggatgttgttataggaaatgctgccaagaattct
ctgttgaagcttactctgacagcagatctgattactgaagagctatgtaagctgaattcc
aatactgataaagaaccaaagaagaagaaagtgaagaaggcgcgaaagggtgagcaagat
gacgagaacgaaggagcagtgcagctacaaagagtgacagttgttcttgaattgttacag
agtaagattaacattgaagaaccacatcgacttctaccaaccttgtttgggaccctgacc
aggtgtgtagaactcgatcacagtcaaacagcttcagagtacattatgcagctggtattt
tctctcatcaacaacatctgtcatctcgttcccgaagaccagtttgacgtggagttgata
gtccagtgcataaggtcatcagagaatccgcgcactcatacccaggctttactcctgctt
gcgacttcagccaagctttttccggaaaaagttttgcacaatgtgatgtcgatattcact
ttcatgggcgcgagtgtcgtccgccaggatgatagttacagttttgaagtcatcactaaa
acactggacacagtgattcctgcgttgattcaggcgggtgagaagcagcagttaccacag
ctgaccaaaaaggactcagcgtctctggatgacattgtggcgatgcttatcagagtattt
gtggatgcctcgcctcacattccagagcaccgccagcttcccttgtttgctcatctcatc
ggcactgttggttcaacacagttccttcacacagtgatcattctcttactggagaaacaa
aggggaaaaacctctgttgccaaaaagcctcttggagcagacttttgtctcagtctctgc
cattgcttccacgttaatgttcaggtagaggccatgctgaaactcctgcagttcattgat
cagttgccgttggcaaaacctgaagttcgtcaaaagcccaggatggctagaagaagtgcc
cgtgtattcctcgctgttacgcctctgtttgatgtggacactcactcagcgaaacacctc
aggcaattcaaatacacatcaatcagtgttatttcttccttgctcgacagtgacgagttt
gtaaacaaggtccatgttgaggaagaaatgttggattttctctttctaagttttaagtat
atttatttttcttgttttattttttgtttctgcagactgttacaggatacattaaacttc
atgactaaaacggcgcaacatggtgatcaggcagctactgatgtgactggaaagttttgg
aaagcttttctgcataaaacttatgaaattatagacaaggtaaatctccttttacctgcc
tcggtatttttcgatgtcattgaaaaacttcttcatagcagcaatggaacagtgaagcgt
aaagctatggagttactgaactgcaaactaagcaataacgttggagttcattctgacgag
cagattaaggcgttactgaacttagtaaccgaactcctcgccatatcgggaggtactggg
gagagtgaggggtccgtcattaacaggcagacagctttatttccttacttctttgacctc
aaggttgcttcaagcgcgttgctctgtgcagcagaagtgctcggtggacttaaaacgcac
tgcattcccttcttgccaaagctgatgccttctgtactgaaactgctcaaaagaaatcaa
aaagagaggaacagcctgttgactctgtgtggtataacagctttgtacaaagccacagaa
gcacttccacattttcttagtcctcatttagtggatattctgattatggtgacgcaacca
tctcttactggaggagaggttacagaggtccagcaagaaaaggaagaggttacaaagcag
tcgactgtggatgtacagttaaaggatcgtgtagtcttgctcaggaaagaactggcttgt
aatattgcaccccgagtgctgatatcggcagtgtctgattgctacaacagtattgtcaac
aaacacaaggaacgtgttttcgtgcttatggatgtcctggcagaatgtgtgaaagccatg
aaaaaggaggatattaaaacctaccattccaatctctttacgctgttcttagaagcgttg
gatttcagaactcaccacaaccaggagacagagcgtagtgtgatcgaggcatttttgtgt
ctcgtgatcaagatgtctgaggcttcttttagaccgacgtttttaaggttgatagattgg
gcgaccaggccttcgtccagtaaggagcggttgattattttctatcgtctttgcgacagc
gtggctaataaactgaaaggattgtttgtgctgtttgcgggttacattatgaagaactgt
gcttctttgctggatgccgcaaacatctccaaaactgaagagaacattttcccggacgag
tctccaaacagaaacatgcataaaacttgcctcttgttgaactacatgttggattgtttg
cacaaatgcttcatgtatgacacacacggattcttggacagcgatcgtttccagtgtttg
atgcagcctcttgtagaccagattgaaaacctgttgggaggagaagatacctttagagag
cggcttacgaaccacttggcccaatgcctcgcgcagtttgccgtagcctccgggagtgat
gcacagtggaaaccgctgaactatcaagtattactgaagactcgacacagctctgcaaca
gttcgttttgcagccctcaaagttctagagggattccacacaagactcggagaggagttt
atggtgcttttaccagagtcaattccattcttagcagagcttatggaagatgaatgcttt
gaggtggaacaacaatgtcagcacctcatctcggaaattgagcaagtcttgggagaacca
ttacaaaaatatttttaa
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integrated database retrieval system
