Pocillopora damicornis (lace coral): 113678747
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Entry
113678747 CDS
T05773
Name
(RefSeq) nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdam03037
]
113678747
Cilium and associated proteins [BR:
pdam03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113678747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASH
NAM-associated
Motif
Other DBs
NCBI-GeneID:
113678747
NCBI-ProteinID:
XP_027051455
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MAEEEQEENWPEFFENNRLIPVHPNRRKSGSHSKASVPFCLVLKSVIGISPPQVYDVVSQ
DIEFQLRLTLYDAAYKCFFGSTWLGPFFPSSGKENGRHKIVFEETVYLYSSLHDITCVGV
VEVIGEVNGQSFGCGWTLIRIFDRLSELSETTSGQSTPKSIPLYHGSPAGLLCISETIEE
SSSLLPIEACTLSFVLQIHPPLEKVFHLIPENAIMSGDDFVPGILEPQPDGSGIVDILKK
PRLAKTTPSFVNKLSIMLYPSVEEFEDELQQTFNQDRLHRNNIIPDDGLQISIVERRLKV
SVHNGWTYVSEPHIVYLEPEYEGGKSGRKSPASQSSLRGKILSLALRSRLELKELVHHPL
FAIIFELEYVLSEPFAQPLIETKRKKPSLSGSLMRSQNQTVTVKWALWLPFEGGSPEERE
TSLELTGGCEGFPGDKLVFAKKLLQPPGKKAPKSGGVVKFLFTQQRRRGSSLRSSTQGSQ
MLGVPTSPGLPFPGPFDNARGMFGSVNNTPGGGYQGMLLTPGVASRPPLPPGNRLPEEYP
VVPPRDPLFQFTSSGMRPSAPDPVIHLSELPQSTVHSPLILTGPGTSPASAPSTMTRAAY
TRLSSAGFPSITDRRGNSPQVIDHREELPIHLDTETVDQLLSNEIVIQFLALSRCYNRSA
FFSFQFYRFPQVTTERVYLKDTDGQSQGIPCVLQKFNKDGLPSDESPGLMLRYLLDPSYM
QPGEGRVFSHYLLSQSLHIDVWDGDSLLLIGSTSLKLKHLLRQGREAVIVAHELDVVSTE
FSEEAAMQSGDMTRTGIKSAVEAKLHLRVANIGHTSEGPKGKLGTVPKKLSTVVISETVR
ETGTANTLTGNKSTKIKAKQMAECDAELSAVLFSRQEKIAKDDQPVREANAIRKRKLERM
QAVRQIQGADTSTGNLIIQKEEKLQRTRDLKTIQLYREKLRHERILSSLAGNITTSHTIY
PSFGRVEFFEFVLRNPYSTDQTVTIYCDDNELRVVTDTREWRHFKRKTETRSALEENMFD
TASTSPYPQVFLRPRETVHIPFKFQTFRADQSVPEQGPSHPLKQQAQTYLKTSISEENSL
KPRQIKVAFRNTDERPIAILNLQVEPRPHVIDRTFRFYHAEQSFLKKTIRLPPWRSLPGA
PVMDDNTQPQVHVRCSDVNAVCEARKMPSGEPQDVFLKIACGPSPSLKRFFVLLYIDPFL
AEPCQTWQFYVHSLQRIDLSAVQGQSSRLSVILRGTQSSRLVQCFSSHPEELQVKPTDPI
MLMANAVHEVHLTLRPHTSGSMRYMYVNVVDVEFHQLVRTWLVCASCQMPVISKSFELQI
QVGGGKGSNKRVSFTNPYPTKKTFHLKTNRPDMLQFKESIIQVGTGESHSIGLRFTPQQF
PGKSEILIFINDSEDKNEETFSINAVYT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaacaggaagaaaattggccagaatttttcgaaaacaaccgtctcatt
ccagttcatccgaatcgacggaaatcagggtctcactccaaggccagtgttccattttgt
ctcgttctcaagtccgtgattggtatatctccacctcaagtttatgatgttgtttcccaa
gacatagaattccagttgcgattgacactgtatgatgcagcttataaatgtttctttggg
agcacatggcttggacccttttttccaagtagtgggaaggagaatggcaggcacaaaatt
gtctttgaggagacagtatatctttactcctctctacatgatatcacatgtgttggggtg
gttgaagtcattggggaagtgaatggtcaaagttttggttgtggatggacactaatacga
atttttgacagactctctgaattatcagaaacaacttcaggccaatccactccaaaaagc
attcctttgtaccatgggtcacccgctggtctgctttgtatctctgaaacaattgaagaa
tcatccagtctactcccaatagaggcatgcaccctgagttttgttcttcaaatccatcca
cccttggaaaaggtttttcacctgattcctgaaaatgccatcatgagtggtgatgacttt
gtgccaggaattttggagccacaaccagatgggtctggaattgtagatattttgaagaaa
cccaggctggcaaaaactacaccaagttttgttaataagctgagtattatgctgtatcca
tcagttgaagagtttgaagatgaacttcagcaaacgttcaatcaggataggctacacagg
aacaatattatacctgatgatggactgcagatttcaattgtggagagaagactaaaggtc
tcagtacacaatggatggacatatgtaagtgaacctcacatagtgtaccttgaaccagag
tatgaaggtgggaaatctggaagaaaatcacctgcttcacagtcatctttaagaggaaaa
atcctctccttggcccttcgcagtcgactggaactgaaggagcttgttcatcatccatta
tttgctattatctttgaactagaatatgttttgtctgaaccatttgctcagccactaatc
gagaccaaacgtaaaaagccctctctgtctggcagcctgatgcggtcccagaaccagact
gtaacagtcaagtgggctttatggcttccatttgagggtggaagcccagaggagagggag
acctcattggaacttactggaggctgtgaaggtttcccaggtgacaagctggtgtttgct
aaaaaactactacaaccacctggaaagaaggcacccaagtctggtggagtagtaaagttt
ctgttcacccagcagcgcaggagaggaagcagtttgcgctcttcaactcaaggatctcag
atgcttggggtgcctacctcccctggtcttcccttcccaggccccttcgataatgctaga
ggaatgtttggttctgtcaataataccccagggggcggatatcaaggaatgttgctcaca
ccgggtgtggcatcaagacctccacttccaccaggaaacaggctgccagaagaataccct
gttgtacctcctcgagatcccctctttcagttcacctcgtctggtatgcgtcccagtgca
cctgacccagtgatccacctgtctgagttaccacagagcactgtacactctcctcttatc
cttactggaccagggacaagtcctgccagtgcaccatcaacaatgacccgtgccgcttat
acacggctttctagtgctggatttccgtccattactgaccgccgtggtaactctccacaa
gtgattgatcatagagaagaattaccaatacatttagatactgaaacagtcgatcaactt
ctgagcaatgagattgtcattcagtttcttgctctgtccagatgctataacagaagcgct
ttcttctcctttcaattctaccgatttcctcaagttaccactgaaagggtctacctcaaa
gacactgatggtcaatctcaagggattccttgtgtgcttcaaaaattcaacaaagacggc
ttgccctccgacgaatctccaggcctgatgttgcgttatttgttggacccttcatatatg
cagccaggagaaggccgtgtgttcagtcattacctgttgagccaatcattgcacattgat
gtgtgggatggtgactcacttctccttataggctcgactagtttgaaactcaagcattta
ctacgtcaaggtcgtgaagctgtaatcgtggcgcatgaattggatgtagtttccaccgaa
ttttcggaggaggcagccatgcaaagtggcgacatgactcgaactggtatcaagtctgcg
gtagaagccaagctgcatctcagagttgcaaacatcggtcataccagtgaaggaccgaag
ggaaagctaggaactgtccccaagaagctctccactgttgtaatatcagaaactgtaaga
gaaacaggaacagctaacacactgactggaaacaaaagtaccaaaataaaggccaagcaa
atggcagaatgtgacgcagaactttcagctgtgttgttcagcaggcaggaaaagatagcc
aaagatgatcagccagtcagagaagctaatgccattagaaaaaggaaacttgaaagaatg
caggcagttcggcagatccaaggagctgatacctctacgggcaatttgataattcaaaaa
gaggagaaattacaaagaacacgagatcttaaaaccattcagctttacagagagaagctc
agacatgagaggattctctcttcgttagcagggaacatcacgaccagccacacaatctac
ccgtcattcggtagagtagagtttttcgagtttgtgctgagaaatccttactccaccgac
caaactgttaccatttactgcgatgacaacgagctcagagtggtaacagacacaagagag
tggagacactttaagagaaaaacagagacgcgttcagctttggaggagaacatgtttgac
accgcctctaccagcccctacccacaagtgttcctcagacccagggaaactgtacatatc
ccgttcaagttccagacctttagagcagatcaaagtgttcctgaacagggcccatcacat
ccgctaaaacagcaggctcaaacctatctaaagaccagcatatcggaggaaaatagtcta
aaaccacgtcagattaaggtggcattcagaaacacggatgagcgtccaatagctattctt
aatcttcaagttgaacctcgaccccatgtgatagacagaacgttcaggttctaccacgca
gagcagtcgttcttgaaaaagaccatcagactacctccctggcgatcattaccaggcgcg
ccagtaatggacgacaacacgcaacctcaagtacatgtacgctgcagtgatgtgaatgct
gtttgtgaagctagaaagatgccgtcgggtgaacctcaggatgttttcctcaagatcgca
tgtggaccctctccttctctaaagaggtttttcgttctcttgtacatagatcctttcctc
gccgaaccttgtcaaacatggcagttctatgttcattcattacaaagaatcgacttgtct
gctgtccaaggtcagagcagtcgcctgtctgtgatattacgtggaactcagtccagtcgt
cttgttcagtgtttttcatctcaccccgaagaattacaggtcaagcccaccgacccaatc
atgttaatggcgaatgctgttcatgaagtccatctaacactacgaccccacacgtccggg
agcatgcgctatatgtacgttaacgtggttgatgtggaatttcatcaacttgtgagaact
tggcttgtgtgtgcctcttgtcaaatgcccgttatttctaaatcgtttgaactccagata
caagttggcggtggaaagggttcgaacaagcgcgtatcattcaccaatccttatcctacc
aagaagacgttccatctgaagactaacaggcctgacatgctacagtttaaggagagcatc
attcaggttggtaccggagaatcgcatagtatcggtcttcgcttcacaccacaacagttc
ccaggaaaatctgaaattctcatcttcattaacgactcagaagacaaaaatgaagaaact
tttagcatcaatgccgtctatacgtaa
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