Pocillopora damicornis (lace coral): 113678902
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Entry
113678902 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113678902
Membrane trafficking [BR:
pdam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113678902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_M
VPS13_N
WWE
Motif
Other DBs
NCBI-GeneID:
113678902
NCBI-ProteinID:
XP_027051620
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MQFVEPLTSPQSTQYVQETAQRAVTEQVESIHSQGTRIGLKVAISAPLVIIPRHSRSADM
LIVDLGHLDLQNEFDVLPTSLNDENKEAVFDIMELSLQSLQLARGVMDTSSSSVIKRHLI
EPIKLEANIKRSLLPSCNEIPIIDCSATLDFVKMNLGRQDYHVLTTLFQENMKEAESVIL
EDQTRLDQSLAEEQEERIDPSTVTNISSEPGVPEETAKNVWDRMVFSFDLAGASLILYNN
ETPLDPFDTQSSVCDPATKLCLCHVEESVVTVVLPSDSSVQIHCVLNGCVVEDAREGTIS
AFPRLVDKKMATHSGVRTSSSSKEMCDVLFCQLPSGEMKVQVSLQNATIFVNFPFLFILL
EFITIPPSDVNHPREPQVSVVSQTSLDASGVRDPETPREGRDAQIHRTESGDVTSTDAPS
QVDAAASPTQETQLKIVVHGVVEDPNIVLLSDATNKESEALIVQAKVKFDYTLEGVKQSL
SADLKNLQMQAAQFPDVKRTSYKVLNPCSLSFKYLTPASTEGGQDISITLEEMVFEFSPG
LFTTVSNVVTALTGQQKVDESVQTVGDEVVSAPADLWESKPASAEYWYKKKAIEDAKPKL
VIRRASGDKLSLTIKEVQLVLVNEVEGAHIPLLLIRSCAKGKVFDWSAQLKVEADVAAQV
CYYNECLAVWEPLLEPVVVEDQKTMWEVQLKFFLADGYVSSFSPKDSELCDGTPRDVTNA
HQTGDATDSGLRSLAQKRSSFRRKRRLSSERRTWPRRKQKRRPRITGPATDDEGDLDFNG
ALTTFIQSTQTAFMDPSLEVESDSAIDVVDAPQDGVGAPSADHDDKPTQAMYMVISSHDV
MQLTVTSTAVKILSELSELWTIDRTKKLRTVPLATFVIHNELGIHAAVTVSHKLQVSDTE
QLTVRQRIPKLPTIGNSGLADVAVDLANKTQRYPRDDFVRSITEPVFNRLREKLYKIRRK
RTSSDPVTLDAIRQRKLSLQGAVSFQIGPEEFRKKLALRKGLSLDSVMTQTDGNTDTQQT
RTELSSERDKVKVRKESEEETLNALPHLEEREGEDSLAETQVGHAIANIGSLVGGLLSPH
HERKNKDKRRGKFGSDDATYDDNIISLTVDGFYHMNVISVSRSGSFLHELSPRDAPLCEA
KHKWFVVVQVDIKRGRKTVTIRSPLRIQNHLHVPVDIFVKRRDSLESGEDHPFKLFSVES
GGVQNVPLHTAYNEELFFKPGGTDFDISSSSISWRKFSTGEPSHVLSCSSTITSESSSPF
FIKALCLTDSLNKLPTSDDSPHHVIHLYPPLVVQNKLPFELVLSTEGGGGEGKVLSAGDK
VTFVNVCPGDDCKITVTLKDYGEANWVGDIFVKKQRHKSRQLLMRSQIDTSKELSLGVKS
MPQQGTRELLIYSPFWLINKTGLHVEYRVSRCEQVYRQSAVEQHPLLFNFTEKTYRKAKI
RLPGHPWSNKFSLDAVGDSGKVTCKGSDSKRFEFILQIEMSRTGLTRVVTLTPKYVIINN
TEISFSFIENIDRKALWFVVEPGESKPFWPNDKSSSIVLKPTMSKFISKPFSFDSSHTTV
LRIPDWQALTVDVHGEVEEAVTTVVVSPYSPGIATIRIENLCDDIPIRFHQKGCGQVTLL
DSKQMILYTWDDPLGVRKLLWKPFKGLDKPIEAQVDEDSFGEIRMELDEISPPVKDDRNQ
LEDRDSTCGLFCGSSNAVPVGIDEAEWDTVDGPVVHRVKKTIYWVSVMDGLQRVLIFADD
ENLSCLARKCCDSEVVTMEIFMSLDGVGLSLVNSKPDEVAYITLSSSSSVWQVKGSSGKW
KTLNLELSTWLEDAWRNNAEEIALEDREVNLNSMTMTRPYSGALQRLFEPALWLNYSRSD
HYHSLHCRMHRIQVDNQQFGTVFPVALYPSPLPSSIIQRTGLKPFIEVSVIYHHVPKEGM
HHIKYAKALVQAMNVRIDKGFIISMASFFSQQKELLEEENYFEEDMKRCAVPLRETKAVK
VCIG
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgttgagcctttaacaagtcctcagtcaactcagtacgtacaagaaacagca
caaagggcagttacagaacaggtggagtccatccatagtcaaggaactcgcatcggctta
aaagtggccatcagtgcccctcttgtgatcattccacgtcactctcgctcagcggatatg
cttattgttgatcttggacatttggatcttcaaaatgaatttgatgttctccctacatca
ctgaacgacgagaacaaagaggctgtattcgatataatggaattgtctcttcaatcgctg
caactagcgagaggtgtgatggatacaagttcgtcttcggtgatcaagcgacatctcatt
gaaccaataaaactagaggcaaacatcaagcgttctctattaccttcttgcaatgagatt
ccaatcatagattgctcagctactctggactttgtcaagatgaatctgggtcgacaagat
taccacgttctcacgacactttttcaagaaaatatgaaagaagctgaaagtgtgatactg
gaagaccaaacgagacttgatcaaagcttggcagaggaacaagaggaacgtattgacccg
tctactgtaacaaatatctcatctgaacctggtgtacccgaggagactgcgaaaaatgtg
tgggacagaatggtgttttcatttgatcttgctggtgctagtcttattctgtacaacaat
gagactcctttggacccgtttgatacacagtcgtcggtctgcgatccagctacaaaactc
tgtttatgtcatgtggaggaaagtgtagttaccgtggttttgccaagtgacagctctgtt
caaatacactgtgtacttaatggctgtgttgtcgaggatgccagagaaggaacaatttct
gcttttcctaggttagtggacaaaaagatggcgacacactcaggagttcgaacatcttca
tcctctaaagaaatgtgtgacgtacttttctgtcagttaccgtcaggggagatgaaagtc
caagtgtccttgcaaaacgctaccatttttgtcaactttcctttcttgttcattttactg
gagttcatcaccattccgccatccgacgtgaatcatcctcgagagccacaagtctcagta
gtcagtcaaacctctctggatgcttcaggtgttagggacccagaaactcccagggagggg
agggatgcacagatacacaggactgaaagtggagatgtcacttctactgatgctcctagt
caagtagatgctgcagcatcgcctactcaagagacgcagctgaaaattgttgttcatggt
gtagtggaagatccaaacattgtcttactttctgacgctacaaacaaagagagcgaggcg
cttattgttcaggcgaaagtgaagtttgattatactttggaaggagtgaagcagagtctt
tcagcggatttgaaaaatctccaaatgcaagctgcacagtttcctgatgttaaaaggaca
tcttataaggttttgaacccttgttcattgtcatttaagtacttgacaccggcctcgact
gagggtggtcaagacatctctattacattagaagaaatggtgttcgaattctctccaggt
ctcttcactactgtcagtaacgtagttacagcattaacaggacagcaaaaggtcgatgaa
agcgttcagacagtgggtgatgaggtggttagcgcgccagctgacttgtgggagagtaaa
ccggcctctgctgagtattggtataagaaaaaagcgattgaagacgccaaacccaagttg
gtgataaggagagcgtctggtgataagctcagcttgacaattaaagaagttcaactggtg
ttggtgaatgaggttgaaggtgcccatattcctttgctgttgattcgctcatgcgcgaaa
ggcaaagtgtttgattggtctgctcagctaaaagttgaagcagatgtagcggcacaggtt
tgttactacaatgagtgtcttgctgtttgggagccactgttggagccggttgtagtcgaa
gaccagaaaaccatgtgggaagtgcaactgaagtttttccttgccgatggatacgtttca
agtttctccccgaaagattcagaattgtgtgacggtaccccgcgagatgttacgaatgct
catcaaactggagatgcgacagactctggtctgcgctctttggctcaaaagagatcttca
ttcagaaggaaacggcgtttgtcttcagaacggcgaacatggccaagaaggaaacaaaag
cgtcgtccacgaataaccggcccagcaactgacgatgaaggtgatcttgatttcaacggg
gccttgactacgttcatccagtccactcagacggcattcatggacccgtctttggaggtt
gagagcgacagtgccatagatgtggttgatgcgccgcaggatggagtcggggctccttcc
gctgaccatgatgacaagccgacgcaagccatgtacatggtcatcagttcacatgatgtt
atgcaattgaccgttacttctacagctgtaaaaattctatctgagctgagcgagctgtgg
acgattgatagaacgaagaaactgagaacagttcctctggcaacctttgtcatccataac
gagcttggaatccatgcggcagtgacagtgagccataagcttcaggtctcagatacggaa
cagttaaccgtacgtcagagaattccgaaactgccaaccatagggaattctggccttgca
gatgtcgccgtagacctggccaataagacacaacgatatccacgtgacgattttgtgcgt
tcaataaccgagccagtatttaatcgcctcagggagaaactctacaaaatacgaaggaaa
agaacctcatctgatccggtgactctcgatgccatcaggcagcgtaaattgtcccttcag
ggtgcagtttctttccaaatcggcccagaagaatttaggaaaaaacttgctttaaggaag
ggtctttctcttgattcagtcatgacgcagacggatggaaacactgatacccaacaaaca
cgcactgaattgtcctcagagcgagataaggtcaaagttaggaaggaaagcgaagaggaa
acgttaaatgctctaccacaccttgaagaacgtgaaggggaagacagtcttgccgaaacg
caagtgggtcatgcaattgccaacatcggttctttggttggtgggttgctttcacctcat
catgaaagaaaaaacaaggacaagcgcagaggaaagttcggctctgatgatgctacgtac
gatgacaacattatctctttaactgtggatgggttttaccatatgaatgtcatctccgtt
agtcgctctggatcgttcctgcacgagctttctccacgagatgcaccgttgtgtgaggca
aaacacaagtggtttgtcgttgttcaagtagatataaaacgcggtcgtaaaacagtcact
attaggtcaccactgcggatccaaaaccaccttcatgtcccagtggatattttcgttaag
agacgagattcattagaatcgggagaagaccatcctttcaaactcttcagcgtggaatct
ggtggtgtgcagaatgtgcctttacatacggcttacaacgaagagcttttctttaaacct
ggtggtactgattttgatatctcatcttcctcgatatcgtggagaaagttttccacagga
gagccgtctcacgtattgtcttgttcgtcaacgataacttcagagtcttcctcccctttt
ttcatcaaggccctttgtttaacagacagcttgaacaaactgccaactagtgacgactct
ccccatcatgtgatccatttgtaccctcccttagtcgtgcaaaataaacttccatttgag
ctagtcttatcaacagaggggggaggtggagaaggcaaagtactcagtgctggtgataaa
gtaacttttgtcaatgtttgtcctggagatgattgcaaaataactgttacgcttaaagat
tacggagaagccaattgggttggagatatctttgtgaagaaacaacgacacaaatcccgt
caattacttatgcgttcacagatagacacctccaaagaattgtcgcttggagtgaaatcg
atgccccaacaagggacaagagagctgttgatctactctcccttctggctcatcaacaag
actggactccatgtggagtacagggtctcaagatgtgaacaagtttatcgtcagtctgct
gtagaacaacatccacttctttttaacttcactgaaaaaacctatagaaaggccaagatc
agactgcctggacatccatggtcgaacaaattttctctggacgctgttggagattctgga
aaggtaacatgcaaaggaagtgactcaaaaaggtttgagtttatcctacaaattgaaatg
tccaggacagggctgacaagggttgtgacgttaaccccgaaatacgtcatcattaacaac
acggagatttcgttctcttttattgaaaatatagacagaaaggctttgtggtttgttgtg
gaaccaggagaaagcaaaccattttggcccaatgacaagtccagttcaatcgtgttgaag
ccaacaatgtcaaagttcatttcgaagccttttagtttcgactcatcgcacacgacagtt
cttcggattccggattggcaggctctcactgtcgacgttcatggagaggtcgaagaagcc
gtgacaactgtagtggtgtcaccttactcgcctggaattgcaacaatcaggattgaaaat
ctgtgtgacgatattccgatccggtttcatcagaaaggctgtgggcaggtgacgttgctt
gactctaagcagatgatcctgtacacttgggatgatccattaggtgtaagaaaactgctc
tggaaaccgttcaagggcttagataagccaattgaggctcaagttgatgaggacagcttc
ggcgaaattcgaatggaactcgatgaaatctccccaccagttaaagatgaccgaaatcag
ttggaagacagagacagcacgtgcggattgttttgcggctcgtcaaatgctgtacctgta
ggaatagatgaggcagagtgggatactgtggatgggccggtggtacacagggttaagaag
actatctactgggtgtctgtcatggacggactgcaaagggtgctgatatttgctgatgat
gaaaatctttcctgtctggctcggaagtgttgtgactctgaagttgttactatggagatt
ttcatgtcactggatggtgtcggtttgtcactggtcaacagcaaacctgatgaagttgca
tacataaccttgtccagttcatcctcagtctggcaagtaaagggatcttctggaaaatgg
aagaccctcaatctagagttgtcaacttggttagaggatgcctggaggaataacgcagag
gaaatcgccttggaagacagggaggtgaacttaaactcaatgactatgactcgcccgtat
agcggggcccttcaaaggttgtttgaacctgctttgtggttaaattactcccgatcagat
cactaccacagtttgcactgcagaatgcatcgaattcaggttgataatcagcagttcggc
acggtttttccagttgctctttatccatcaccgctaccttcttccatcattcagaggaca
ggactgaaaccgttcattgaagtgtcagtgatttatcatcacgtccctaaagaaggaatg
caccacataaagtacgctaaggctttggtacaggctatgaatgtgagaattgataaagga
ttcattatttctatggcaagttttttcagtcaacagaaggaacttctagaagaggaaaat
tatttcgaagaagacatgaaacgatgtgccgtgcctttgagggaaaccaaagcagtaaaa
gtttgtatcggctga
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integrated database retrieval system
